Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_O11
(481 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0417 - 16904476-16904662,16904846-16905029,16905150-169058... 32 0.28
10_08_0394 + 17535525-17535656,17537205-17538371,17540558-17541448 30 1.1
08_01_0505 - 4379722-4380795,4380868-4381008,4381099-4381270,438... 30 1.1
08_01_0506 - 4400776-4400937,4401164-4401253,4401334-4401546,440... 29 1.5
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749... 29 2.0
02_01_0302 - 2021221-2023305 29 2.0
10_08_0461 - 18113348-18113389,18113683-18114231 29 2.6
09_02_0307 + 7131031-7131326,7131414-7131560,7132579-7132711,713... 29 2.6
07_03_0429 + 18103724-18105196 28 3.4
07_01_1212 + 11560247-11560684,11560773-11560826,11560926-115609... 28 3.4
06_02_0333 + 14567509-14568081,14568109-14568438,14568642-145695... 28 3.4
02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,198... 28 3.4
04_04_1654 - 35075409-35075926,35076396-35078694 28 4.5
01_06_1561 - 38255397-38255595,38255712-38255867,38256040-38257163 28 4.5
10_08_0199 + 15721585-15722109,15722135-15722740,15723084-157232... 27 6.0
07_01_0547 + 4052618-4052659,4055575-4055741,4055839-4056556,405... 27 6.0
03_03_0258 - 15905847-15905990,15906088-15906244,15906374-159065... 27 6.0
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 27 7.9
06_01_0783 + 5857950-5857979,5859474-5860424 27 7.9
03_05_0520 + 25139314-25139364,25139580-25139711,25141594-251417... 27 7.9
>08_02_0417 -
16904476-16904662,16904846-16905029,16905150-16905897,
16906003-16906227,16906318-16906485,16906803-16907453
Length = 720
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 307 SEMNGGSPSHSPSKPMTNGSASSTPSRGERDPTEY*GNPI 426
S M+G PS SP P++ ++S+TPS R P+ +PI
Sbjct: 524 SAMDGRIPSPSPQSPVSARTSSATPSPTARTPSPAPPSPI 563
>10_08_0394 + 17535525-17535656,17537205-17538371,17540558-17541448
Length = 729
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -1
Query: 241 SVQRVWNAYRAGVSECRELRV--DEAYHSSQGCLLLSPG*RSR*YYFS 104
S R+W V E E+R + +H+ G ++ P RSR YYF+
Sbjct: 54 SGDRIWGLEMKEVGEVEEVRCLDPQLWHACAGGMVQMPAPRSRVYYFA 101
>08_01_0505 -
4379722-4380795,4380868-4381008,4381099-4381270,
4381944-4382047,4382127-4382259,4384477-4384653,
4385164-4385309,4385536-4385625,4385703-4385915,
4386090-4386182,4386743-4386937,4387018-4387110,
4387924-4388019,4388556-4388985,4389424-4390091,
4392074-4392271,4392690-4393407,4394036-4394181
Length = 1628
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +1
Query: 271 TDTIRSNILFGDSEMNGGSPSHSPSKPMTNGSASSTPSRGERDPT 405
T+++R+NI G + + G+ H PS+ + + + S ++ ER P+
Sbjct: 96 TNSVRNNITNGTTPLRVGNLRHDPSEDIRSSNYPSLYNQRERGPS 140
>08_01_0506 -
4400776-4400937,4401164-4401253,4401334-4401546,
4401725-4401817,4402357-4402551,4402643-4402735,
4403554-4403649,4404186-4404633,4405078-4405745,
4406822-4406884,4408650-4408847,4409265-4409982,
4410447-4410580
Length = 1056
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 271 TDTIRSNILFGDSEMNGGSPSHSPSKPMTNGSASSTPSRGERDPT 405
T+ +R+NI G + + G+ H PS+ + + + S ++ ER P+
Sbjct: 92 TNNVRNNITNGTTPLRVGNLRHDPSEDIRSSNYPSLYNQRERGPS 136
>02_05_1052 +
33770355-33773981,33774217-33774336,33774880-33774996,
33775322-33775411,33775971-33776078,33776304-33776351
Length = 1369
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 325 SPSHSPSKPMTNGSASSTPSR 387
SPS +PS P ++ S+SSTP R
Sbjct: 108 SPSSAPSSPSSSSSSSSTPVR 128
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 319 GGSPSHSPSKPMTNGSASSTPS 384
GGS S +PS P NG STPS
Sbjct: 461 GGSSSTTPSYPSPNGGKPSTPS 482
>10_08_0461 - 18113348-18113389,18113683-18114231
Length = 196
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -1
Query: 325 FHRSSQSLQTGCYYGWCRLSSGKQSCSRSVQRVWNAYRAGVSECRELRVDEAYHSSQGC 149
FHR+++ L GW RL G++ C R ++ A A RV + S GC
Sbjct: 80 FHRNTE-LVVALSSGWLRLGGGRRRCHRRIRVFAVAGAASGRSSVVARVVDDCDSVNGC 137
>09_02_0307 +
7131031-7131326,7131414-7131560,7132579-7132711,
7133115-7133207,7133421-7133717
Length = 321
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 414 LVFGWVPLTSAGRRRGAPVGHRLRRRM 334
LVF VP T+ +P+G RLRRR+
Sbjct: 48 LVFSAVPFTAVKALANSPLGARLRRRL 74
>07_03_0429 + 18103724-18105196
Length = 490
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -2
Query: 477 RRNHVDLAVHRFVAVSGDRVALVFGWVPLTSAGRRR 370
RR H DL A +GD A V GW P R R
Sbjct: 336 RRRHADLQ-ESVTAAAGDSKARVVGWAPQRDVLRHR 370
>07_01_1212 +
11560247-11560684,11560773-11560826,11560926-11560985,
11561084-11561227
Length = 231
Score = 28.3 bits (60), Expect = 3.4
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +1
Query: 277 TIRSNILFGDSEMNG--GSPSHSPS--KPMTN---GSASSTPSRGERDPTEY*GNPITGD 435
T S+ LFG G+PS +P+ P TN G+ SSTP+ G T G P T
Sbjct: 4 TPASSPLFGTPSTTPAFGAPSSTPAFGTPSTNPAFGTPSSTPAFGAPSSTPSFGTPSTAP 63
Query: 436 GYKT 447
+ T
Sbjct: 64 AFGT 67
>06_02_0333 +
14567509-14568081,14568109-14568438,14568642-14569550,
14569598-14569777,14570416-14570698,14571339-14571832
Length = 922
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 10 TWLLKCPSLSQRPSVSDETALFYA 81
TWLL P S++PSV ++ A F A
Sbjct: 361 TWLLPFPQRSRKPSVDEQFAHFVA 384
>02_01_0297 +
1986422-1986570,1986960-1987065,1987188-1987464,
1987805-1988305,1989010-1990016,1990131-1990781,
1991337-1991633,1991735-1992013,1993070-1993198,
1993291-1993491,1993651-1993793,1993878-1994190,
1994349-1994488,1995320-1995398,1995484-1995753,
1996208-1996425,1996521-1996632
Length = 1623
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 220 HSRLFGQIANNSASPMITDTIRSNILFG--DSEMNGGSPSHSPSKPMTNGSASS 375
+S I +S S M ++ + ++ +G D +NGG H + +TN SA+S
Sbjct: 262 NSHQIQHIGGHSNSGMHSNMLENSSAYGLSDGHVNGGMGVHGSNMQLTNRSAAS 315
>04_04_1654 - 35075409-35075926,35076396-35078694
Length = 938
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 262 PMITDTIRSNILFGDSEMNGGSPSHSPSKPMTNGSASSTPS 384
P + +++ N+ G+ NG +P +PSK S+S P+
Sbjct: 430 PTFSPSVKVNVT-GNLNFNGTAPGSAPSKDTPGSSSSRAPT 469
>01_06_1561 - 38255397-38255595,38255712-38255867,38256040-38257163
Length = 492
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 34 LSQRPSVSDETALFYAGCRVPNAPKSSISEIFSPETTEGSP 156
+SQ S++DE A +PN+PK S S I + G P
Sbjct: 79 ISQAGSINDEWADPMKNVILPNSPKESESSISCAGSNNGEP 119
>10_08_0199 +
15721585-15722109,15722135-15722740,15723084-15723273,
15723907-15724175
Length = 529
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 354 DQRERLVDAQPR*EGPNRILRQPDHRRRLQNDERPDQH 467
D+R+ +VD GP +I R H+R + ++ P+QH
Sbjct: 266 DRRDVVVDGGGG-GGPRKITRSTSHQRSVIIEDAPEQH 302
>07_01_0547 +
4052618-4052659,4055575-4055741,4055839-4056556,
4056678-4057114,4057241-4057315,4057490-4057673,
4057759-4057854,4057952-4058018,4058556-4058715,
4058808-4059199,4059254-4059300
Length = 794
Score = 27.5 bits (58), Expect = 6.0
Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 2/104 (1%)
Frame = +1
Query: 91 VPNAPKSSISE--IFSPETTEGSPVKNGXXXXXXXXXXXXXXXXXHSRLFGQIANNSASP 264
VP P +S + P + P + HS+ F +IAN+ +
Sbjct: 639 VPITPPFDVSSSLLKPPNFSSAKPPRPTKARSNSSRSSSKAPGAVHSQKFSKIANSGLNE 698
Query: 265 MITDTIRSNILFGDSEMNGGSPSHSPSKPMTNGSASSTPSRGER 396
+ D +R + G+ + SP+ P N + S +G R
Sbjct: 699 EMPDILRDDASPGNC-VKTSSPNGKRVSPPHNALSVSPSRKGGR 741
>03_03_0258 -
15905847-15905990,15906088-15906244,15906374-15906504,
15906991-15907126,15907193-15907464,15907874-15908169,
15908279-15908646,15908922-15908987,15909064-15909129,
15909226-15909297,15909391-15909459,15909549-15909620,
15909708-15909776,15909874-15909945,15910046-15910178,
15911223-15911361
Length = 753
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = +1
Query: 241 IANNSASPMITDTIR--SNILFGDSEMNGGSPSHSPSKPMTNGSASSTPSRGERDPTEY* 414
+ NN S I D ++ SN+ + + S +PS P + S S R+P
Sbjct: 233 VQNNQLSGAIPDKLKGISNLQISGNSFSNSPVSPAPSSPPSTTSQSPPRQPSTRNPRNRN 292
Query: 415 GNPITG 432
NP G
Sbjct: 293 RNPPIG 298
>07_03_0965 - 22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +1
Query: 235 GQIANNSASPMITDTIRSNILFGDSEMNGGSPSHSPSKPMTNGSASS 375
G A P + + + S+ G SP + PM+N SASS
Sbjct: 898 GMAPPGPAVPFFNGHVYPSHMLHPSQQQGASPQNLQKNPMSNMSASS 944
>06_01_0783 + 5857950-5857979,5859474-5860424
Length = 326
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 313 MNGGSPSHSPSKPMTNGSASSTPSRGER 396
++GGS + SP PM+ G +P R R
Sbjct: 132 LDGGSVASSPRSPMSRGGGMWSPRRRSR 159
>03_05_0520 +
25139314-25139364,25139580-25139711,25141594-25141731,
25143191-25143241,25143662-25143751,25143854-25144000,
25144108-25144218,25144307-25144375,25144777-25145517,
25145840-25146004,25146376-25146442,25146580-25146704,
25148714-25148983,25149065-25149199,25149316-25149497,
25149669-25149744
Length = 849
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +1
Query: 235 GQIANNSASPMITDTIRSNILFGDSEMNGGSPSHSPSKPMTN 360
G ++ N + +TD + N+L D +N G S P+ N
Sbjct: 413 GPVSGNGSVSALTDLSKRNMLNTDERINSGGISQQLISPLGN 454
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.129 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,861,461
Number of Sequences: 37544
Number of extensions: 292704
Number of successful extensions: 762
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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