Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_O11
         (481 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    24   0.97 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   3.0  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   3.9  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   6.9  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   9.1  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.8 bits (49), Expect = 0.97
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 319 GGSPSHSPSKPMTNGSASSTPSRGERDPT 405
           GGS S SPS P +  S+ S  S G  + T
Sbjct: 86  GGSSSPSPSSPSSFFSSVSPTSLGSENYT 114


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +1

Query: 4    RGTWLLKCPSLSQRPSVSDETALFYAGCRVPN 99
            RG W  +   + +RP +       + GCR  N
Sbjct: 981  RGFWHHRLAEIKRRPDLEYGKVWLFFGCRQRN 1012


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 161 FTGLPSVVSGLKISL 117
           + GLP+V+SGL  SL
Sbjct: 424 YNGLPTVMSGLDESL 438


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 321 WKSFTFSFEADDQRERLV 374
           WK   F F +D++R+  +
Sbjct: 43  WKHIDFDFGSDERRDAAI 60


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 32  DGHFNNHVPR 3
           DG+FN HV R
Sbjct: 76  DGNFNEHVSR 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.312    0.129    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,605
Number of Sequences: 438
Number of extensions: 2523
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)