Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_O10
(536 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 274 5e-75
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 274 5e-75
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 130 2e-31
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 111 8e-26
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 69 3e-13
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 50 3e-07
SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subu... 29 0.44
SPBC146.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.44
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 29 0.58
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 28 0.77
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 27 2.3
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 26 3.1
SPCC622.12c |||NADP-specific glutamate dehydrogenase |Schizosacc... 26 3.1
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.1
SPAC6F12.07 |tom20||mitochondrial TOM complex subunit Tom20|Schi... 25 5.4
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 25 5.4
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 25 5.4
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 25 7.2
SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 25 7.2
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 25 7.2
SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyce... 25 9.5
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 9.5
SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual 25 9.5
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 274 bits (672), Expect = 5e-75
Identities = 131/175 (74%), Positives = 147/175 (84%)
Frame = +1
Query: 10 RIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 189
RI GPN+ PGKK+DL+ K IQRT+LMMG +E IED P+GNI GLVGVDQFLVK+GT+TT
Sbjct: 412 RIQGPNYVPGKKDDLFIKAIQRTVLMMGSRIEPIEDCPAGNIIGLVGVDQFLVKSGTLTT 471
Query: 190 FKNAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVA 369
+ AHNMKVMKFSVSPVV++AVE KN DLPKLVEGLKRL+KSDP V C ESGEHIVA
Sbjct: 472 SEVAHNMKVMKFSVSPVVQVAVEVKNGNDLPKLVEGLKRLSKSDPCVLCTTSESGEHIVA 531
Query: 370 GAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETASEESDQMCLSKSPNKHNRL 534
GAGELHLEICLKDL+EDHA IP+K S PVVSYRE+ SE S LSKSPNKHNR+
Sbjct: 532 GAGELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRI 586
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 274 bits (672), Expect = 5e-75
Identities = 131/175 (74%), Positives = 147/175 (84%)
Frame = +1
Query: 10 RIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 189
RI GPN+ PGKK+DL+ K IQRT+LMMG +E IED P+GNI GLVGVDQFLVK+GT+TT
Sbjct: 412 RIQGPNYVPGKKDDLFIKAIQRTVLMMGSRIEPIEDCPAGNIIGLVGVDQFLVKSGTLTT 471
Query: 190 FKNAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVA 369
+ AHNMKVMKFSVSPVV++AVE KN DLPKLVEGLKRL+KSDP V C ESGEHIVA
Sbjct: 472 SEVAHNMKVMKFSVSPVVQVAVEVKNGNDLPKLVEGLKRLSKSDPCVLCTTSESGEHIVA 531
Query: 370 GAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETASEESDQMCLSKSPNKHNRL 534
GAGELHLEICLKDL+EDHA IP+K S PVVSYRE+ SE S LSKSPNKHNR+
Sbjct: 532 GAGELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRI 586
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 130 bits (313), Expect = 2e-31
Identities = 66/167 (39%), Positives = 100/167 (59%), Gaps = 1/167 (0%)
Frame = +1
Query: 13 IMGPNFQPGKKEDLYEK-TIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 189
+ GP + P E K T++ LMMG+ + +E VP+GN+ + G+ +++T T+ +
Sbjct: 487 VYGPKYDPVNPEKHITKVTVESLYLMMGQELVYLETVPAGNVFAIGGLAGTVLRTATLCS 546
Query: 190 FKNAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVA 369
N N+ + + P+VR+A+EP P ++ KLV GL L ++DP VQ EE+GEH++
Sbjct: 547 SPNGPNLVGVTQQMEPIVRVALEPVRPFEMNKLVTGLDMLNQADPCVQIAVEENGEHVIM 606
Query: 370 GAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETASEESDQMCLSK 510
AGE+HLE CLKDL E A I I+ S P+V YRET D + +K
Sbjct: 607 CAGEIHLERCLKDLRERFAKIEIQASQPLVPYRETTIATPDLLAKNK 653
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 111 bits (266), Expect = 8e-26
Identities = 61/178 (34%), Positives = 99/178 (55%), Gaps = 3/178 (1%)
Frame = +1
Query: 10 RIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 189
+++G N+ +ED+ I + RY ++ +G + L GVD + KT TI +
Sbjct: 521 KVLGENYSLEDEEDMVVAHIAEICVPCARYRLHVDGAVAGMLVLLGGVDNSISKTATIVS 580
Query: 190 FK---NAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEH 360
+ + + + V ++AVEP NP++LPKL++GL++ KS P+ EESGEH
Sbjct: 581 DNLKDDPYIFRPIAHMSESVFKVAVEPHNPSELPKLLDGLRKTNKSYPLSITKVEESGEH 640
Query: 361 IVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETASEESDQMCLSKSPNKHNRL 534
+ G GE++++ L DL ++ I I+ SDPV + ETA + S C S +PNK NR+
Sbjct: 641 TIFGTGEMYMDCLLYDLRTLYSEIEIRVSDPVARFCETAVDTSSIKCFSDTPNKKNRI 698
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 69.3 bits (162), Expect = 3e-13
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Frame = +1
Query: 67 IQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVR 246
+ R + M +E IE V +G IC L G++ T T ++ M M F PV+
Sbjct: 421 VSRLVRMHSNDMEEIEKVEAGGICALFGIE--CASGDTFTDGSVSYTMTSM-FVPEPVIS 477
Query: 247 IAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDH 423
++++PK+ D + L R + DP + ++ ES E I++G GELHLE+ ++ + ++
Sbjct: 478 LSLKPKSK-DTTSFSKALNRFQREDPTFRVQLDNESKETIISGMGELHLEVYVERMRREY 536
Query: 424 ACIPIKKSDPVVSYRETASEE 486
+ + P V++RET S++
Sbjct: 537 K-VDCETGKPRVAFRETLSKK 556
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 49.6 bits (113), Expect = 3e-07
Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 9/185 (4%)
Frame = +1
Query: 1 ARGRIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGT 180
+RG +M F P K+ E+ I R + + ++ + +GNI + G+ QF TG
Sbjct: 365 SRGMMM---FNPRTKKS--ERAI-RLYNVFADQTQEVDCISAGNIGVISGIKQF--HTGD 416
Query: 181 IT----TFKNAHNMKVMKFSV----SPVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQC 336
I KN H SV PV ++EP + D P L+E L + + DP +
Sbjct: 417 IIINKENSKNFHEYLSGNQSVISIPEPVCIASIEPYSLKDEPALLEALANMNREDPSFRY 476
Query: 337 INE-ESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETASEESDQMCLSKS 513
+ E+G+ ++ G G +HL++ + L + V YRET + S +
Sbjct: 477 TQDLENGQLLIQGMGIMHLQVSYERLVSEFGA-RASLGKVQVGYRETLIDVSFNSVTLST 535
Query: 514 PNKHN 528
NK N
Sbjct: 536 ENKEN 540
>SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subunit
Tfg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 241
Score = 29.1 bits (62), Expect = 0.44
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +1
Query: 268 PADLPKLVEGLKRLAKSD--PMVQCINEESGEHIVA----GAGELHLEI 396
P D+ KL EGL++L + D +VQ +NE + GE H+++
Sbjct: 172 PVDMDKLAEGLQKLQEDDLLQVVQMVNENKTPDMYVRNDIEGGEFHIDL 220
>SPBC146.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 263
Score = 29.1 bits (62), Expect = 0.44
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -3
Query: 258 LNGYTHDGRHAKLHNLHVMCVLEGSDGTSLDEELIDADQTANVTGGHILNGLHVTAHHED 79
+NG +LHN+ C ++GSD S D+T + +G N L ++ H D
Sbjct: 1 MNGIRKKPATLQLHNIKTSCFIDGSDDQS--------DRTRSSSGDSTSNSLKLSHHISD 52
Query: 78 GTLDGL 61
++ +
Sbjct: 53 ELINAI 58
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 28.7 bits (61), Expect = 0.58
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = -3
Query: 270 GILGLN-GYTHD--GRHAKLHNLHVMCVLEGSDGTSLDEELIDADQTANVTGGHILNGLH 100
GIL N G+ HD H H+ H MC+ ++ ++ EE + N H
Sbjct: 467 GILAFNHGHNHDHGSHHHHSHSNHSMCLPNTTNDINIFEEFEEEKDNVEAQKMGYTNDDH 526
Query: 99 VTAH 88
V+ H
Sbjct: 527 VSQH 530
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 28.3 bits (60), Expect = 0.77
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 145 VGVDQFLVKTGTITTFKNAHNMKV--MKFSVSPVVRIAV 255
+GVD F K G + +K+ N+K+ +K+ V+P I V
Sbjct: 404 MGVDDFEEKPGVLANWKSVKNLKLLSLKYDVTPPRLITV 442
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 154 DQFLVKTGTITTFKNAHNMKVMKFSVSPVV 243
D FLVK G + ++ +N+ FSVS +V
Sbjct: 82 DTFLVKYGDLINIQDPYNLNKTLFSVSDLV 111
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 123 GHILNGLHVTAHHEDGTLDGLLIQIFFLAGLEVGAHD 13
G+++NG V +HH+ L L+ Q A + VG +D
Sbjct: 573 GNVINGFIVRSHHDQLILKELMRQSNCHATVVVGKYD 609
>SPCC622.12c |||NADP-specific glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 451
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 19 GPNFQP-GKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVG 150
G +F P GK ++ + Q + + RY+ DVP+G+I G+ G
Sbjct: 115 GSDFDPKGKSDNEIRRFSQAFMRQLFRYIGPQTDVPAGDI-GVTG 158
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 4.1
Identities = 25/111 (22%), Positives = 41/111 (36%)
Frame = -1
Query: 491 SDSSLAVSRYDTTGSDFLIGMQAWSSSRSLRQISRCNSPAPATMCSPDSSLMHCTIGSDL 312
S +SL S T S + SSS +L S + ++ SSL H +
Sbjct: 94 SSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSSSGMSSSSLSHSSSVPSS 153
Query: 311 ARRFRPSTSLGRSAGFLGSTAIRTTGDTLNFITFMLCAFLKVVMVPVLTRN 159
+ + S+ S T D + IT + +++ V+ P T N
Sbjct: 154 SSSYHSSSMTTSGLSSSASIVSSTYRDGPSIITLVSTSYVSEVVTPTTTNN 204
>SPAC6F12.07 |tom20||mitochondrial TOM complex subunit
Tom20|Schizosaccharomyces pombe|chr 1|||Manual
Length = 152
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 31 QPGKKEDLYEKTIQRTILMMGRYVEAIEDVPS 126
QP + +YE+T+ I+ + R ++A E +PS
Sbjct: 119 QPVELFAIYERTVPEPIMNLLRAMQAKESIPS 150
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 391 EICLKDLEEDHACIPIKKSDPVVSYRETASEESDQMCLSKSPNK 522
E+C +LE+D I +S +S + +++ DQ+ S + +K
Sbjct: 64 ELCNFELEKDSLESMIHESSTALSAQSNTAQDGDQLASSSTISK 107
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 25.4 bits (53), Expect = 5.4
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = -1
Query: 347 SSLMHCTIGSDLARRFRPSTSLGRSAGFLGSTAIRTTGDTLNFITFMLCAFLKVVMVPVL 168
S +H T+ S L + + P SL FLG TA + + ++ + + A L V
Sbjct: 469 SGALHVTVVSGLPQVYYPEASLTSFGNFLG-TATSYSSASASYPSTSMSASLSSVHTSSA 527
Query: 167 TRN*STPTRPQMLPEGTSSMAST 99
T + S + G+SS +S+
Sbjct: 528 TSS-SKSSSSSSSRSGSSSSSSS 549
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 25.0 bits (52), Expect = 7.2
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +1
Query: 97 YVEAIEDVPSGNIC--GLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRIAVE 258
Y+ A ++ SG G V + L T ++ A + + K + SP+VRI E
Sbjct: 414 YIAAFSEILSGRNYDFGEVSIQLMLSCTTCVSNMMEALPLCMAKIAYSPIVRILCE 469
>SPAC1002.10c |sgt1||SGT1 family transcriptional regulator
Sgt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 25.0 bits (52), Expect = 7.2
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -1
Query: 503 KHIWSDSSLAVSRYDTTGSDFLIGM 429
+HIW + L + R + G D ++G+
Sbjct: 57 EHIWQNEELNLQRVEYQGKDCILGI 81
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 466 RETASEESDQMCLSKSPNKHNRL 534
R T EE + L+KSP+ HNR+
Sbjct: 466 RLTDDEEREIRALAKSPDIHNRI 488
>SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 351
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 325 MVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIK 441
M + IN +S + +E CL L+E H +P++
Sbjct: 1 MKEMINLDSSSEPSIVTKQFSVEECLSKLKEQHCYVPMR 39
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 398 QISRCNSPAPATMCSPDSSLMHCTIGSDLA 309
++SR NSP P + P+ L+H + S ++
Sbjct: 1045 ELSRNNSPRPDFLPLPNQPLLHSNLHSPVS 1074
>SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 533
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 301 KRLAKSDPMVQCINEESGEHIVAGAGEL 384
KR A + +V C+NE E +A A EL
Sbjct: 83 KRAAIAQQLVNCVNELFYEEALARAAEL 110
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.134 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,399,943
Number of Sequences: 5004
Number of extensions: 49562
Number of successful extensions: 205
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 222442660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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