Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_O10
(536 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 228 2e-60
02_04_0017 + 18937774-18937864,18938505-18940945 228 2e-60
01_06_0662 + 30987187-30987277,30987825-30990214 227 4e-60
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 224 4e-59
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 143 9e-35
03_05_0511 + 25056018-25059107 129 2e-30
02_04_0148 - 20198407-20201424 124 6e-29
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 70 1e-12
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 64 9e-11
04_03_0531 + 16817676-16818299 31 0.44
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 30 1.0
02_05_0363 - 28297295-28298167 30 1.0
01_06_0930 + 33134385-33138257 30 1.0
09_02_0302 - 7086017-7086124,7086125-7086796,7087511-7088070,708... 29 1.8
06_01_0244 - 1844161-1844241,1844356-1844394,1844510-1844617,184... 29 2.3
08_02_1219 + 25363122-25363250,25363310-25363495,25363772-25363795 29 3.1
08_01_0515 - 4490855-4490902,4490992-4491072,4491752-4491823,449... 29 3.1
05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,341... 29 3.1
01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001 29 3.1
04_03_0424 + 15786147-15786213,15786751-15787037 28 4.1
01_07_0303 + 42615578-42615709,42616273-42616312,42616393-426164... 28 4.1
06_02_0251 - 13478902-13478952,13478989-13479055,13479168-134793... 27 7.2
05_03_0498 - 14720989-14722119,14722225-14722839 27 7.2
03_05_0060 + 20363857-20365359 27 7.2
02_02_0340 + 9135846-9138377 27 7.2
02_01_0656 - 4870315-4870975,4872018-4872245,4872874-4872987,487... 27 7.2
01_06_1781 + 39832977-39833284,39835083-39835261,39836085-398361... 27 7.2
08_01_0314 + 2777971-2778607,2778809-2778885,2778964-2779011 27 9.5
07_03_1000 - 23220878-23221821,23222164-23223001 27 9.5
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 27 9.5
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 27 9.5
03_01_0244 - 1900492-1901109,1901416-1902345 27 9.5
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 228 bits (558), Expect = 2e-60
Identities = 113/178 (63%), Positives = 138/178 (77%), Gaps = 3/178 (1%)
Frame = +1
Query: 10 RIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 189
RIMGPN+ PG+K+DLY K++QRT++ MG+ E++EDVP GN +VG+DQF+ K T+T
Sbjct: 410 RIMGPNYVPGQKKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNATLTN 469
Query: 190 FKNAHN--MKVMKFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHI 363
K A ++ MKFSVSPVVR+AV+ K +DLPKLVEGLKRLAKSDPMV C EESGEHI
Sbjct: 470 EKEADACPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHI 529
Query: 364 VAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETASEESDQMCLSKSPNKHNRL 534
+AGAGELHLEICLKDL+ED I S PVVS+RET E+S + +SKSPNKHNRL
Sbjct: 530 IAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRL 587
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 228 bits (557), Expect = 2e-60
Identities = 113/178 (63%), Positives = 139/178 (78%), Gaps = 3/178 (1%)
Frame = +1
Query: 10 RIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 189
RIMGPN+ PG+K+DLY K++QRT++ MG+ E++EDVP GN +VG+DQF+ K T+T
Sbjct: 410 RIMGPNYVPGQKKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNATLTN 469
Query: 190 FK--NAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHI 363
K +A ++ MKFSVSPVVR+AV+ K +DLPKLVEGLKRLAKSDPMV C EESGEHI
Sbjct: 470 EKESDACPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHI 529
Query: 364 VAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETASEESDQMCLSKSPNKHNRL 534
+AGAGELHLEICLKDL+ED I S PVVS+RET E+S + +SKSPNKHNRL
Sbjct: 530 IAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRL 587
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 227 bits (555), Expect = 4e-60
Identities = 113/178 (63%), Positives = 137/178 (76%), Gaps = 3/178 (1%)
Frame = +1
Query: 10 RIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 189
RIMGPN+ PG+K+DLY K +QRT++ MG+ E++E VP GN +VG+DQF+ K T+T
Sbjct: 406 RIMGPNYAPGQKKDLYVKNVQRTVIWMGKKQESVEGVPCGNTVAMVGLDQFITKNATLTN 465
Query: 190 FK--NAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHI 363
K +A +K MKFSVSPVVR+AV+ K +DLPKLVEGLKRLAKSDPMV C EESGEHI
Sbjct: 466 EKEVDACPIKAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTVEESGEHI 525
Query: 364 VAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETASEESDQMCLSKSPNKHNRL 534
+AGAGELHLEICLKDL+ED I S PVVS+RET E+S + +SKSPNKHNRL
Sbjct: 526 IAGAGELHLEICLKDLQEDFMGGAEITVSPPVVSFRETVLEKSCRTVMSKSPNKHNRL 583
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 224 bits (547), Expect = 4e-59
Identities = 106/178 (59%), Positives = 137/178 (76%), Gaps = 3/178 (1%)
Frame = +1
Query: 10 RIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 189
RIMGPNF PG+K+DLY KT+QRT++ MG+ E+++DVP GN +VG+DQF+ K T+T
Sbjct: 412 RIMGPNFVPGEKKDLYVKTVQRTVIWMGKKQESVDDVPCGNTVAMVGLDQFITKNATLTD 471
Query: 190 FK--NAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHI 363
K +AH +K MKFSVSPVVR +V KN ++LPKLVEGLKRLAKSDP+V C EESGEH+
Sbjct: 472 EKAVDAHPIKAMKFSVSPVVRKSVACKNASELPKLVEGLKRLAKSDPLVVCTIEESGEHV 531
Query: 364 VAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETASEESDQMCLSKSPNKHNRL 534
+AG G+LHLEIC+KDL+ED I P+++YRET ++ S + +SKSPNKHNRL
Sbjct: 532 IAGVGQLHLEICIKDLQEDFMGGAEIIVGPPIITYRETVTKNSCRTVMSKSPNKHNRL 589
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 143 bits (346), Expect = 9e-35
Identities = 67/178 (37%), Positives = 112/178 (62%), Gaps = 3/178 (1%)
Frame = +1
Query: 10 RIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 189
R++G + P +ED+ K + + + RY I P+G+ + GVD ++KT TI
Sbjct: 532 RVLGEGYSPDDEEDMTVKEVTKLWVYQARYRVPISKAPAGSWVLIEGVDASIMKTATICP 591
Query: 190 FK---NAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEH 360
K + + + ++F+ PVV+IA EP NP++LPK+VEGL++++KS P+ EESGEH
Sbjct: 592 MKMDEDVYIFRPLRFNTLPVVKIAAEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEH 651
Query: 361 IVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETASEESDQMCLSKSPNKHNRL 534
+ G GEL+L+ +KDL E ++ + +K +DPVV++ ET + S C +++PNK N++
Sbjct: 652 TILGTGELYLDSIMKDLRELYSEVEVKVADPVVTFCETVVDTSSMKCFAETPNKRNKI 709
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 129 bits (311), Expect = 2e-30
Identities = 63/162 (38%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Frame = +1
Query: 13 IMGPNFQPGKKEDLY----EKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGT 180
++ P + P K E + E +Q M+G+ + + V +GN+ + G+ ++K+ T
Sbjct: 458 VLSPLYDPMKGEAMQKHVQEVELQYLYEMLGQGLRPVSSVCAGNVVAIQGLGHHILKSAT 517
Query: 181 ITTFKNAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEH 360
+++ KN M F VSP++++A+EP NPADL LV+GLK L ++DP V+ + GEH
Sbjct: 518 LSSTKNCWPFSSMMFQVSPMLKVAIEPSNPADLGALVKGLKLLNRADPFVEYTVSQRGEH 577
Query: 361 IVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETASEE 486
++A AGE+HLE C KDLEE A + + SDP+VS++ET E
Sbjct: 578 VLAAAGEIHLERCKKDLEERFAKVKLVVSDPLVSFKETIEGE 619
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 124 bits (298), Expect = 6e-29
Identities = 56/149 (37%), Positives = 96/149 (64%)
Frame = +1
Query: 40 KKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVM 219
+++ L E +Q MMG +E + V +G++ + G+ ++K T+++ KN M
Sbjct: 451 QQKHLQEVELQHLYQMMGPDLEIVSAVRAGDVLAIEGLGHHVLKNATLSSTKNCQPFSGM 510
Query: 220 KFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEIC 399
F VSP++++A+EP NP+DL LV+GLK L ++DP ++ E GEH++A AGE+HLE C
Sbjct: 511 MFQVSPMLKVAIEPSNPSDLGALVKGLKLLNQADPFIEYTVSERGEHVLAAAGEIHLEHC 570
Query: 400 LKDLEEDHACIPIKKSDPVVSYRETASEE 486
+K+L+E A + ++ S P+VS+++T E
Sbjct: 571 IKNLQERFARVQLEVSKPLVSFKDTIQGE 599
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 69.7 bits (163), Expect = 1e-12
Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 2/170 (1%)
Frame = +1
Query: 7 GRIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTG-TI 183
G+++ ++ +D E+ I R + M E I +G+I L G+ + TG T+
Sbjct: 384 GKLVAGSYVLNANKDKKER-IGRLLEMHANSKEDITVAVAGDIVALAGLKDTI--TGETL 440
Query: 184 TTFKNAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQ-CINEESGEH 360
+ ++ M+F PV+++A+EPK AD K+ GL +LA+ DP +EE+ +
Sbjct: 441 SDPDKPVVLERMEFP-DPVIKVAIEPKTKADADKMATGLIKLAQEDPSFHFSRDEETNQT 499
Query: 361 IVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETASEESDQMCLSK 510
++ G GELHL+I + L+ + + P V+YRE+ S+ S+ + K
Sbjct: 500 VIEGMGELHLDIIVDRLKREFR-VEANVGAPQVNYRESISKISEVQYVHK 548
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 63.7 bits (148), Expect = 9e-11
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Frame = +1
Query: 67 IQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVR 246
+ R + M +E I++ +G I + GVD T T + M M PV+
Sbjct: 424 VPRLVRMHSNEMEDIQEAHAGQIVAVFGVD--CASGDTFTDGSVKYTMTSMNVP-EPVMS 480
Query: 247 IAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDH 423
+AV P + + + L R K DP + ++ ESGE I++G GELHL+I ++ + ++
Sbjct: 481 LAVSPISKDSGGQFSKALNRFQKEDPTFRVGLDPESGETIISGMGELHLDIYVERIRREY 540
Query: 424 ACIPIKKSDPVVSYRETASEESD 492
+ K P V++RET ++ ++
Sbjct: 541 K-VDAKVGKPRVNFRETITQRAE 562
>04_03_0531 + 16817676-16818299
Length = 207
Score = 31.5 bits (68), Expect = 0.44
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 524 CLLGDLDKHIWSDSSLAVSRYDTTGSDFLIG-MQAWSSSRSLRQIS-RCNSPAPATMC 357
C GD D + SS AVS F +Q WSS+ ++R S C PAPAT C
Sbjct: 145 CGGGDDDLDDTASSSSAVSSSLQPSCAFSARHLQQWSSTAAVRGTSIYCRPPAPATQC 202
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = -1
Query: 386 CNSPAPATMCSPDSSLMHCTIGSDLARRFRPSTSLGRSAGFLGSTAIRTT 237
C P+P+ D S C GS + P+T+ AG S +T
Sbjct: 339 CFLPSPSEAIGTDGSSTSCGTGSSVTNAIAPATTTSTFAGLFASVTTSST 388
>02_05_0363 - 28297295-28298167
Length = 290
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 17 WAPTSSPARKKICMRRPSSVPSS*WAVTWRPL 112
W P+ SP R+ C RR +S S +AV PL
Sbjct: 206 WQPSPSPMRRTPCRRRQTSTMPSGFAVCLSPL 237
>01_06_0930 + 33134385-33138257
Length = 1290
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +1
Query: 34 PGKKEDL----YEKTIQRTILMMGRYVEAIEDVPSGNIC--GLVGVDQFLVKTGTITTFK 195
P + EDL Y+ T+ + L+ G Y E +E N C G + + + + T +
Sbjct: 777 PSQLEDLTIEGYKSTMYPSWLLDGSYFENLESFTLANCCVIGSLPPNTEIFRHCMTLTLE 836
Query: 196 NAHNMKVMKFSVSPVVRIAVE 258
N NMK + F + +++E
Sbjct: 837 NVPNMKTLPFLPEGLTSLSIE 857
>09_02_0302 -
7086017-7086124,7086125-7086796,7087511-7088070,
7088754-7089131,7089357-7089821,7090022-7090127,
7090219-7090294,7090407-7090648,7090824-7090904,
7091013-7091205,7091336-7091558,7091611-7091646,
7091694-7091790
Length = 1078
Score = 29.5 bits (63), Expect = 1.8
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Frame = +1
Query: 112 EDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKV--MKFSVSPVVRIAVEPKNPADLPK 285
E +PS +C + +TT + + M+V + +VSP +I V+P P
Sbjct: 27 EQLPSQGVCVTLSCLTVGKSEVPLTTRFDGNAMQVDGLLKNVSPTTKIVVKPNEELKSPF 86
Query: 286 LVEGLKRLAKSDPMV--------QCINEESGEHIVAGAGELHLEICLKDLEE 417
LV+ L + DP++ + +E V +G L + + L D++E
Sbjct: 87 LVKRHLFLKRPDPIILDELYSLTTKVTDEESRQSVWVSGNLPINLKLVDIQE 138
>06_01_0244 -
1844161-1844241,1844356-1844394,1844510-1844617,
1844638-1844685,1845058-1845111,1845214-1845268,
1845442-1845522,1846238-1846615,1847196-1847401
Length = 349
Score = 29.1 bits (62), Expect = 2.3
Identities = 27/87 (31%), Positives = 32/87 (36%)
Frame = +1
Query: 256 EPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIP 435
+P +PA LP EGL R A Q + E V GEL I LK+ I
Sbjct: 59 KPCDPAPLPTQCEGLLRGASEPESAQALQEPD----VLSVGELLGAIALKE-----PIIS 109
Query: 436 IKKSDPVVSYRETASEESDQMCLSKSP 516
S P + CLS SP
Sbjct: 110 SPSSSPQAVPEDNIDAVPSGCCLSSSP 136
>08_02_1219 + 25363122-25363250,25363310-25363495,25363772-25363795
Length = 112
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2
Query: 304 ASDLPPAWAGRRDSWAQRLY 245
ASD P A RRD++AQRLY
Sbjct: 23 ASDHPAALRSRRDAFAQRLY 42
>08_01_0515 -
4490855-4490902,4490992-4491072,4491752-4491823,
4492296-4492373,4493316-4493444,4493862-4493942,
4494064-4494205,4494672-4494865,4494962-4495027,
4495108-4495194,4495326-4495376
Length = 342
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -1
Query: 464 YDTTGSDFLIGMQAWSSSRSLRQISRCNSPAPATMCSPDSSLMHCTIGSDLAR 306
+ T GSD S + L+ SRC P P + + D S+ + D +R
Sbjct: 255 FATAGSDGAFNFWDKDSKQRLKAFSRCPLPIPCSTFNSDGSIFAYAVCYDWSR 307
>05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,
3413770-3413881,3414309-3414489,3414714-3414896,
3415133-3415315,3416062-3416131,3416413-3416522,
3416604-3416908,3417079-3417175,3417622-3417765,
3418217-3418303,3418387-3418473,3418566-3418706,
3418805-3418930,3419166-3419264,3419690-3419757,
3420275-3420341,3420713-3420883,3420959-3421048,
3421831-3421911,3423397-3423470,3423784-3423855,
3423925-3424017,3424138-3424204
Length = 1030
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/94 (23%), Positives = 39/94 (41%)
Frame = -3
Query: 366 DNVFARLFVDALHHRV*FGETLQTFHQLGQVGGILGLNGYTHDGRHAKLHNLHVMCVLEG 187
D FA F+ L H+ F L + +L L Y D +L+ ++
Sbjct: 779 DLPFATFFLSKLKHKYNFLNDLPSLDP-ELYRHLLSLKHYDGDISQLELY----FVIVNN 833
Query: 186 SDGTSLDEELIDADQTANVTGGHILNGLHVTAHH 85
G +EEL+ + VT +++ +H+ A+H
Sbjct: 834 EYGEQSEEELLPGGRDMRVTSENVITYIHLVANH 867
>01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001
Length = 1472
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +1
Query: 34 PGKKEDL----YEKTIQRTILMMGRYVEAIEDVPSGNICGLVGV--DQFLVKTGTITTFK 195
P + EDL Y+ + + L+ G Y E +E N CG+ + + + + T +
Sbjct: 959 PSQLEDLTIEGYKSAMYPSWLLDGSYFENLESFTLANCCGIGSLPPNTEIFRHCLTLTLE 1018
Query: 196 NAHNMKVMKF 225
N NMK + F
Sbjct: 1019 NVPNMKTLSF 1028
>04_03_0424 + 15786147-15786213,15786751-15787037
Length = 117
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -1
Query: 536 KRRLCLLGDLDKHIWSDSSLAVSRYDTT--GSDFLIGMQAWSSSRSLR 399
K +C + D IW++ S S D+T GS +I +S RSLR
Sbjct: 13 KYEICSIFDKCSSIWNEDSAVESGSDSTCRGSSSIISTSETASLRSLR 60
>01_07_0303 +
42615578-42615709,42616273-42616312,42616393-42616477,
42616634-42616813,42618274-42618354,42618890-42619011,
42619867-42620723,42621656-42621897,42622107-42622200,
42622306-42622476,42622695-42622740,42624101-42624111,
42624141-42624392
Length = 770
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/84 (25%), Positives = 33/84 (39%)
Frame = +1
Query: 124 SGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLK 303
+G+ L G ++ TG T + N+ + K P +R +PKN + + GL
Sbjct: 271 TGSATILTGDQPVIIYTGADTEKRQVQNIVLPKNRSDPYLREWTKPKNNPLIEPVGPGLN 330
Query: 304 RLAKSDPMVQCINEESGEHIVAGA 375
DP I + I GA
Sbjct: 331 SNQFRDPTTGWIGPDGLWRIAVGA 354
>06_02_0251 -
13478902-13478952,13478989-13479055,13479168-13479379,
13480144-13481540,13481574-13482432,13482537-13482836
Length = 961
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 274 DLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICL-KDLEEDHACIPIKKSD 450
DLP+ E + + AK+ NEE E I+ +LH E+C KD + H + +
Sbjct: 684 DLPE--ESIHQSAKNSTENTSYNEEPEESIIKRKIKLHQEMCNDKDAQTKHKVEGVSEIG 741
Query: 451 P 453
P
Sbjct: 742 P 742
>05_03_0498 - 14720989-14722119,14722225-14722839
Length = 581
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 168 DEELIDADQTANVTGGHILNGLHVTAHHEDGTLDG 64
D L+DAD T N G ++N GT+DG
Sbjct: 504 DASLVDADGTVNEAGQRLVNLRREWTSDARGTIDG 538
>03_05_0060 + 20363857-20365359
Length = 500
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 141 TANVTGGHILNGLHVTAHHEDGTLDGLL 58
+AN TG ++G+H HH G ++G L
Sbjct: 240 SANQTGNSFVDGIHGENHHSIGEVNGNL 267
>02_02_0340 + 9135846-9138377
Length = 843
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 458 TTGSDFLIGMQAWSSSRSLRQISRCNSPAPATMCS 354
TTGSD L G+Q + R+L I+ P +CS
Sbjct: 801 TTGSDVLDGLQPHYNLRALGIINHGGPTGPGWLCS 835
>02_01_0656 -
4870315-4870975,4872018-4872245,4872874-4872987,
4873813-4873901
Length = 363
Score = 27.5 bits (58), Expect = 7.2
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 10/76 (13%)
Frame = -3
Query: 282 GQVGGILGLNGYTHDG-RHAKLHNLHVMCVL-------EGSDGTSLDEELIDADQTANVT 127
G GG+LGL G H G + AK HV + E D D L+ +D A
Sbjct: 181 GLRGGVLGLGGVGHMGVKVAKSMGHHVTVISSSARKRGEAMDDLGADAYLVSSDAAAMAA 240
Query: 126 GGHILNGL--HVTAHH 85
G L+ + V HH
Sbjct: 241 AGDSLDYIIDTVPVHH 256
>01_06_1781 +
39832977-39833284,39835083-39835261,39836085-39836170,
39836205-39836293,39837477-39837579,39837940-39837968,
39838668-39838830,39838901-39838954,39839443-39839621,
39839869-39840001
Length = 440
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Frame = -1
Query: 533 RRLCLLGDLDKHIWSDSSLAVSRYD----TTGSDFLIGMQAWSSSRSLRQISRCNSPAPA 366
R C +G +K + AV+ D D L ++ + R+ + S+C P +
Sbjct: 40 RSYCTVGSAEKAPTKECCKAVANADFQCLCDRRDMLRNLENIDADRATQIPSKCGVPGAS 99
Query: 365 TMCSPDSSLMHCTIGSDL 312
+ C SL C I +L
Sbjct: 100 SSCKLRGSLERCAITRNL 117
>08_01_0314 + 2777971-2778607,2778809-2778885,2778964-2779011
Length = 253
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +1
Query: 391 EICLKDLEEDHACIPIKKSDPVVSYRETASEESD 492
E+CL+D++ +P P++ + E+SD
Sbjct: 174 ELCLQDVDVGGVFVPCSSDHPIIHLADLPPEQSD 207
>07_03_1000 - 23220878-23221821,23222164-23223001
Length = 593
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 322 GLIWRDASDLPPA-WAGRRDSWAQRLYARRATR*T 221
G +W AS + A W+G RD+ ++ YA R T
Sbjct: 527 GRVWPRASAMAEALWSGNRDATGRKRYAEATDRLT 561
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 27.1 bits (57), Expect = 9.5
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 1/157 (0%)
Frame = +1
Query: 31 QPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNM 210
+ GK L E+ + R M+ + + +E++ + I L + LVK +T +N N+
Sbjct: 84 EQGKTAALEEQALTRESAMLNQEAKQLEEL-TRRIEELELEKEKLVKG--VTEAENKQNL 140
Query: 211 KVMKFSVSPVVRIAVEPKNPADLPKLVEGL-KRLAKSDPMVQCINEESGEHIVAGAGELH 387
+ +A + K AD + ++ L L S +Q I E + A A +LH
Sbjct: 141 HYTSLQEAQR-SLADKDKELADATQSLKELGSELESSKERIQEIEAE----LAASADKLH 195
Query: 388 LEICLKDLEEDHACIPIKKSDPVVSYRETASEESDQM 498
LKD HA K++ + ETA +M
Sbjct: 196 KLEELKDERSLHAAQEAKRASELDKTLETAQLNMKEM 232
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 222 LHNLHVMCVLEGSDGTSLDEELIDAD-QTANVTGGHILNGL 103
LHN + + G+ TSLD +L++ VTGG ++G+
Sbjct: 567 LHNGNTVFTWTGNLTTSLDNDLVERQLDVIKVTGGTTISGV 607
>03_01_0244 - 1900492-1901109,1901416-1902345
Length = 515
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Frame = -1
Query: 434 GMQAWSSSRSLR-QISRCNSPAPATM-----CSPDSSLMHCTIGSDLARR 303
G AW R R Q RC+ P P + S L HC++ ++ ARR
Sbjct: 28 GGPAWGKYRRARGQSPRCSIPGPKGLPVVGSLGLMSGLAHCSLAAEAARR 77
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.134 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,146,747
Number of Sequences: 37544
Number of extensions: 388593
Number of successful extensions: 1365
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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