Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_O09
(585 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0203 + 12986685-12988691 33 0.17
03_02_0985 - 12961787-12961984,12963177-12963337,12965332-129654... 31 0.68
01_06_0148 - 27007330-27008124 31 0.68
07_03_1577 - 27869596-27869682,27869769-27869869,27869956-278699... 30 1.6
03_05_0070 - 20478396-20478505,20478605-20478780,20481162-204812... 29 2.7
02_03_0171 + 15945591-15945681,15947068-15947138,15947715-159478... 29 2.7
10_08_0435 + 17905728-17905901,17906608-17906931,17907205-179073... 29 3.6
03_06_0078 + 31505126-31507933 29 3.6
06_03_0355 + 19822110-19824491 28 4.8
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083... 28 4.8
10_06_0094 - 10604597-10605028,10605673-10605738,10606249-10606371 28 6.3
06_01_1159 - 9852316-9852441,9852743-9852838,9852912-9852977,985... 28 6.3
02_05_0280 + 27435166-27435254,27436348-27436437,27436764-274368... 28 6.3
07_03_0735 + 21075033-21075846,21077065-21077199,21077384-210775... 27 8.3
03_02_0755 + 10932897-10933010,10933446-10933577,10933666-109337... 27 8.3
>06_02_0203 + 12986685-12988691
Length = 668
Score = 33.1 bits (72), Expect = 0.17
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = +3
Query: 165 SCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKDVVAA 344
S L ++ T + V+ + + + T K D E T+L + + P+P+ + +AA
Sbjct: 459 SLLLEISTRAEGVVAAVDALGTTAKFKKA-DHAEPPATTTL---DAEAAMPVPNSNAIAA 514
Query: 345 EKAHQNLLEGVEHFDKTQMKHTTTEEKNSL 434
++AH N G EH K + TTT +++
Sbjct: 515 DEAHGNATAG-EHDKKETAEQTTTTSASTV 543
>03_02_0985 - 12961787-12961984,12963177-12963337,12965332-12965489,
12966015-12966105,12966715-12966752,12966994-12967154,
12967249-12968687,12968815-12969227,12969630-12970987,
12971089-12971454,12971533-12971696,12971748-12971820,
12972967-12973113
Length = 1588
Score = 31.1 bits (67), Expect = 0.68
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +3
Query: 183 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQ-EKNPLPDKDVVAAEKAHQ 359
D EK + +DVA + K GIE D + K T + E N L D + ++
Sbjct: 927 DILEKTKRINDDDVAFHEKMKEHRAGIETLDLSGKKKTVKEWEDNRLSSMDHTSKGGDNE 986
Query: 360 NLLEGVEHFDKTQMKHTTTEEKNSL 434
NL E + K++ + ++ N+L
Sbjct: 987 NLNERLSKIKKSEARPEEVQDANAL 1011
>01_06_0148 - 27007330-27008124
Length = 264
Score = 31.1 bits (67), Expect = 0.68
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 302 PGEEPSA*QRCCRSGKGTSELTGRRRALRQNANEAHDDGREEFFTAN 442
P P++ +RC +SG S L RR + R +H DG+E+F N
Sbjct: 143 PSTTPASPRRCRKSGSTGSVLRWRRISERL-VRRSHSDGKEKFVFLN 188
>07_03_1577 -
27869596-27869682,27869769-27869869,27869956-27869995,
27870879-27870953
Length = 100
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 132 DLKSQLEGFNTSCLRDVDTNEKIVL 206
DL+S+L+ NT CL + + N+K+++
Sbjct: 54 DLQSKLDAVNTECLAEKEKNKKLII 78
>03_05_0070 -
20478396-20478505,20478605-20478780,20481162-20481265,
20481346-20481504,20481718-20481857,20482222-20482311,
20482902-20482970,20484295-20484516,20486175-20486293,
20486377-20486492,20488058-20488146,20488790-20488883
Length = 495
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 108 KDLPKVANDLKSQLEGFNTSCLRDVDTNEKI 200
K+L + +DLKS+LEG+NT D++ + +
Sbjct: 266 KELDERRHDLKSELEGYNTGDSDDINKKKAL 296
>02_03_0171 +
15945591-15945681,15947068-15947138,15947715-15947817,
15948189-15948328,15948535-15948693,15948775-15948878,
15950373-15950548,15952643-15952832,15953704-15953803,
15954171-15954339,15954908-15954990,15955073-15955149,
15955386-15955557
Length = 544
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 108 KDLPKVANDLKSQLEGFNTSCLRDVDTNEKI 200
K+L + +DLKS+LEG+NT D++ + +
Sbjct: 88 KELDERMHDLKSELEGYNTGDSDDINKKKAL 118
>10_08_0435 +
17905728-17905901,17906608-17906931,17907205-17907321,
17908418-17908597,17909064-17909190,17909327-17909440,
17909794-17909909
Length = 383
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 204 LPSAEDV--ATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGV 377
L SAED+ A + F + K+D T + T+ E NP K ++ +AH+ L
Sbjct: 244 LESAEDIRSACHSNRAVCFLKLGKYDETIKECTKALELNPSYLKALLRRGEAHEKL---- 299
Query: 378 EHFDK 392
EH+D+
Sbjct: 300 EHYDE 304
>03_06_0078 + 31505126-31507933
Length = 935
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 246 SLFDGIEKFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGVEH 383
S F G + TS K ++P+PD VV+ + A +++ + +EH
Sbjct: 536 SWFSGRKNVKKTSPKVLSKLRRSPIPDNHVVSFDAAVRSVSQELEH 581
>06_03_0355 + 19822110-19824491
Length = 793
Score = 28.3 bits (60), Expect = 4.8
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 171 LRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTET---QEKNPLPDKDVVA 341
+ +V +++LP+ E+VATE + +E DA SL T +E +P+ D
Sbjct: 203 VEEVSVTHEVMLPNYEEVATEGDGDTAMAAVEN-DAGSLAETVVMTHEEFVAVPEDDEEE 261
Query: 342 AEKAHQNLLEGV 377
A+ +N G+
Sbjct: 262 ADGDEENDATGL 273
>05_07_0354 -
29507068-29507170,29507406-29507431,29508264-29508301,
29508722-29508825,29509005-29509024,29509251-29509299,
29510319-29510406,29510463-29510562,29510660-29510737,
29512688-29512804,29513718-29513821,29514497-29514569,
29514904-29514981,29515091-29515215,29515278-29515341,
29515439-29515597,29515950-29516048,29516496-29516624,
29517010-29517075,29517160-29517304,29517379-29517500,
29517683-29517838,29517918-29518029,29518891-29519036,
29519148-29519252,29519391-29519540,29519703-29519776,
29519902-29520055,29520142-29520408
Length = 1016
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +3
Query: 267 KFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGVEHFDKTQMKHTTTEEK 425
K+D ++ E QEK K + K ++ VE K +M HT+ ++
Sbjct: 262 KYDMKKKEYKEAQEKEKTEKKKMEEVAKIWEDSKGPVEELKKKKMSHTSNTKR 314
>10_06_0094 - 10604597-10605028,10605673-10605738,10606249-10606371
Length = 206
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 464 REK*VPERHRKLRPDKAEAH 523
R + VP+R R+LRPD AEAH
Sbjct: 73 RHRRVPQR-RRLRPDAAEAH 91
>06_01_1159 -
9852316-9852441,9852743-9852838,9852912-9852977,
9853091-9853180,9853262-9853373,9853515-9853598,
9853864-9853940,9854823-9854873,9854924-9855031,
9855703-9855774,9856952-9857011,9857808-9857876,
9858005-9858088,9858212-9858295,9859106-9859198,
9859930-9860030,9861155-9861264,9863058-9863104,
9863693-9863778,9863940-9864012,9864454-9864540,
9864650-9865301,9866164-9867182,9867702-9867797
Length = 1180
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +2
Query: 338 RSGKGTSELTGRRRALRQNANEAHDDGREEFFTAN*SYRSRKREK*VPERHRKLRPDKAE 517
+SG GT + T RR++ EA +D +EE + +S K + RK+ ++ E
Sbjct: 173 KSGTGTKKTTTRRKSPTSRKKEASEDMKEEKASTKKQRKSVKTST-AATKSRKIGVNQEE 231
Query: 518 AH*NLRK 538
+ ++ K
Sbjct: 232 SKSDISK 238
>02_05_0280 +
27435166-27435254,27436348-27436437,27436764-27436866,
27437318-27437377,27437745-27439148,27439227-27439328,
27439424-27439609,27439695-27439820,27439905-27440000,
27440509-27440574
Length = 773
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -3
Query: 262 IPSNRDFWVFSVATSSADGRTIFSFVSTSRKQLVLNPSS*LLRSLATFGKSFREGAS 92
+P ++ F + S+ SSADG T ++K L + S LRSLA+F + + +S
Sbjct: 149 LPYHQQFQLSSL--SSADGLTNIKTDPENKKLLENSASVESLRSLASFSSKYSQSSS 203
>07_03_0735 +
21075033-21075846,21077065-21077199,21077384-21077517,
21077604-21077814,21078033-21078270,21078346-21078496,
21078593-21078931
Length = 673
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 195 KIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKN 314
K VLPS E++A ++ S GIE+ + + Q+KN
Sbjct: 361 KGVLPSGEEIAVKRLSMSSGQGIEELKNELVLVAKLQQKN 400
>03_02_0755 +
10932897-10933010,10933446-10933577,10933666-10933750,
10934668-10934831,10934911-10935357
Length = 313
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Frame = +3
Query: 153 GFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKD 332
G NT+ N + P +E + + +G+ +L P P
Sbjct: 208 GVNTAGSNSDSVNNDLPRPDSESEIVQHIVEGRTEGVSNHSRANLSRENIPRVAPTPQNP 267
Query: 333 VVAAEK-AHQNLL 368
VVA +K H LL
Sbjct: 268 VVAIQKPKHDRLL 280
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,189,586
Number of Sequences: 37544
Number of extensions: 322303
Number of successful extensions: 948
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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