Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_O08
(506 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 116 1e-26
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 116 1e-26
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 93 1e-19
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 93 1e-19
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 93 1e-19
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 93 1e-19
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 93 1e-19
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 61 4e-10
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 57 6e-09
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 40 0.001
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 31 0.36
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 29 1.5
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 29 1.5
Z81531-7|CAB04320.1| 722|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z46933-1|CAA87034.1| 142|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81567-5|CAB04588.2| 154|Caenorhabditis elegans Hypothetical pr... 28 3.4
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 28 3.4
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z83239-6|CAB05803.1| 324|Caenorhabditis elegans Hypothetical pr... 27 5.9
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 5.9
AC024840-2|AAX55682.1| 434|Caenorhabditis elegans Hypothetical ... 27 7.8
AC024840-1|AAF59619.2| 427|Caenorhabditis elegans Hypothetical ... 27 7.8
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 116 bits (279), Expect = 1e-26
Identities = 57/121 (47%), Positives = 73/121 (60%)
Frame = +2
Query: 101 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXXXXXXXXXNYSTP 280
KI+ EGIP ++QRL +AG+QLED SD I E+T+++ Y+TP
Sbjct: 27 KIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGGAKKRKKKVYTTP 82
Query: 281 XXXXXXXXXXXLAVLRYYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTM 460
LAVL+YYK+DENGKI RLR+EC CG GVFMA +RHYCG+CH T+
Sbjct: 83 KKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTL 142
Query: 461 V 463
V
Sbjct: 143 V 143
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 116 bits (279), Expect = 1e-26
Identities = 57/121 (47%), Positives = 73/121 (60%)
Frame = +2
Query: 101 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXXXXXXXXXNYSTP 280
KI+ EGIP ++QRL +AG+QLED SD I E+T+++ Y+TP
Sbjct: 27 KIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGGAKKRKKKVYTTP 82
Query: 281 XXXXXXXXXXXLAVLRYYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTM 460
LAVL+YYK+DENGKI RLR+EC CG GVFMA +RHYCG+CH T+
Sbjct: 83 KKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTL 142
Query: 461 V 463
V
Sbjct: 143 V 143
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 407 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAG 157
+AKIQDKEGIPPDQQRLIFAG
Sbjct: 483 KAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 407 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 483 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 559 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 635 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 711 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 787 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 830
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 407 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 483 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 559 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 635 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 711 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 91.5 bits (217), Expect = 3e-19
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK+STLHLV
Sbjct: 787 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLV 830
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 95 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 61.3 bits (142), Expect = 4e-10
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +2
Query: 101 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
K+++KEGIPP QQRLIFAGKQ+ D +T +DY + S LHLV
Sbjct: 29 KVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLV 70
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 57.2 bits (132), Expect = 6e-09
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = +2
Query: 101 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226
K+Q+K G+PPDQQRLIF QLE+ R L YNI+ E +HLV
Sbjct: 189 KVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLV 230
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 167 EDGRTLSDYNIQKESTLHL 223
+D RT+SDYNI+ STL L
Sbjct: 135 KDQRTISDYNIKNGSTLRL 153
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +2
Query: 104 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 217
I+ + IP L F+GK+LED ++ DYNIQK ST+
Sbjct: 182 IEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTI 219
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 140 RLIFAGKQLEDGRTLSDYNIQKESTLHL 223
R++ K LED TL+ YNIQ+ STL L
Sbjct: 214 RMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +2
Query: 101 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 223
+IQD+ G+P +Q+L+ G ++D + + YN+ + ++L
Sbjct: 605 QIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYL 645
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +2
Query: 101 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 223
+IQD+ G+P +Q+L+ G ++D + + YN+ + ++L
Sbjct: 605 QIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYL 645
>Z81531-7|CAB04320.1| 722|Caenorhabditis elegans Hypothetical
protein F36D3.8 protein.
Length = 722
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 8 RSGGCMVWVGSR*ICKPSETYLSNLEYQSE 97
+S C W+ CKPS ++ NL Y+ E
Sbjct: 672 QSQDCFRWIAPFLKCKPSRVHIDNLSYKYE 701
>Z46933-1|CAA87034.1| 142|Caenorhabditis elegans Hypothetical
protein F34H10.1 protein.
Length = 142
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +2
Query: 185 SDYNIQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRYYKVDENGKIHR 364
SD I+ +T+++ Y+ P +Y+K+DENGKI R
Sbjct: 52 SDCGIKAAATIYVNCELLGGAKKRKKKVYTIPKKNNISQRKSSSPSPKYFKIDENGKISR 111
Query: 365 L 367
L
Sbjct: 112 L 112
>Z81567-5|CAB04588.2| 154|Caenorhabditis elegans Hypothetical
protein K08C9.7 protein.
Length = 154
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +2
Query: 326 RYYKVDENGKIHRL 367
+Y+K+DENGKI RL
Sbjct: 111 KYFKIDENGKISRL 124
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 89 QSEAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 217
Q + +I GI R K LED TL+ YNI++ ST+
Sbjct: 186 QIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 140 RLIFAGKQLEDGRTLSDYNIQKESTLHL 223
R++ GK LED +L+ YNIQ+ + + L
Sbjct: 237 RMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>Z83239-6|CAB05803.1| 324|Caenorhabditis elegans Hypothetical
protein T09F5.10 protein.
Length = 324
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 8 RSGGCMVWVGSR*ICKPSETYLSNLEYQSE 97
+S C W+ CKPS ++ NL Y+ E
Sbjct: 274 QSQDCFRWIAPFLKCKPSRVHIHNLLYKHE 303
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 27.5 bits (58), Expect = 5.9
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 143 LIFAGKQLEDGRTLSDYNIQKESTLHL 223
L + G++L+D R++ YNI + ++L
Sbjct: 129 LYYGGQKLQDNRSIGSYNIDQSREIYL 155
>AC024840-2|AAX55682.1| 434|Caenorhabditis elegans Hypothetical
protein Y59H11AL.1b protein.
Length = 434
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 170 LPTVYRRRSIFVDQEGCPPYLESWLHFDIRGYLGMFPKVYKFIVIL 33
LP ++ R F DQ+G P E+W +F G KVY +V++
Sbjct: 186 LPLLFTTR-FFEDQDGLPNCGENWTYFGDSG--EQVRKVYSSMVLI 228
>AC024840-1|AAF59619.2| 427|Caenorhabditis elegans Hypothetical
protein Y59H11AL.1a protein.
Length = 427
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 170 LPTVYRRRSIFVDQEGCPPYLESWLHFDIRGYLGMFPKVYKFIVIL 33
LP ++ R F DQ+G P E+W +F G KVY +V++
Sbjct: 186 LPLLFTTR-FFEDQDGLPNCGENWTYFGDSG--EQVRKVYSSMVLI 228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,511,587
Number of Sequences: 27780
Number of extensions: 191763
Number of successful extensions: 550
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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