Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_O07
(484 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 237 9e-62
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 231 6e-60
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 195 5e-49
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 188 6e-47
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 188 6e-47
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 175 3e-43
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 161 6e-39
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 161 1e-38
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 157 2e-37
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 127 1e-28
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 120 2e-26
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 100 1e-20
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 100 1e-20
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 98 8e-20
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 93 2e-18
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 91 1e-17
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 90 3e-17
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 88 1e-16
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 84 2e-15
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 81 1e-14
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 80 2e-14
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 77 2e-13
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 75 6e-13
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 72 6e-12
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 70 3e-11
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 62 5e-09
UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 52 9e-06
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 50 2e-05
UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6; Bacteri... 48 1e-04
UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa s... 47 2e-04
UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8; Gammapr... 46 4e-04
UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5; Proteob... 44 0.002
UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14; Campyl... 44 0.002
UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candida... 43 0.003
UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellula... 43 0.004
UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultu... 42 0.006
UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3; Mycopla... 42 0.007
UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex... 42 0.007
UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11; Epsilo... 42 0.010
UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11; Bacter... 41 0.013
UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 41 0.017
UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 40 0.029
UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1; Thiomic... 40 0.039
UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5; Bacteri... 40 0.039
UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing... 39 0.051
UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellula... 39 0.051
UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3; Bacteri... 38 0.090
UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9; Rickett... 38 0.12
UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9; Bacteri... 38 0.12
UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycopla... 37 0.21
UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast ... 37 0.21
UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17; ... 37 0.21
UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1; Leptosp... 37 0.27
UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8; Ma... 37 0.27
UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 37 0.27
UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellula... 37 0.27
UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2; Bacte... 37 0.27
UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2; Alphapr... 36 0.36
UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of str... 36 0.36
UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase domain-conta... 36 0.36
UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22; Bacter... 36 0.48
UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12; Bacter... 36 0.48
UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130; Bacte... 36 0.48
UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4; Plancto... 36 0.63
UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit... 34 1.5
UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52; Bacter... 34 1.5
UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144; Bacte... 34 1.5
UniRef50_Q4FUE7 Cluster: 30S ribosomal protein S17; n=16; Gammap... 34 1.9
UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19; Alphap... 34 1.9
UniRef50_A3TU64 Cluster: 30S ribosomal protein S17; n=3; Rhodoba... 33 2.6
UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983... 33 2.6
UniRef50_Q85FV4 Cluster: Chloroplast 30S ribosomal protein S17; ... 33 2.6
UniRef50_Q2JFG7 Cluster: 30S ribosomal protein S17; n=19; Bacter... 33 3.4
UniRef50_UPI0000498A1C Cluster: hypothetical protein 306.t00001;... 33 4.5
UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA methyl... 33 4.5
UniRef50_Q899R5 Cluster: Conserved protein; n=11; Clostridium|Re... 32 5.9
UniRef50_Q1NPK7 Cluster: 30S ribosomal protein S17; n=2; Proteob... 32 5.9
UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin CG... 32 7.8
UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;... 32 7.8
UniRef50_Q2PBA5 Cluster: Putative H3K9 methyltransferase; n=1; D... 32 7.8
UniRef50_Q4P4F8 Cluster: Putative uncharacterized protein; n=1; ... 32 7.8
UniRef50_Q6A6N5 Cluster: 30S ribosomal protein S17; n=133; cellu... 32 7.8
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 237 bits (580), Expect = 9e-62
Identities = 112/132 (84%), Positives = 120/132 (90%)
Frame = +2
Query: 5 EEAFQKQATVFLNRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGR 184
E+AFQKQ VFL K K K +R K+VGLGFKTPREA+EGTYIDKKCPFTGNVSIRGR
Sbjct: 49 EKAFQKQPHVFLASKVSSK-KPLRRYKSVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGR 107
Query: 185 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 364
ILTGVVQKMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDVEIGD+VT+GEC
Sbjct: 108 ILTGVVQKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFRDVEIGDVVTVGEC 167
Query: 365 RPLSKTVRFNVL 400
RPLSKTVRFNVL
Sbjct: 168 RPLSKTVRFNVL 179
Score = 52.0 bits (119), Expect = 7e-06
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 4/42 (9%)
Frame = +2
Query: 5 EEAFQKQATVFLNRKGGM----KRKDMRHSKNVGLGFKTPRE 118
E +FQKQ T+FLNRK G+ K +R+ +NVGLGFKTPRE
Sbjct: 6 ERSFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 231 bits (565), Expect = 6e-60
Identities = 108/137 (78%), Positives = 121/137 (88%), Gaps = 5/137 (3%)
Frame = +2
Query: 5 EEAFQKQATVFLNRKGGM-----KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNV 169
E A+QKQ T+F N+K + K K R+ KN+GLGFKTP+EA+EGTYIDKKCPFTGNV
Sbjct: 7 ERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNV 66
Query: 170 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 349
SIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIV
Sbjct: 67 SIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIV 126
Query: 350 TIGECRPLSKTVRFNVL 400
T+GECRPLSKTVRFNVL
Sbjct: 127 TVGECRPLSKTVRFNVL 143
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 195 bits (475), Expect = 5e-49
Identities = 89/132 (67%), Positives = 107/132 (81%)
Frame = +2
Query: 5 EEAFQKQATVFLNRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGR 184
E AFQKQ +F N K ++ R KN GLGFKTP+ A+EG+YIDKKCPFTG VSIRG+
Sbjct: 10 ERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIRGK 69
Query: 185 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 364
ILTG V KM RTIVIRR YLHY+PKYNR+EKRH+N+ VH+SP FR V++GDIVT+G+C
Sbjct: 70 ILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFR-VQVGDIVTVGQC 128
Query: 365 RPLSKTVRFNVL 400
RP+SKTVRFNV+
Sbjct: 129 RPISKTVRFNVV 140
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 188 bits (458), Expect = 6e-47
Identities = 87/136 (63%), Positives = 106/136 (77%), Gaps = 3/136 (2%)
Frame = +2
Query: 2 HEEAFQKQATVFLNRKGGMKRKD---MRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVS 172
++ AFQKQ +F N K + +K +R+ K VGLGFK P++A+EG YIDKKCPFTGNVS
Sbjct: 35 NQRAFQKQEGIFQNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNVS 94
Query: 173 IRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 352
+RG IL G+V KM RTI+IRRDYLHY+ KYNR+EKRHRN+ VH+SP F V+ GDIV
Sbjct: 95 VRGAILKGIVISTKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAFGPVKEGDIVV 154
Query: 353 IGECRPLSKTVRFNVL 400
G+CRPLSKTVRFNVL
Sbjct: 155 CGQCRPLSKTVRFNVL 170
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 188 bits (458), Expect = 6e-47
Identities = 87/132 (65%), Positives = 104/132 (78%)
Frame = +2
Query: 5 EEAFQKQATVFLNRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGR 184
E AFQKQ +F N K G R R K+VGLGFKTP EA+ G Y+DKKCPF G VSIRGR
Sbjct: 10 ERAFQKQPHIFQNAKKGAGR---RWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIRGR 66
Query: 185 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 364
ILTG V KM RTI+IRR+YLH++PKYNR+EKRH+N++ H+SP FR + GD+VT+G+C
Sbjct: 67 ILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFR-INEGDVVTVGQC 125
Query: 365 RPLSKTVRFNVL 400
RPLSKTVRFNVL
Sbjct: 126 RPLSKTVRFNVL 137
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 175 bits (427), Expect = 3e-43
Identities = 83/134 (61%), Positives = 104/134 (77%), Gaps = 5/134 (3%)
Frame = +2
Query: 14 FQKQATVFLNRKG----GMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRG 181
+QKQ +F+ +K +K+ D R+ + VGLG+KTP+ A+EGT++D KCPFTGNVSIRG
Sbjct: 11 YQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGNVSIRG 70
Query: 182 RILTGVVQKM-KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 358
RIL GVV KM+RT+V+RR+YLHY+ KY R+EKRH N SVH SP DV+ GD VT+G
Sbjct: 71 RILRGVVVSAGKMKRTVVVRRNYLHYIQKYKRYEKRHTNFSVHCSPAL-DVKEGDTVTVG 129
Query: 359 ECRPLSKTVRFNVL 400
ECRPLSKTVRFNVL
Sbjct: 130 ECRPLSKTVRFNVL 143
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 161 bits (392), Expect = 6e-39
Identities = 73/120 (60%), Positives = 94/120 (78%)
Frame = +2
Query: 41 NRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 220
+RK K +R+SK +GLGFKTP +A+ G YID+KCPFT NV IRGRIL GVV KM
Sbjct: 5 SRKHVNKSGHIRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMH 64
Query: 221 RTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 400
RTI+IRR+YLH++ KY R++KRH++++VH SP F D + GD V IG+CRPLSKT+R+NVL
Sbjct: 65 RTIIIRRNYLHFIKKYQRYQKRHKSLAVHCSPAF-DPKQGDEVVIGQCRPLSKTIRYNVL 123
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 161 bits (390), Expect = 1e-38
Identities = 70/115 (60%), Positives = 88/115 (76%)
Frame = +2
Query: 56 MKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 235
+ +K KN+G+G K P EA+ Y DKKCPF G +SIRGRIL G V KM+R+++I
Sbjct: 16 LTKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVII 75
Query: 236 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 400
RRDYLH++ KY RFEKRH+N+ H SPCFR V+ GD+VTIG+CRPLSKT+RFNVL
Sbjct: 76 RRDYLHWISKYKRFEKRHKNIPCHCSPCFR-VQEGDLVTIGQCRPLSKTIRFNVL 129
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 157 bits (380), Expect = 2e-37
Identities = 87/161 (54%), Positives = 105/161 (65%), Gaps = 29/161 (18%)
Frame = +2
Query: 5 EEAFQKQATVFLN-RKGGMKRKD----MRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNV 169
E+AF KQ VFL+ +K G +K R K++GLGFKTPREA+EGTYIDKKCPFTG V
Sbjct: 6 EKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTV 65
Query: 170 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN------------------------RF 277
SIRGRI+ G KM RTI++RR+YLH++ KY R+
Sbjct: 66 SIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISDLGCRY 125
Query: 278 EKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 400
EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNVL
Sbjct: 126 EKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFNVL 165
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 127 bits (306), Expect = 1e-28
Identities = 59/126 (46%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Frame = +2
Query: 8 EAFQKQATVFLNRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRI 187
+ F +Q V + + R GFK P A YIDKKCPFTG+V++RGR+
Sbjct: 8 KVFPRQTGVCAKPYASHEEQPKRRVNAEVCGFKAPETAYTRQYIDKKCPFTGDVNVRGRL 67
Query: 188 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRD-VEIGDIVTIGEC 364
GVV+KMK ++TIV+ +Y+HY KY R+ +RH N SVH+SPCF + +GD V GE
Sbjct: 68 FKGVVKKMKAEKTIVVVANYVHYSKKYKRYSRRHTNFSVHMSPCFEGMINVGDTVICGET 127
Query: 365 RPLSKT 382
RPLSKT
Sbjct: 128 RPLSKT 133
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 120 bits (288), Expect = 2e-26
Identities = 54/88 (61%), Positives = 69/88 (78%)
Frame = +2
Query: 137 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSP 316
IDKKCPF G +++RGRIL G V+K+KM+ T++IR DYL +L KYNRF KRH+N+ HLS
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFLKKYNRFVKRHKNIPAHLSN 82
Query: 317 CFRDVEIGDIVTIGECRPLSKTVRFNVL 400
++GDIV I ECRP+SKTVRFNV+
Sbjct: 83 LL-TCKVGDIVIIAECRPISKTVRFNVI 109
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 100 bits (240), Expect = 1e-20
Identities = 40/87 (45%), Positives = 62/87 (71%)
Frame = +2
Query: 140 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 319
D+ CPF G++ +RG+I+ G + K+ MQ++I++ R+++ Y+ K+ R+EKR R + HL C
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYMQKFERYEKRTRRYAAHLPSC 78
Query: 320 FRDVEIGDIVTIGECRPLSKTVRFNVL 400
DV +GD V I ECRPLSKT+ F V+
Sbjct: 79 IGDVNVGDSVRIMECRPLSKTITFCVI 105
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 100 bits (240), Expect = 1e-20
Identities = 49/111 (44%), Positives = 67/111 (60%)
Frame = +2
Query: 68 DMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDY 247
+ R +K++GLG K PR + D CPF GN+ +RG IL GVV +M +T+++ R+Y
Sbjct: 4 EYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREY 59
Query: 248 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 400
Y KY R+E+R + H PC D + GD V I ECRPLSKT F V+
Sbjct: 60 YRYDRKYERWERRRSRIPAHNPPCI-DAQEGDKVRIAECRPLSKTKSFVVI 109
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 98.3 bits (234), Expect = 8e-20
Identities = 43/73 (58%), Positives = 55/73 (75%)
Frame = +2
Query: 41 NRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 220
N +G K R KN+GLGFKTPREA++G Y+DKKCPFTG VSIRGRIL + + +MQ
Sbjct: 31 NLEGKRPGKVERFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILVWYLPQCEMQ 90
Query: 221 RTIVIRRDYLHYL 259
TI++ RDYLH++
Sbjct: 91 STIIVARDYLHFV 103
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 93.5 bits (222), Expect = 2e-18
Identities = 45/107 (42%), Positives = 62/107 (57%)
Frame = +2
Query: 80 SKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 259
++++GL P E + Y CPF G + +RG+IL G V KM T+VI R Y+ +
Sbjct: 2 ARDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMV 57
Query: 260 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 400
KY R+EKR + H C ++GDIVTI ECRP+SKT F V+
Sbjct: 58 SKYQRYEKRRSKIHAHNPACI-SAKVGDIVTIVECRPISKTKSFVVV 103
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 91.1 bits (216), Expect = 1e-17
Identities = 44/98 (44%), Positives = 60/98 (61%)
Frame = +2
Query: 89 VGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKY 268
+GL + P E T D+ CPF G +S+RG+ L G V M++T+V+ R+Y +PKY
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKY 58
Query: 269 NRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 382
+RF KR + H C D+ +GD VTI ECRPLSKT
Sbjct: 59 DRFMKRRSRVPAHAPDCL-DLAVGDTVTIAECRPLSKT 95
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 89.8 bits (213), Expect = 3e-17
Identities = 42/95 (44%), Positives = 60/95 (63%)
Frame = +2
Query: 116 EAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRN 295
E E D CP+ G + +RG +L GVV K + +R +V++ YL+Y KYNR+E+R +
Sbjct: 16 EPPEKVCSDPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKK 75
Query: 296 MSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 400
+ HL C V+ GD+V IGE P+SKTV+F VL
Sbjct: 76 IHAHLPDCI-SVKEGDVVVIGETMPISKTVKFTVL 109
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 87.8 bits (208), Expect = 1e-16
Identities = 45/106 (42%), Positives = 68/106 (64%)
Frame = +2
Query: 83 KNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 262
+++G+ + P +AV D KCP+ G+V +RG IL G V + M + +VI+ ++LHY P
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSP 87
Query: 263 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 400
KY R+ ++ RN+ HL C + V +GD V IGE RPL+K + F VL
Sbjct: 88 KYKRYIRKRRNIHAHLPSCIK-VNVGDYVVIGETRPLAKFISFVVL 132
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 83.8 bits (198), Expect = 2e-15
Identities = 39/108 (36%), Positives = 63/108 (58%)
Frame = +2
Query: 77 HSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY 256
+++N+GL K P E D CP+ G +S+RG++LTG V M ++ V+ R+Y Y
Sbjct: 2 YTRNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQY 57
Query: 257 LPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 400
+PKY R + + VH+ C + ++ GD V ECR L+KT+ F ++
Sbjct: 58 IPKYERKATKIKKYHVHVPDCIK-IKPGDTVRFAECRKLAKTISFVIV 104
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 81.0 bits (191), Expect = 1e-14
Identities = 40/106 (37%), Positives = 66/106 (62%)
Frame = +2
Query: 83 KNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 262
KN+G+ P +V D CP+ G++ +R ++L V+K++M + V+ ++LHY+
Sbjct: 4 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIR 60
Query: 263 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 400
KYNR+E+R + M V + C +V+ GD V I E RPLSKT+ + V+
Sbjct: 61 KYNRYERRRKRMRVRVPECI-EVKPGDKVIIAETRPLSKTIAWVVI 105
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 80.2 bits (189), Expect = 2e-14
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = +2
Query: 140 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 319
DKKCP G++ +RG G V K +T+ I ++LPKY R+E R ++ +L C
Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75
Query: 320 FRDVEIGDIVTIGECRPLSKTVRFNVL 400
+D++ GD V IGE RPLSKT F VL
Sbjct: 76 LKDIKEGDYVLIGETRPLSKTKHFVVL 102
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 77.0 bits (181), Expect = 2e-13
Identities = 48/127 (37%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Frame = -1
Query: 475 FFFTYNEVYLELFERFFGTFAF-RDLQYIEPDCLGKRPALANCDDVSDFHVPEARR*MNR 299
F F + LE F F G+ + R+ Q IE D L N D+++ F+ E+ R +
Sbjct: 38 FSFIFLGFCLE-FREFLGSRSTSRNFQNIESDSFRNWSTLTNGDNITFFN-SESWRDVGS 95
Query: 298 HVPVSLLKSVVFRQVMEIIAPDNNCSLHFHFLNNACQDTASDGHVTREWTFLINVCAFNG 119
++ VS SV+F VM++I+ DN+ ++HF N+ QD SDG+ T EWTF +NV FNG
Sbjct: 96 NILVSFFVSVIFWNVMQVISSDNDGTVHFGGNNSTGQDFTSDGNSTSEWTFFVNVRTFNG 155
Query: 118 LTGCLET 98
ET
Sbjct: 156 SFWGFET 162
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 75.4 bits (177), Expect = 6e-13
Identities = 41/107 (38%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Frame = +2
Query: 83 KNVGL-GFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 259
+++G+ G K P E D +CPF G +S+RG+IL G+V KM + IV++R +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKRYREKWS 57
Query: 260 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 400
KY R ++ + + PC + +IGDI+TI ECRPL+K F V+
Sbjct: 58 YKYQRKQRVSSKIHAYSPPCM-EAKIGDIITIAECRPLNKGSSFVVI 103
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 72.1 bits (169), Expect = 6e-12
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = +2
Query: 140 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 319
D CP+ G + +RG++L V+K+KM V +YL+Y KY R+E R + V + PC
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPC 80
Query: 320 FRDVEIGDIVTIGECRPLSKTVRFNVL 400
V+ GD V + E RPL+K+V F V+
Sbjct: 81 I-PVKPGDEVIVAETRPLAKSVSFVVI 106
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 69.7 bits (163), Expect = 3e-11
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Frame = +2
Query: 80 SKNVGLGFKTP-REAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY 256
++ +GL P REA +G DK PF G + IRG++ G + K + T+VI ++ Y
Sbjct: 2 TREIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKESPVY 58
Query: 257 LPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 400
K+ R+ + + H+ P DV GD V ECRP++K+V F V+
Sbjct: 59 FTKFKRYARGRSRIHAHV-PSNIDVREGDRVLAAECRPVAKSVSFVVV 105
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 62.5 bits (145), Expect = 5e-09
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +2
Query: 293 NMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 391
NMS+H S CFRDV IG IVT+GEC+PLSKTVRF
Sbjct: 34 NMSIHFSTCFRDVHIGHIVTVGECQPLSKTVRF 66
>UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Thermotoga
maritima
Length = 107
Score = 51.6 bits (118), Expect = 9e-06
Identities = 28/71 (39%), Positives = 41/71 (57%)
Frame = +2
Query: 188 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 367
LTG+V KM +T+V+ + L P Y ++ KR + H + +IGD+V I E R
Sbjct: 6 LTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAHDER--NECKIGDVVEIEETR 63
Query: 368 PLSKTVRFNVL 400
PLSKT R+ V+
Sbjct: 64 PLSKTKRWRVV 74
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 50.4 bits (115), Expect = 2e-05
Identities = 29/70 (41%), Positives = 38/70 (54%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 361
+I+TG V M +TI + D L PKY++F ++ R H + EIGDIV I E
Sbjct: 4 KIITGKVVSNAMDKTITVETDRLTKHPKYHKFVRKTRRYHAHDEN--NECEIGDIVEIEE 61
Query: 362 CRPLSKTVRF 391
R LSKT F
Sbjct: 62 SRKLSKTKAF 71
>UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6;
Bacteria|Rep: 30S ribosomal protein S17 - Thermus
thermophilus
Length = 105
Score = 48.0 bits (109), Expect = 1e-04
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTI--VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 355
++LTGVV KMQ+T+ ++ R + H P Y + KR + H P ++GD+V I
Sbjct: 4 KVLTGVVVSDKMQKTVTVLVERQFPH--PLYGKVIKRSKKYLAH-DP-EEKYKLGDVVEI 59
Query: 356 GECRPLSKTVRFNVL 400
E RP+SK RF VL
Sbjct: 60 IESRPISKRKRFRVL 74
>UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa sp.
PS|Rep: Ribosomal protein S17 - Beggiatoa sp. PS
Length = 100
Score = 47.2 bits (107), Expect = 2e-04
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 361
R L G V KM +TI + PKY ++ KR + VH ++GDIV I +
Sbjct: 21 RTLIGQVVSDKMHKTITVLVSRKIKHPKYGKYIKRSTKLHVHDEE--NTCQVGDIVAISQ 78
Query: 362 CRPLSKT 382
CRP+SKT
Sbjct: 79 CRPISKT 85
>UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Blochmannia floridanus
Length = 85
Score = 46.0 bits (104), Expect = 4e-04
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +2
Query: 185 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 364
+L G+V + KMQ++IV+ + + Y +F R + VH + +V GDIV I EC
Sbjct: 7 VLQGIVIRSKMQKSIVVSINRIVKHSMYKKFINRTTKIYVHDTNNISNV--GDIVEITEC 64
Query: 365 RPLSKT 382
RP+SKT
Sbjct: 65 RPISKT 70
>UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5;
Proteobacteria|Rep: 30S ribosomal protein S17 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 90
Score = 44.0 bits (99), Expect = 0.002
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 361
R+LTG V KM +T+ + D P Y +F +R + + H + GD+V I E
Sbjct: 4 RVLTGRVTSDKMDKTVTVLLDRRIMHPLYKKFIRRSKKYAAHDEE--NVCQTGDLVRIEE 61
Query: 362 CRPLSKTVRFNVL 400
C P+SK ++V+
Sbjct: 62 CAPISKRKTWSVV 74
>UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14;
Campylobacterales|Rep: 30S ribosomal protein S17 -
Campylobacter jejuni
Length = 83
Score = 43.6 bits (98), Expect = 0.002
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +2
Query: 182 RILTGVVQKMKMQRT--IVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 355
R + GVV K+ ++T +++ R +H P+Y + KR + +H +V++GD V
Sbjct: 5 REIQGVVVKIAGEKTASVLVERKVVH--PRYRKIVKRFKKYLIHDER--NEVKVGDTVVA 60
Query: 356 GECRPLSKTVRFNV 397
ECRPLSK F +
Sbjct: 61 VECRPLSKRKSFRL 74
>UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candidatus
Portiera aleyrodidarum|Rep: 30S ribosomal protein S17 -
Candidatus Portiera aleyrodidarum
Length = 83
Score = 43.2 bits (97), Expect = 0.003
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = +2
Query: 170 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 349
+I+ R + G V KM +TIV+ + L Y ++ KR + +SVH S EIGDIV
Sbjct: 4 NIKVRKIKGKVVSNKMNKTIVVLIERLFKHKTYGKYIKRSKKLSVHDSK--NKAEIGDIV 61
Query: 350 TIGECRPLSKT 382
E +SKT
Sbjct: 62 ECAESLKISKT 72
>UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 -
Dehalococcoides sp. (strain CBDB1)
Length = 90
Score = 42.7 bits (96), Expect = 0.004
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = +2
Query: 167 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 346
+ I+ + G V KM++TIV+ D + P Y + +R VH + +IGD+
Sbjct: 1 MEIKNKTRIGHVISDKMEKTIVVGIDVVKRHPLYKKTYRRTMKYLVHDEK--NEAKIGDM 58
Query: 347 VTIGECRPLSK 379
+ I ECRP+SK
Sbjct: 59 IEIVECRPISK 69
>UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultured
bacterium 562|Rep: 30S ribosomal protein S17 -
uncultured bacterium 562
Length = 95
Score = 42.3 bits (95), Expect = 0.006
Identities = 26/71 (36%), Positives = 35/71 (49%)
Frame = +2
Query: 170 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 349
S RIL+GVV K +TI ++ + P Y + KR + H IGD V
Sbjct: 3 STNPRILSGVVISDKADKTITVKIERKVKHPLYGKVMKRATKVHAHDEN--NSAAIGDQV 60
Query: 350 TIGECRPLSKT 382
T+ ECRP SK+
Sbjct: 61 TVKECRPFSKS 71
>UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3;
Mycoplasma|Rep: 30S ribosomal protein S17 - Mycoplasma
mobile
Length = 92
Score = 41.9 bits (94), Expect = 0.007
Identities = 27/74 (36%), Positives = 37/74 (50%)
Frame = +2
Query: 176 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 355
R + LTGVV K +TIV+ D P Y + K + + H + ++GDIV I
Sbjct: 7 RRKALTGVVVSDKSSKTIVVAVDTFKKDPLYQKRFKSTKKFAAHDEK--EEAQMGDIVKI 64
Query: 356 GECRPLSKTVRFNV 397
RPLSKT F +
Sbjct: 65 VGTRPLSKTKFFRL 78
>UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S17 - Aquifex
aeolicus
Length = 107
Score = 41.9 bits (94), Expect = 0.007
Identities = 26/71 (36%), Positives = 37/71 (52%)
Frame = +2
Query: 188 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 367
L GVV KM +T+V++ D P Y + + + H + +GDIV I E R
Sbjct: 17 LVGVVVSDKMDKTVVVKVDRKVPHPIYGKHIIKSKKYHAHDE--HNECRVGDIVMIRETR 74
Query: 368 PLSKTVRFNVL 400
PLSKT R+ V+
Sbjct: 75 PLSKTKRWVVV 85
>UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11;
Epsilonproteobacteria|Rep: 30S ribosomal protein S17 -
Wolinella succinogenes
Length = 88
Score = 41.5 bits (93), Expect = 0.010
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = +2
Query: 173 IRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 352
I+G+++T K TI++ R H PKY + KR + VH V++GD++
Sbjct: 11 IQGKVVTKAGDKSV---TILVERRVTH--PKYRKIVKRFKKYIVHDES--NAVKVGDMIE 63
Query: 353 IGECRPLSKTVRFNV 397
ECRPLSK F++
Sbjct: 64 AIECRPLSKRKSFSL 78
>UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11;
Bacteria|Rep: 30S ribosomal protein S17 - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 86
Score = 41.1 bits (92), Expect = 0.013
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 361
++ GVV KM++T+V+R + + P+Y + + + H V GD V I E
Sbjct: 10 KVKIGVVVSAKMEKTVVVRVERIFSHPQYLKVVRSSKKYYAHTE---LKVSEGDKVKIQE 66
Query: 362 CRPLSKTVRFNVL 400
RPLSK R+ V+
Sbjct: 67 TRPLSKLKRWRVI 79
>UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 78
Score = 40.7 bits (91), Expect = 0.017
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 361
RIL G V K +T+V+R + P + +R + H ++GD+V+I E
Sbjct: 4 RILQGTVVSDKNDKTVVVRVERRFAHPILQKTVRRSKKYKAHDEN--NQFKVGDLVSIEE 61
Query: 362 CRPLSKTVRFNVL 400
C P+SK R+ V+
Sbjct: 62 CAPISKDKRWTVV 74
>UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 -
Symbiobacterium thermophilum
Length = 94
Score = 39.9 bits (89), Expect = 0.029
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +2
Query: 194 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 373
GVV KM +T+V+ + L P Y + +R + H ++GD V I E RPL
Sbjct: 13 GVVTSDKMDKTVVVAVETLVQHPLYKKRVRRTKKFKAHDE--HNQCKVGDKVRIMETRPL 70
Query: 374 SKTVRFNVL 400
SK R+ V+
Sbjct: 71 SKEKRWRVV 79
>UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1;
Thiomicrospira crunogena XCL-2|Rep: 30S ribosomal
protein S17 - Thiomicrospira crunogena (strain XCL-2)
Length = 87
Score = 39.5 bits (88), Expect = 0.039
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 176 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 355
+ R + GVV M +++V+ + PKY +F ++ + H +GD VTI
Sbjct: 7 KARTMQGVVVSNGMDKSVVVMTNRYIKHPKYKKFVRKSTKVMAH--DADNACGVGDRVTI 64
Query: 356 GECRPLSK 379
EC P SK
Sbjct: 65 SECTPFSK 72
>UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5;
Bacteria|Rep: 30S ribosomal protein S17 - Acidobacteria
bacterium (strain Ellin345)
Length = 101
Score = 39.5 bits (88), Expect = 0.039
Identities = 25/70 (35%), Positives = 34/70 (48%)
Frame = +2
Query: 188 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 367
L G+V KMQ+TIV++ + Y R R + H + IGD V I E R
Sbjct: 16 LIGLVVSTKMQKTIVVQVERQKSHAMYGRVISRRKRFYAHDEE--QTAHIGDYVRIEETR 73
Query: 368 PLSKTVRFNV 397
PLSK R+ +
Sbjct: 74 PLSKLKRWKL 83
>UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein S17 containing protein - Tetrahymena
thermophila SB210
Length = 205
Score = 39.1 bits (87), Expect = 0.051
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 179 GRILTG-VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 355
GR L G V+Q KM +T+ ++ DY ++ PK F+ + VH S F GD V I
Sbjct: 24 GRELFGTVIQHGKMDKTVTVKVDYRYWYPKTKEFKSKTSKYQVHDSENF--CVTGDKVVI 81
Query: 356 GECRPLSKTVRFNV 397
P+S + V
Sbjct: 82 KSMLPISTMKHYYV 95
>UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellular
organisms|Rep: 30S ribosomal protein S17 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 84
Score = 39.1 bits (87), Expect = 0.051
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = +2
Query: 194 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 373
GVV KM +TI + + P Y +F + + H + IGD V I E RPL
Sbjct: 11 GVVSSNKMDKTITVAVKWKEKHPIYGKFVNKTKKYHAHDEK--NECGIGDTVRIMETRPL 68
Query: 374 SKTVRFNV 397
S+T R+ +
Sbjct: 69 SRTKRWRL 76
>UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3;
Bacteria|Rep: 30S ribosomal protein S17 - Solibacter
usitatus (strain Ellin6076)
Length = 102
Score = 38.3 bits (85), Expect = 0.090
Identities = 24/68 (35%), Positives = 32/68 (47%)
Frame = +2
Query: 194 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 373
G V KMQ+TIV+ P Y R + + H +GD+V I ECRPL
Sbjct: 16 GEVVSTKMQKTIVVEVSRRVPHPLYKRIIGKRKKFYAHDEE--GRANLGDVVRIIECRPL 73
Query: 374 SKTVRFNV 397
SK R+ +
Sbjct: 74 SKLKRWRL 81
>UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9;
Rickettsiales|Rep: 30S ribosomal protein S17 - Ehrlichia
canis (strain Jake)
Length = 83
Score = 37.9 bits (84), Expect = 0.12
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 361
++LTGVV K +TI + + Y + K+ +N VH + + GD+V I E
Sbjct: 13 KVLTGVVVATKCDKTIKVMVSRMVRHKTYKKIVKKRKNYVVHDE--YNKCKCGDVVKIQE 70
Query: 362 CRPLSKTVRFNVL 400
P+S T R+ V+
Sbjct: 71 HIPISATKRWIVI 83
>UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9;
Bacteria|Rep: 30S ribosomal protein S17 -
Corynebacterium efficiens
Length = 92
Score = 37.9 bits (84), Expect = 0.12
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 361
++ TG V KMQ+TIV+ + Y++ + ++ + H IGD+V I E
Sbjct: 15 KVRTGYVVSDKMQKTIVVELEDRKQHALYSKILRTNKKVKAHDEENIAG--IGDLVRIEE 72
Query: 362 CRPLSKTVRFNVL 400
RPLSK + ++
Sbjct: 73 TRPLSKDKNYRLI 85
>UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S17 -
Mycoplasma hyopneumoniae (strain 232)
Length = 98
Score = 37.1 bits (82), Expect = 0.21
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTIV-IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 358
+ L G+V + + +V + Y H L RF+KR + + H E+GD V I
Sbjct: 20 KTLQGIVIRTSPKTIMVEVETAYKHKLYA-KRFKKR-KKFNTHDEKNL--AEVGDFVKIA 75
Query: 359 ECRPLSKTVRFNVL 400
ECRP+SKT F ++
Sbjct: 76 ECRPISKTKHFRLV 89
>UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast
precursor; n=13; Magnoliophyta|Rep: 30S ribosomal
protein S17, chloroplast precursor - Zea mays (Maize)
Length = 132
Score = 37.1 bits (82), Expect = 0.21
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 361
R LTG V K +T+ + L PKY R E+ + H P ++GD+V +
Sbjct: 33 RQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DPD-NQFKVGDVVELQP 90
Query: 362 CRPLSKTVRF 391
RP+SKT F
Sbjct: 91 SRPISKTKHF 100
>UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17;
n=23; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S17 - Guillardia theta (Cryptomonas phi)
Length = 90
Score = 37.1 bits (82), Expect = 0.21
Identities = 24/75 (32%), Positives = 41/75 (54%)
Frame = +2
Query: 167 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 346
+SI+ R+ G+V KM +T+V+ +Y + + + VH P + ++GD+
Sbjct: 1 MSIKERL--GLVISDKMDKTVVVSIANRVTHKRYGKIVTKTKKYKVH-DPN-NNCQVGDL 56
Query: 347 VTIGECRPLSKTVRF 391
+ I E RPLSKT R+
Sbjct: 57 ILINETRPLSKTKRW 71
>UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1;
Leptospirillum sp. Group II UBA|Rep: 30S ribosomal
protein S17 - Leptospirillum sp. Group II UBA
Length = 95
Score = 36.7 bits (81), Expect = 0.27
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 194 GVVQKMKMQRTIV--IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 367
GVV KM +T+V I+R LH P Y++ R + H +E+G +V I R
Sbjct: 20 GVVVGNKMMKTVVVEIQRRVLH--PLYHKVVSRRTRIKAHTQ---EPIEVGSVVEIISTR 74
Query: 368 PLSKTVRFNVL 400
P+SK VL
Sbjct: 75 PISKDKSHRVL 85
>UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8;
Magnoliophyta|Rep: 40S ribosomal protein S17-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 105
Score = 36.7 bits (81), Expect = 0.27
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 361
+ + G V KMQ ++V+ D L + YNR+ KR H IGD V +
Sbjct: 2 KAVIGTVVSNKMQMSVVVAVDRLFHNNIYNRYVKRTSKFMAHDEK--DSCNIGDRVKLDP 59
Query: 362 CRPLSK 379
RPLSK
Sbjct: 60 SRPLSK 65
>UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 - Mycoplasma
pneumoniae
Length = 85
Score = 36.7 bits (81), Expect = 0.27
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 361
++L G+V+ K +T ++ + P Y++ RH+ H + GD V I E
Sbjct: 7 KVLIGIVKSTKNAKTATVQVESRFKHPLYHKSVVRHKKYQAHNEGEVL-AKDGDKVQIVE 65
Query: 362 CRPLSKTVRFNV 397
RPLS T RF +
Sbjct: 66 TRPLSATKRFRI 77
>UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 - Gloeobacter
violaceus
Length = 83
Score = 36.7 bits (81), Expect = 0.27
Identities = 25/69 (36%), Positives = 34/69 (49%)
Frame = +2
Query: 194 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 373
G+V MQ+T+V+ + PKY + R R H ++GD V I E PL
Sbjct: 8 GLVVSDAMQKTVVVAVENRVPHPKYKKIVVRTRKFKAHDEE--NRCKVGDRVRILESPPL 65
Query: 374 SKTVRFNVL 400
SKT R+ VL
Sbjct: 66 SKTKRWVVL 74
>UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2;
Bacteroides thetaiotaomicron|Rep: 30S ribosomal protein
S17 2 - Bacteroides thetaiotaomicron
Length = 98
Score = 36.7 bits (81), Expect = 0.27
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +2
Query: 188 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 367
+ G+V KMQ+T+VI + PKY + + + +H P + +GD V E R
Sbjct: 26 IEGIVVSTKMQKTVVIEVERTKKHPKYGKTVQYTKKYKIH-DP-LEECSVGDRVLAHETR 83
Query: 368 PLSKTVRF 391
SKT F
Sbjct: 84 HFSKTKYF 91
>UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Parvularcula bermudensis HTCC2503
Length = 93
Score = 36.3 bits (80), Expect = 0.36
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 361
RIL G + K ++T+V+R D P + +R + H ++++G V I E
Sbjct: 4 RILQGPIVSDKGEKTVVVRVDRAFKHPLLAKVVRRSKRYHAHDES--NELKVGQRVLIRE 61
Query: 362 CRPLSKTVRFNVL 400
C P SK R+ V+
Sbjct: 62 CPPKSKLKRWEVV 74
>UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 232
Score = 36.3 bits (80), Expect = 0.36
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 176 RGR-ILTGVVQKM--KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 346
RGR GVV ++ K ++I +R Y+P + HR+ H + GD+
Sbjct: 9 RGRQSFVGVVTRLGPKGSKSIKVRVTRRKYMPAILKEINFHRDFYTHDE--MMACQEGDV 66
Query: 347 VTIGECRPLSKTVRFNV 397
V I +CRP+SKT F V
Sbjct: 67 VRIEQCRPISKTKHFAV 83
>UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase
domain-containing protein YALI0D16379g; n=1; Yarrowia
lipolytica|Rep: Patatin-like phospholipase
domain-containing protein YALI0D16379g - Yarrowia
lipolytica (Candida lipolytica)
Length = 818
Score = 36.3 bits (80), Expect = 0.36
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +2
Query: 110 PREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 289
P E V+ YI K +T S+ V K KM T ++ D+ HYL Y++ EKR
Sbjct: 102 PLEPVQKEYITSKHDWTPVFSVLKN--NNSVNKRKMSHT-ALKSDFKHYLDMYDKEEKRR 158
Query: 290 RNMS 301
R S
Sbjct: 159 RGKS 162
>UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22;
Bacteria|Rep: 30S ribosomal protein S17 - Mycobacterium
bovis
Length = 135
Score = 35.9 bits (79), Expect = 0.48
Identities = 26/86 (30%), Positives = 39/86 (45%)
Frame = +2
Query: 143 KKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCF 322
K P T R + G V KMQ+TIV+ + P Y + + + + H
Sbjct: 45 KHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSV 104
Query: 323 RDVEIGDIVTIGECRPLSKTVRFNVL 400
IGD V++ E RPLS T R+ ++
Sbjct: 105 AG--IGDRVSLMETRPLSATKRWRLV 128
>UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12;
Bacteria|Rep: 30S ribosomal protein S17 - Bdellovibrio
bacteriovorus
Length = 89
Score = 35.9 bits (79), Expect = 0.48
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 176 RGRIL--TGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 349
RGR + G V KM +TI + + KY ++ K+ H +IGDIV
Sbjct: 7 RGRKIEVVGEVISDKMDKTISVLIYRMVKHAKYGKYVKKTSVFKAHDEK--NQAKIGDIV 64
Query: 350 TIGECRPLSKTVRF 391
I E RPLSKT R+
Sbjct: 65 KIRETRPLSKTKRW 78
>UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130;
Bacteria|Rep: 30S ribosomal protein S17 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 89
Score = 35.9 bits (79), Expect = 0.48
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTI--VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 355
R L G V KMQ T+ ++ R H L Y + R H+ GD+V I
Sbjct: 10 RALVGRVVSDKMQNTVTVLVERRVKHEL--YGKVITRSAKYHAHVED--GGAAAGDLVEI 65
Query: 356 GECRPLSKTVRFNV 397
ECRP+SKT + V
Sbjct: 66 EECRPISKTKSWRV 79
>UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4;
Planctomycetaceae|Rep: 30S ribosomal protein S17 -
Rhodopirellula baltica
Length = 117
Score = 35.5 bits (78), Expect = 0.63
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 361
R++ G+V KM +T + L PKY ++ +R VH + +GD V I E
Sbjct: 4 RVVAGIVTSDKMSKTRRVEIARLVKHPKYKKYIRRRTVCHVHDEN--NESGVGDKVEIIE 61
Query: 362 CRPLSKTVRFNVL 400
PLSK R+ ++
Sbjct: 62 SEPLSKLKRWRLV 74
>UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit
S17; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S17 - Schizosaccharomyces
pombe (Fission yeast)
Length = 90
Score = 34.3 bits (75), Expect = 1.5
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +2
Query: 194 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 373
G+V M +T +R + P ++ +++N V + +GD VTI CRP
Sbjct: 7 GIVISRAMPKTAKVRVAKEKFHPVVKKYVTQYQNYMVQDD---LNCNVGDAVTIQPCRPR 63
Query: 374 SKTVRFNVL 400
S T RF ++
Sbjct: 64 SATKRFEII 72
>UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52;
Bacteria|Rep: 30S ribosomal protein S17 - Xylella
fastidiosa
Length = 89
Score = 34.3 bits (75), Expect = 1.5
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +2
Query: 170 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 349
+I+GR+++ +QK T+++ R H L Y ++ KR + H + + GD+V
Sbjct: 13 TIKGRVISNKMQKTV---TVLVERQIKHAL--YGKYIKRSTKLHAHDADDLCNE--GDVV 65
Query: 350 TIGECRPLSKTVRFNVL 400
+ E P+SKT + V+
Sbjct: 66 LMTEVAPISKTKNWRVV 82
>UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144;
Bacteria|Rep: 30S ribosomal protein S17 - Burkholderia
mallei (Pseudomonas mallei)
Length = 90
Score = 34.3 bits (75), Expect = 1.5
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 361
R L G V KM +T+ + ++ P Y ++ R + H GD+V I E
Sbjct: 11 RTLVGKVVSNKMDKTVTVLVEHRVKHPIYGKYVVRSKKYHAHDEA--NTYNEGDLVEIQE 68
Query: 362 CRPLSKT 382
RP+SKT
Sbjct: 69 TRPVSKT 75
>UniRef50_Q4FUE7 Cluster: 30S ribosomal protein S17; n=16;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Psychrobacter arcticum
Length = 91
Score = 33.9 bits (74), Expect = 1.9
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +2
Query: 185 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 364
+LTG V KM ++I + + L P Y + +R + H + GD+V I E
Sbjct: 13 VLTGRVVSDKMDKSITVLIERLVRHPLYGKQLRRSTKIKAHDEN--NVCQQGDLVRIKET 70
Query: 365 RPLSKT 382
RP+SKT
Sbjct: 71 RPISKT 76
>UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Bartonella henselae (Rochalimaea henselae)
Length = 79
Score = 33.9 bits (74), Expect = 1.9
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 361
R+L GVV K +T+V++ + + P + ++ + H +IGD + I E
Sbjct: 4 RVLQGVVVSDKNDKTVVVKVERRYSHPLLKKTVRQSKKYKAHDES--NQFKIGDQIFIQE 61
Query: 362 CRPLSKTVRFNVL 400
+P+SK R+ V+
Sbjct: 62 SKPISKDKRWIVV 74
>UniRef50_A3TU64 Cluster: 30S ribosomal protein S17; n=3;
Rhodobacteraceae|Rep: 30S ribosomal protein S17 -
Oceanicola batsensis HTCC2597
Length = 109
Score = 33.5 bits (73), Expect = 2.6
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTIVI--RRDYLH-YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 352
RIL GVV +T+ + R + H L K R K++R F+ GDIV
Sbjct: 4 RILRGVVTSDANAQTVTVSVERRFTHPVLQKTIRKSKKYRAHDA--DNAFKK---GDIVR 58
Query: 353 IGECRPLSKTVRFNVL 400
I EC P SKT R+ V+
Sbjct: 59 IQECAPKSKTKRWEVM 74
>UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983;
n=1; Thermoplasma acidophilum|Rep: Putative
uncharacterized protein Ta0983 - Thermoplasma
acidophilum
Length = 322
Score = 33.5 bits (73), Expect = 2.6
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2
Query: 233 IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 361
IRRD L+ + +YNR R + + P F IG+IV IGE
Sbjct: 182 IRRDDLNRIDRYNRIRITGRR--IRMKPLFEVASIGNIVGIGE 222
>UniRef50_Q85FV4 Cluster: Chloroplast 30S ribosomal protein S17;
n=1; Cyanidioschyzon merolae|Rep: Chloroplast 30S
ribosomal protein S17 - Cyanidioschyzon merolae (Red
alga)
Length = 82
Score = 33.5 bits (73), Expect = 2.6
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 188 LTGVVQKMKMQRTIVI--RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 361
L G+V +MQ+T+++ + H L Y + + + +VH P + +G+++ I
Sbjct: 4 LLGLVVSCRMQKTVIVEVKTQVKHAL--YGKRIMKKKRYAVH-DP-EKKASLGELIWIRT 59
Query: 362 CRPLSKTVRF 391
CRP+SKT ++
Sbjct: 60 CRPISKTKKW 69
>UniRef50_Q2JFG7 Cluster: 30S ribosomal protein S17; n=19;
Bacteria|Rep: 30S ribosomal protein S17 - Frankia sp.
(strain CcI3)
Length = 102
Score = 33.1 bits (72), Expect = 3.4
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +2
Query: 182 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 361
++ G+V KM +T+V+ + P Y + +R + + H +GD V + E
Sbjct: 25 KVREGLVVSDKMTKTVVVAVEDRVQHPLYGKTIRRTKKVKAHDES--GTTGVGDRVLLME 82
Query: 362 CRPLSKTVRFNVL 400
RPLS T R+ ++
Sbjct: 83 TRPLSATKRWRIV 95
>UniRef50_UPI0000498A1C Cluster: hypothetical protein 306.t00001;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 306.t00001 - Entamoeba histolytica HM-1:IMSS
Length = 499
Score = 32.7 bits (71), Expect = 4.5
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +2
Query: 137 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY----LPKYNRFEKRHRNMSV 304
+ K C F ++ ++ +I++ +V K+ M ++RR Y + K+ K N
Sbjct: 315 LGKYCYFKDDILLQPQIISAIVSKLSMTDKTILRRGYWMLSNISVSKFPETTKAIINSGA 374
Query: 305 HLSPCFRDVEIGDIVTIGE-CRPLSKTV 385
LS C +E D+ E C L+ T+
Sbjct: 375 FLSSCCTILETNDVKIKSEACWLLANTI 402
>UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase); n=2;
Sulfolobus|Rep: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase) - Sulfolobus
solfataricus
Length = 378
Score = 32.7 bits (71), Expect = 4.5
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +2
Query: 32 VFLNRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDK----KCPFTGNV-SIRGRILTG 196
+F+ + G ++ D +K++ + PR + T++++ KCP G + SI G + G
Sbjct: 221 LFVRVENGARKADDNINKHLKYFGECPRCGFQ-TFVEENCKTKCPVCGEIFSIIGPLYIG 279
Query: 197 VVQKMKMQRTIVIRRDYLHYLPKYNRFEK 283
+ M+ + I+ +YL +NR +K
Sbjct: 280 PLYSMEFLKRIMDLYSNFNYLTSFNRIQK 308
>UniRef50_Q899R5 Cluster: Conserved protein; n=11; Clostridium|Rep:
Conserved protein - Clostridium tetani
Length = 191
Score = 32.3 bits (70), Expect = 5.9
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 77 HSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRI-LTGVVQKMKMQRT 226
H +N+G F + G+ ++K P GN+SI G + ++G ++ M +Q T
Sbjct: 107 HIQNIGKVFVEDKPLKPGSAVNKDLPPVGNLSITGIVNISGTLEFMVLQNT 157
>UniRef50_Q1NPK7 Cluster: 30S ribosomal protein S17; n=2;
Proteobacteria|Rep: 30S ribosomal protein S17 - delta
proteobacterium MLMS-1
Length = 86
Score = 32.3 bits (70), Expect = 5.9
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +2
Query: 176 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 355
R + G+V KM++TIVI Y ++ +R + ++GD V I
Sbjct: 7 RKKTQEGLVISNKMEKTIVIETTRFTPHKLYGKYIRRR--VKYLADDPEGTCQVGDRVLI 64
Query: 356 GECRPLSKTVRFNV 397
ECRPLS+ R+ +
Sbjct: 65 EECRPLSRRKRWRL 78
>UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin
CG33103-PB, isoform B isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Papilin CG33103-PB,
isoform B isoform 1 - Apis mellifera
Length = 2807
Score = 31.9 bits (69), Expect = 7.8
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 248 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 373
L+ +P+ RF RH+ M + +PC +VE D+ G+C P+
Sbjct: 140 LNCMPRGERFFYRHKLMVIDGTPC--EVEKNDVCVGGKCMPV 179
>UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 147
Score = 31.9 bits (69), Expect = 7.8
Identities = 24/97 (24%), Positives = 37/97 (38%)
Frame = +2
Query: 44 RKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQR 223
R G +R+D + N G RE V GT+ K TG S G +TG +
Sbjct: 39 RHGIARRRDAQQHGNTSHGHTAAREHVTGTHNSKGSHVTGTHSSTGTHVTGTHGSTETCH 98
Query: 224 TIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 334
++ + + + RHR+ H + D E
Sbjct: 99 MDAQQQGNARHRDAQQQGKARHRDPGQHGNTYHMDAE 135
>UniRef50_Q2PBA5 Cluster: Putative H3K9 methyltransferase; n=1;
Drosophila nasutoides|Rep: Putative H3K9
methyltransferase - Drosophila nasutoides
Length = 640
Score = 31.9 bits (69), Expect = 7.8
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 176 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 355
RGRI V+++++MQR+ +RR L L K+ + H N SP R V D+ +I
Sbjct: 336 RGRIEERVLRRLQMQRSCHLRRKQLQKLAKF----EAHMNTVEQPSPPIRVVNDSDLDSI 391
>UniRef50_Q4P4F8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 125
Score = 31.9 bits (69), Expect = 7.8
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +2
Query: 188 LTGVVQK---MKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 358
+ G+V K M T+ + R +H PK + RH+ VH + +GD +
Sbjct: 6 IEGIVTKAGVMAKTVTVTVERRLIH--PKLLKPYIRHKKYLVHDEN--NSLSVGDKIVAS 61
Query: 359 ECRPLSKTVRFNV 397
CRPLS RF +
Sbjct: 62 ACRPLSARKRFTL 74
>UniRef50_Q6A6N5 Cluster: 30S ribosomal protein S17; n=133; cellular
organisms|Rep: 30S ribosomal protein S17 -
Propionibacterium acnes
Length = 90
Score = 31.9 bits (69), Expect = 7.8
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 158 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 337
T + R ++ G+V KM +TI + + P Y + + + H + +
Sbjct: 5 TAERTTRRKVREGLVVSDKMNKTITVMVEDRVKHPLYGKVMTKSVRLKAHDEN--NEAGM 62
Query: 338 GDIVTIGECRPLSKTVRFNVL 400
GD V I E RPLS T R+ ++
Sbjct: 63 GDRVRIMETRPLSATKRWRLV 83
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,076,252
Number of Sequences: 1657284
Number of extensions: 9872951
Number of successful extensions: 24549
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 23858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24499
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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