Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_O06
(407 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 168 7e-42
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 168 7e-42
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 168 7e-42
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 168 7e-42
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 168 7e-42
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 168 7e-42
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 168 7e-42
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 168 7e-42
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 168 7e-42
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 168 7e-42
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 168 7e-42
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 168 7e-42
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 168 7e-42
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 168 7e-42
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 165 7e-41
BC009431-1|AAH09431.1| 559|Homo sapiens family with sequence si... 29 6.0
AY358207-1|AAQ88574.1| 559|Homo sapiens WTNF5791 protein. 29 6.0
AK054664-1|BAB70787.1| 559|Homo sapiens protein ( Homo sapiens ... 29 6.0
AY049721-1|AAL06645.1| 2696|Homo sapiens androgen receptor assoc... 29 8.0
AK055187-1|BAB70868.1| 1059|Homo sapiens protein ( Homo sapiens ... 29 8.0
AF395588-1|AAL40694.1| 2696|Homo sapiens putative nuclear protei... 29 8.0
AF380302-1|AAL27991.1| 2427|Homo sapiens androgen receptor-assoc... 29 8.0
AF322907-1|AAK92049.1| 2596|Homo sapiens NSD1 protein. 29 8.0
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 168 bits (408), Expect = 7e-42
Identities = 77/121 (63%), Positives = 91/121 (75%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125
Query: 405 L 407
L
Sbjct: 126 L 126
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 168 bits (408), Expect = 7e-42
Identities = 77/121 (63%), Positives = 91/121 (75%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 L 407
L
Sbjct: 126 L 126
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 168 bits (408), Expect = 7e-42
Identities = 77/121 (63%), Positives = 91/121 (75%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125
Query: 405 L 407
L
Sbjct: 126 L 126
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 168 bits (408), Expect = 7e-42
Identities = 77/121 (63%), Positives = 91/121 (75%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 L 407
L
Sbjct: 126 L 126
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 168 bits (408), Expect = 7e-42
Identities = 77/121 (63%), Positives = 91/121 (75%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 L 407
L
Sbjct: 126 L 126
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 168 bits (408), Expect = 7e-42
Identities = 77/121 (63%), Positives = 91/121 (75%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 L 407
L
Sbjct: 126 L 126
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 168 bits (408), Expect = 7e-42
Identities = 77/121 (63%), Positives = 91/121 (75%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 L 407
L
Sbjct: 126 L 126
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 168 bits (408), Expect = 7e-42
Identities = 77/121 (63%), Positives = 91/121 (75%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 L 407
L
Sbjct: 126 L 126
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 168 bits (408), Expect = 7e-42
Identities = 77/121 (63%), Positives = 91/121 (75%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 L 407
L
Sbjct: 126 L 126
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 168 bits (408), Expect = 7e-42
Identities = 77/121 (63%), Positives = 91/121 (75%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 L 407
L
Sbjct: 126 L 126
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 168 bits (408), Expect = 7e-42
Identities = 77/121 (63%), Positives = 91/121 (75%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 L 407
L
Sbjct: 126 L 126
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 168 bits (408), Expect = 7e-42
Identities = 77/121 (63%), Positives = 91/121 (75%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 L 407
L
Sbjct: 126 L 126
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 168 bits (408), Expect = 7e-42
Identities = 77/121 (63%), Positives = 91/121 (75%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 L 407
L
Sbjct: 126 L 126
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 168 bits (408), Expect = 7e-42
Identities = 77/121 (63%), Positives = 91/121 (75%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 L 407
L
Sbjct: 126 L 126
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 165 bits (400), Expect = 7e-41
Identities = 76/121 (62%), Positives = 90/121 (74%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRC TVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 L 407
L
Sbjct: 126 L 126
>BC009431-1|AAH09431.1| 559|Homo sapiens family with sequence
similarity 55, member C protein.
Length = 559
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 6 RLRSGKSFKMGKGNNMIPNGHFHKD-W--QRFVKTWFNQP 116
R++ S ++ +G+ P+G+++KD W ++F FN P
Sbjct: 305 RIKETNSLELSQGSGTFPSGYYYKDQWRPRKFKMRQFNDP 344
>AY358207-1|AAQ88574.1| 559|Homo sapiens WTNF5791 protein.
Length = 559
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 6 RLRSGKSFKMGKGNNMIPNGHFHKD-W--QRFVKTWFNQP 116
R++ S ++ +G+ P+G+++KD W ++F FN P
Sbjct: 305 RIKETNSLELSQGSGTFPSGYYYKDQWRPRKFKMRQFNDP 344
>AK054664-1|BAB70787.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ30102 fis, clone BNGH41000137, weakly similar to
BRUSH BORDER 61.9 KD PROTEIN PRECURSOR. ).
Length = 559
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 6 RLRSGKSFKMGKGNNMIPNGHFHKD-W--QRFVKTWFNQP 116
R++ S ++ +G+ P+G+++KD W ++F FN P
Sbjct: 305 RIKETNSLELSQGSGTFPSGYYYKDQWRPRKFKMRQFNDP 344
>AY049721-1|AAL06645.1| 2696|Homo sapiens androgen receptor associated
coregulator 267-b protein.
Length = 2696
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +2
Query: 200 RCSLPYCALSYKSSCRQRIYPT--*NKGFWIEPFFC 301
RC LP C Y C Q+ PT NKGF C
Sbjct: 1605 RCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHIC 1640
>AK055187-1|BAB70868.1| 1059|Homo sapiens protein ( Homo sapiens
cDNA FLJ30625 fis, clone CTONG2001820, highly similar to
Mus musculus NSD1 protein mRNA. ).
Length = 1059
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +2
Query: 200 RCSLPYCALSYKSSCRQRIYPT--*NKGFWIEPFFC 301
RC LP C Y C Q+ PT NKGF C
Sbjct: 568 RCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHIC 603
>AF395588-1|AAL40694.1| 2696|Homo sapiens putative nuclear protein
NSD1 protein.
Length = 2696
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +2
Query: 200 RCSLPYCALSYKSSCRQRIYPT--*NKGFWIEPFFC 301
RC LP C Y C Q+ PT NKGF C
Sbjct: 1605 RCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHIC 1640
>AF380302-1|AAL27991.1| 2427|Homo sapiens androgen receptor-associated
coregulator 267-a protein.
Length = 2427
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +2
Query: 200 RCSLPYCALSYKSSCRQRIYPT--*NKGFWIEPFFC 301
RC LP C Y C Q+ PT NKGF C
Sbjct: 1336 RCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHIC 1371
>AF322907-1|AAK92049.1| 2596|Homo sapiens NSD1 protein.
Length = 2596
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +2
Query: 200 RCSLPYCALSYKSSCRQRIYPT--*NKGFWIEPFFC 301
RC LP C Y C Q+ PT NKGF C
Sbjct: 1502 RCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHIC 1537
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,886,689
Number of Sequences: 237096
Number of extensions: 1006706
Number of successful extensions: 5148
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5148
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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