Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_O04
(509 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5KM95 Cluster: Expressed protein; n=1; Filobasidiella ... 34 1.6
UniRef50_Q9W4G6 Cluster: CG2861-PA, isoform A; n=2; Drosophila m... 33 2.8
UniRef50_Q04360 Cluster: Transcriptional regulator IE63 homolog;... 33 2.8
UniRef50_UPI0000E20B55 Cluster: PREDICTED: similar to protocadhe... 33 3.8
UniRef50_Q09AZ4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_Q0JDQ2 Cluster: Os04g0386500 protein; n=2; Oryza sativa... 32 6.6
UniRef50_Q2L3W9 Cluster: Nuclear receptor; n=9; Arthropoda|Rep: ... 32 6.6
UniRef50_A7RR34 Cluster: Predicted protein; n=1; Nematostella ve... 32 8.7
>UniRef50_Q5KM95 Cluster: Expressed protein; n=1; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 657
Score = 34.3 bits (75), Expect = 1.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 265 RSMRRASTGARRRSPPTDWIGRLSSPWGAEPGPDTPLTP-APRNKTRIS 408
R R R + P DW+ R + G PG +T ++P PR++TR++
Sbjct: 112 RERERERDRDREKKPLFDWLARKLTTAGRRPGIETTMSPKQPRSRTRLT 160
>UniRef50_Q9W4G6 Cluster: CG2861-PA, isoform A; n=2; Drosophila
melanogaster|Rep: CG2861-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 1893
Score = 33.5 bits (73), Expect = 2.8
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 249 APRVTRAPRVTRAPHVTRVTRAPHVTRV 166
AP+V +APRV +AP V + R P RV
Sbjct: 674 APKVPKAPRVPKAPRVPKAPRVPKAPRV 701
Score = 31.9 bits (69), Expect = 8.7
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3
Query: 249 APRVTRAPRVTRAPHVTRVTRAP 181
APRV +APRV +AP V + R P
Sbjct: 680 APRVPKAPRVPKAPRVPKAPRVP 702
>UniRef50_Q04360 Cluster: Transcriptional regulator IE63 homolog;
n=9; Lymphocryptovirus|Rep: Transcriptional regulator
IE63 homolog - Epstein-Barr virus (strain B95-8) (HHV-4)
(Human herpesvirus 4)
Length = 438
Score = 33.5 bits (73), Expect = 2.8
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = -3
Query: 249 APRVTRAPRVTRAPHVTRVTRAP 181
APRV RAPR RAP R TR P
Sbjct: 118 APRVPRAPRSPRAPRSNRATRGP 140
Score = 32.3 bits (70), Expect = 6.6
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = -3
Query: 249 APRVTRAPRVTRAPHVTRVTRAPHVTR 169
APR RAPRV RAP R R+ TR
Sbjct: 112 APRAPRAPRVPRAPRSPRAPRSNRATR 138
>UniRef50_UPI0000E20B55 Cluster: PREDICTED: similar to protocadherin
1 isoform 2 precursor; n=1; Pan troglodytes|Rep:
PREDICTED: similar to protocadherin 1 isoform 2
precursor - Pan troglodytes
Length = 728
Score = 33.1 bits (72), Expect = 3.8
Identities = 22/42 (52%), Positives = 24/42 (57%)
Frame = +2
Query: 65 GGVGRAGRCALVSTARLLHAALDEGGGAAASASHTRVTWGAR 190
GG GRAG CA +S AA AAA+ASHTR GAR
Sbjct: 170 GGRGRAGLCAPLSAGSA--AAAAAAAAAAAAASHTRGA-GAR 208
>UniRef50_Q09AZ4 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 636
Score = 32.7 bits (71), Expect = 5.0
Identities = 25/59 (42%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
Frame = +2
Query: 260 PRAL*GGRVQARVAGALRPTGSADCRLLGELNRDQTRL-------LLPRPGTKQESLDP 415
PRAL Q V G L PT D L+ R Q RL LPRPG E LDP
Sbjct: 91 PRALQEYLTQLLVEGELGPTARVDAALVVLQQRGQHRLHGEILGGQLPRPGPLDELLDP 149
>UniRef50_Q0JDQ2 Cluster: Os04g0386500 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os04g0386500 protein -
Oryza sativa subsp. japonica (Rice)
Length = 174
Score = 32.3 bits (70), Expect = 6.6
Identities = 17/50 (34%), Positives = 20/50 (40%)
Frame = +1
Query: 256 DTTRSMRRASTGARRRSPPTDWIGRLSSPWGAEPGPDTPLTPAPRNKTRI 405
+ R RR R R PP + S G PGP PL P PR +
Sbjct: 15 ENIRPTRRRGGERRHRRPPAEIPTTQQSCDGVLPGPRAPLAPRPRRSRHL 64
>UniRef50_Q2L3W9 Cluster: Nuclear receptor; n=9; Arthropoda|Rep:
Nuclear receptor - Blattella germanica (German
cockroach)
Length = 570
Score = 32.3 bits (70), Expect = 6.6
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 286 TGARRRSPPTDWIGRLSSPWGAEPGPDTPLTPAP 387
T + +R P DW LSSP GP PLTP+P
Sbjct: 110 TSSNKRPRPDDW---LSSPSPGSAGPLPPLTPSP 140
>UniRef50_A7RR34 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 169
Score = 31.9 bits (69), Expect = 8.7
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 262 TRSMRRASTGARRRSPPTDWIGRLSSPWGAEPGPDTPLTPAPRNKTRISRS 414
T++M + R+ + P + R SP A P D+P+ +PRN + + S
Sbjct: 82 TKAMTENAQQKRKSASPKQEVARTPSPAKASPRRDSPVQASPRNASPLQGS 132
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 418,732,775
Number of Sequences: 1657284
Number of extensions: 7466751
Number of successful extensions: 32155
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32080
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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