Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_O04
         (509 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    26   0.22 
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   3.7  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   4.8  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   4.8  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   6.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   6.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.4  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 25.8 bits (54), Expect = 0.22
 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = +2

Query: 116 LHAALDEGGGAAASASHTRVTWG-ARVTRVTW 208
           LH     GGGA  SA H  +  G  R   VTW
Sbjct: 317 LHVDAAWGGGALVSAKHRHLLKGIERADSVTW 348


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1

Query: 259 TTRSMRRASTGARRRSPPTDWIGRLSSP 342
           TTR M   +     + PP D  G L SP
Sbjct: 338 TTRLMSSFAFDNNDQGPPQDGAGNLISP 365


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 343 WGAEPGPDTP 372
           WGA   PDTP
Sbjct: 479 WGASQWPDTP 488


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 390 PGRGSKRRVWSRFSSPRRRQS 328
           P   S + V   FSSPRRR S
Sbjct: 218 PVLASYKSVPMSFSSPRRRHS 238


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1

Query: 259 TTRSMRRASTGARRRSPPTDWIGRLSSP 342
           TTR M   +     + PP D  G L SP
Sbjct: 337 TTRLMSSFAFDNNDQGPPQDDAGNLISP 364


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1

Query: 259 TTRSMRRASTGARRRSPPTDWIGRLSSP 342
           TTR M   +     + PP D  G L SP
Sbjct: 338 TTRLMSSFAFDNNDQGPPQDDAGNLISP 365


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 60   LLEVSGVPGAARSSLPLGYYMQHSMKVEEPPP 155
            ++    VPG   +S+ +    QHS+ V   PP
Sbjct: 988  IITAEEVPGGPPTSIRVETNDQHSLVVYWKPP 1019


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 483 PDTXIINRLYTNLSEILVYDPAFGS 409
           P   +IN LY N++   V +P   +
Sbjct: 382 PKNPLINILYANMNSYSVPEPTIST 406


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,070
Number of Sequences: 336
Number of extensions: 1534
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)