Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_O03
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 221 8e-57
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 217 2e-55
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 203 2e-51
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 200 2e-50
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 164 1e-39
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 159 3e-38
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 154 1e-36
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 153 2e-36
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 152 4e-36
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 152 4e-36
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 151 7e-36
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 147 1e-34
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 147 1e-34
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 147 2e-34
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 145 5e-34
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 145 6e-34
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 124 9e-28
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 115 6e-25
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 111 7e-24
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 110 2e-23
UniRef50_A7U5X2 Cluster: DEAD-box helicase 15; n=2; Plasmodium f... 108 9e-23
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 107 2e-22
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 106 4e-22
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 105 5e-22
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 105 8e-22
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 104 1e-21
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 103 2e-21
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 103 3e-21
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 103 3e-21
UniRef50_Q4QFH1 Cluster: ATP-dependent RNA helicase, putative; n... 103 3e-21
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 102 4e-21
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 102 4e-21
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 102 6e-21
UniRef50_A5K917 Cluster: DEAD/DEAH box helicase, putative; n=4; ... 101 8e-21
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 100 2e-20
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 100 2e-20
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 100 2e-20
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 100 2e-20
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 99 3e-20
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 99 3e-20
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 100 4e-20
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 100 4e-20
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 99 5e-20
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 99 7e-20
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 98 9e-20
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 98 1e-19
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 98 1e-19
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 97 3e-19
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 97 3e-19
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 97 3e-19
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 96 5e-19
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 95 7e-19
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 95 9e-19
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 95 1e-18
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 95 1e-18
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 95 1e-18
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 94 2e-18
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 94 2e-18
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 94 2e-18
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 94 2e-18
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 94 2e-18
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 93 3e-18
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 93 3e-18
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 93 3e-18
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 93 3e-18
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 93 3e-18
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 93 4e-18
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 93 5e-18
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 93 5e-18
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 93 5e-18
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 93 5e-18
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 92 6e-18
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 92 8e-18
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 91 1e-17
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 91 1e-17
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 91 1e-17
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 91 1e-17
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 91 1e-17
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 91 1e-17
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 91 1e-17
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 91 2e-17
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 91 2e-17
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 90 2e-17
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 90 2e-17
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 90 2e-17
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 90 2e-17
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 90 2e-17
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 90 2e-17
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 90 2e-17
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 90 2e-17
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 90 3e-17
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 89 4e-17
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 89 6e-17
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 89 6e-17
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 89 6e-17
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 89 6e-17
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 89 8e-17
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 89 8e-17
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 89 8e-17
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 89 8e-17
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 89 8e-17
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 88 1e-16
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 88 1e-16
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 88 1e-16
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 88 1e-16
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 88 1e-16
UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2... 88 1e-16
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 88 1e-16
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 87 2e-16
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 87 2e-16
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 87 2e-16
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 87 2e-16
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 87 2e-16
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 87 2e-16
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 87 2e-16
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 87 2e-16
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 87 2e-16
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 87 2e-16
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 87 2e-16
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 87 3e-16
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 87 3e-16
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 87 3e-16
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 86 4e-16
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 86 4e-16
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 86 4e-16
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 86 4e-16
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 86 4e-16
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 86 4e-16
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 86 4e-16
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 86 5e-16
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 86 5e-16
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 86 5e-16
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 86 5e-16
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 86 5e-16
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 85 7e-16
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 85 7e-16
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 85 7e-16
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 85 9e-16
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 85 9e-16
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 85 1e-15
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 84 2e-15
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 84 2e-15
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 84 2e-15
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 84 2e-15
UniRef50_Q4HZ68 Cluster: ATP-dependent RNA helicase DBP7; n=1; G... 84 2e-15
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 84 2e-15
UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome s... 84 2e-15
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 84 2e-15
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 84 2e-15
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 84 2e-15
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 84 2e-15
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 84 2e-15
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 83 3e-15
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 83 3e-15
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 83 3e-15
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 83 3e-15
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 83 3e-15
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 83 3e-15
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 83 3e-15
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 83 3e-15
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 83 3e-15
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 83 4e-15
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 83 4e-15
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 83 4e-15
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 83 4e-15
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 83 4e-15
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 83 4e-15
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 83 4e-15
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 83 4e-15
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 83 5e-15
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 83 5e-15
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 83 5e-15
UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;... 83 5e-15
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 83 5e-15
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 83 5e-15
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 82 7e-15
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 82 7e-15
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 82 7e-15
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 82 7e-15
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 82 7e-15
UniRef50_Q1JTF7 Cluster: ATP-dependent RNA helicase, putative; n... 82 7e-15
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 82 7e-15
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 82 7e-15
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 82 9e-15
UniRef50_Q08BL1 Cluster: Zgc:153386; n=2; Danio rerio|Rep: Zgc:1... 82 9e-15
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 82 9e-15
UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lambl... 82 9e-15
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 81 1e-14
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 81 1e-14
UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole gen... 81 1e-14
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 81 1e-14
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 81 1e-14
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 81 1e-14
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 81 1e-14
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 81 2e-14
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 81 2e-14
UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole geno... 81 2e-14
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 81 2e-14
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 81 2e-14
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 81 2e-14
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 80 3e-14
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 80 3e-14
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 80 3e-14
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 80 3e-14
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 80 3e-14
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 80 3e-14
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 80 3e-14
UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia theta... 80 3e-14
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 80 3e-14
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 80 3e-14
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 80 3e-14
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 80 3e-14
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 80 3e-14
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 80 3e-14
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 79 5e-14
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 79 5e-14
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 79 5e-14
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 79 5e-14
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 79 5e-14
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 79 5e-14
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 79 5e-14
UniRef50_UPI0000ECBDA5 Cluster: ATP-dependent RNA helicase DDX24... 79 6e-14
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 79 6e-14
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 79 6e-14
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 79 6e-14
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 79 6e-14
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 79 6e-14
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 79 6e-14
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 79 6e-14
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 79 6e-14
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 79 6e-14
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 79 8e-14
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 79 8e-14
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 79 8e-14
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 79 8e-14
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 78 1e-13
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 78 1e-13
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 78 1e-13
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 78 1e-13
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 78 1e-13
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 78 1e-13
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 78 1e-13
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 78 1e-13
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 78 1e-13
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 78 1e-13
UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 78 1e-13
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 78 1e-13
UniRef50_Q4P7M1 Cluster: ATP-dependent RNA helicase DBP9; n=2; U... 78 1e-13
UniRef50_UPI00015B6103 Cluster: PREDICTED: similar to CG8611-PB;... 77 2e-13
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 77 2e-13
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 77 2e-13
UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole gen... 77 2e-13
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 77 2e-13
UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 77 2e-13
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 77 2e-13
UniRef50_A5KC62 Cluster: DEAD/DEAH box helicase, putative; n=10;... 77 2e-13
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 77 2e-13
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 77 2e-13
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 77 2e-13
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 77 2e-13
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 77 2e-13
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 77 2e-13
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 77 2e-13
UniRef50_A5DUB2 Cluster: ATP-dependent RNA helicase MAK5; n=5; S... 77 2e-13
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 77 2e-13
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 77 2e-13
UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;... 77 3e-13
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 77 3e-13
UniRef50_Q5BXN2 Cluster: SJCHGC07723 protein; n=1; Schistosoma j... 77 3e-13
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 77 3e-13
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 77 3e-13
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 77 3e-13
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 77 3e-13
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 76 4e-13
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 76 4e-13
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 76 4e-13
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 76 4e-13
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 76 4e-13
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 76 4e-13
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 76 4e-13
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 76 4e-13
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 76 4e-13
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 76 4e-13
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 76 4e-13
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 76 4e-13
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 76 4e-13
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 76 4e-13
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 76 4e-13
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 76 6e-13
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 76 6e-13
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 76 6e-13
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 76 6e-13
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 76 6e-13
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 75 8e-13
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 75 8e-13
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 75 8e-13
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 8e-13
UniRef50_Q5C2I6 Cluster: SJCHGC04550 protein; n=1; Schistosoma j... 75 8e-13
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 75 8e-13
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 75 8e-13
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 75 8e-13
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 75 8e-13
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 75 8e-13
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 75 1e-12
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 75 1e-12
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 75 1e-12
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 75 1e-12
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 75 1e-12
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 75 1e-12
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 75 1e-12
UniRef50_Q7RFI2 Cluster: Drosophila melanogaster BcDNA.GH02833; ... 75 1e-12
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 75 1e-12
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 74 2e-12
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 74 2e-12
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 74 2e-12
UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma j... 74 2e-12
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 74 2e-12
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 74 2e-12
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 74 2e-12
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 74 2e-12
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 74 2e-12
UniRef50_Q4RM08 Cluster: Chromosome 10 SCAF15019, whole genome s... 74 2e-12
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 74 2e-12
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 74 2e-12
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 74 2e-12
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 74 2e-12
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 74 2e-12
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 74 2e-12
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 74 2e-12
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 74 2e-12
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 74 2e-12
UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 74 2e-12
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 73 3e-12
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 73 3e-12
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 73 3e-12
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 73 3e-12
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 73 3e-12
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 73 3e-12
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 73 4e-12
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 73 4e-12
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 73 4e-12
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 73 4e-12
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 73 4e-12
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 73 4e-12
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 73 4e-12
UniRef50_A6RSH5 Cluster: Putative uncharacterized protein; n=2; ... 73 4e-12
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 73 4e-12
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 73 5e-12
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 73 5e-12
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 73 5e-12
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 73 5e-12
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 73 5e-12
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 73 5e-12
UniRef50_Q9C8S9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 73 5e-12
UniRef50_Q93Y39 Cluster: DEAD-box ATP-dependent RNA helicase 13;... 73 5e-12
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 73 5e-12
UniRef50_Q6BZR4 Cluster: ATP-dependent RNA helicase DBP9; n=1; Y... 73 5e-12
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 72 7e-12
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 72 7e-12
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 72 7e-12
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 72 7e-12
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 72 7e-12
UniRef50_Q754J2 Cluster: ATP-dependent RNA helicase DBP7; n=1; E... 72 7e-12
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 72 9e-12
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 72 9e-12
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 72 9e-12
UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein; ... 72 9e-12
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 72 9e-12
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 72 9e-12
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 72 9e-12
UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 72 9e-12
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 72 9e-12
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 71 1e-11
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 71 1e-11
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 71 1e-11
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 71 1e-11
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 71 1e-11
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 71 1e-11
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 71 1e-11
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 71 1e-11
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 71 1e-11
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 71 2e-11
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 71 2e-11
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 71 2e-11
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 71 2e-11
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 71 2e-11
UniRef50_Q1E7Y4 Cluster: ATP-dependent RNA helicase MAK5; n=11; ... 71 2e-11
UniRef50_Q5K7L2 Cluster: ATP-dependent RNA helicase DBP9; n=1; F... 71 2e-11
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 71 2e-11
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 71 2e-11
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 71 2e-11
UniRef50_Q56X76 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 71 2e-11
UniRef50_Q5KC99 Cluster: ATP-dependent RNA helicase MAK5; n=2; F... 71 2e-11
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 70 3e-11
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 70 3e-11
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 70 3e-11
UniRef50_Q4UG97 Cluster: ATP-dependent RNA helicase, putative; n... 70 3e-11
UniRef50_A5K5I2 Cluster: Putative uncharacterized protein; n=1; ... 70 3e-11
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 70 3e-11
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 70 3e-11
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 70 3e-11
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 70 4e-11
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 70 4e-11
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 70 4e-11
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 70 4e-11
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 70 4e-11
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 70 4e-11
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 70 4e-11
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 70 4e-11
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 69 5e-11
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 69 5e-11
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 69 5e-11
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 69 5e-11
UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein; ... 69 5e-11
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 69 5e-11
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 69 5e-11
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 69 5e-11
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 69 5e-11
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 69 5e-11
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 69 7e-11
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 69 7e-11
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 69 7e-11
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 69 7e-11
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 69 7e-11
UniRef50_A7U5X3 Cluster: DEAD-box helicase 18; n=7; Plasmodium|R... 69 7e-11
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 69 7e-11
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 69 7e-11
UniRef50_UPI0000498707 Cluster: DEAD/DEAH box helicase; n=1; Ent... 69 9e-11
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 69 9e-11
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 69 9e-11
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 69 9e-11
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 69 9e-11
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 69 9e-11
UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n... 69 9e-11
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 69 9e-11
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 69 9e-11
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 69 9e-11
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 69 9e-11
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 69 9e-11
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 69 9e-11
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 69 9e-11
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 69 9e-11
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 69 9e-11
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 69 9e-11
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 69 9e-11
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 68 1e-10
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 68 1e-10
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 68 1e-10
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 68 1e-10
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 68 1e-10
UniRef50_Q7R5J2 Cluster: GLP_487_115413_117311; n=1; Giardia lam... 68 1e-10
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 68 1e-10
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 68 1e-10
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 68 1e-10
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 68 2e-10
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 68 2e-10
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 68 2e-10
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 68 2e-10
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 68 2e-10
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 68 2e-10
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 68 2e-10
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 68 2e-10
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 68 2e-10
UniRef50_Q6BKH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 68 2e-10
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 68 2e-10
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 68 2e-10
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 67 2e-10
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 67 2e-10
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 67 2e-10
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 67 2e-10
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 67 2e-10
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w... 67 2e-10
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 67 2e-10
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 67 2e-10
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 67 2e-10
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 67 2e-10
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 67 2e-10
UniRef50_P38112 Cluster: ATP-dependent RNA helicase MAK5; n=6; S... 67 2e-10
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 67 2e-10
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 67 3e-10
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 67 3e-10
UniRef50_UPI000049A17D Cluster: helicase; n=1; Entamoeba histoly... 66 3e-10
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 66 3e-10
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 66 3e-10
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 66 3e-10
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 66 3e-10
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 66 3e-10
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 66 3e-10
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 66 3e-10
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 66 3e-10
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 66 3e-10
UniRef50_A5K3V9 Cluster: RNA helicase, putative; n=3; Plasmodium... 66 3e-10
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 66 3e-10
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 66 3e-10
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 66 5e-10
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 66 5e-10
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 66 5e-10
UniRef50_Q7PDQ7 Cluster: Similar ATP-dependent RNA Helicase; n=2... 66 5e-10
UniRef50_Q4P0P9 Cluster: Putative uncharacterized protein; n=1; ... 66 5e-10
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 221 bits (540), Expect = 8e-57
Identities = 111/162 (68%), Positives = 128/162 (79%)
Frame = +2
Query: 35 FEEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXX 214
FEE YD A+FY MNLSRPLLKA+ ++N+V+PTPIQAATIPVAL+G+D+
Sbjct: 144 FEECTNYDTLATFYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAATGTG 203
Query: 215 XXXXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGG 394
YMLP LERLLY+ G VTRVL+LVPTRELG QV+ VT+QLSQFT+V VGLSVGG
Sbjct: 204 KTAAYMLPTLERLLYRPLDG-AVTRVLVLVPTRELGVQVYQVTKQLSQFTSVEVGLSVGG 262
Query: 395 LDVKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
LDVK QESVLR+NPDIVIATPGRLIDH+ NTP+F L IEVL
Sbjct: 263 LDVKVQESVLRKNPDIVIATPGRLIDHLANTPTFSLDTIEVL 304
>UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p
- Drosophila melanogaster (Fruit fly)
Length = 782
Score = 217 bits (529), Expect = 2e-55
Identities = 103/155 (66%), Positives = 124/155 (80%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
++ SFY MNLSRPL++AIG L Y++PTPIQA+TIPVALLG+D+ YML
Sbjct: 154 EQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYML 213
Query: 236 PILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQE 415
P LERLLY+ +TRVL+LVPTRELGAQV+ VT+QL QFTT+ VGL++GGLDVK QE
Sbjct: 214 PTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQE 273
Query: 416 SVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+VLR+NPDIVIATPGRLIDHI+NTPSF L +IEVL
Sbjct: 274 AVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVL 308
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 203 bits (495), Expect = 2e-51
Identities = 101/166 (60%), Positives = 121/166 (72%)
Frame = +2
Query: 23 DSDFFEEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXX 202
+S F E+ YDE+ +F MNLSRPLLKAI A+++ PTPIQ A IPV LLGKD+
Sbjct: 167 NSGFSEDASQYDESLTFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAA 226
Query: 203 XXXXXXXXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGL 382
+MLP+LERL+YK + VTRVL+LVPTRELG QVH VTRQL+QFT VT L
Sbjct: 227 TGTGKTAAFMLPVLERLIYKPREAP-VTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCL 285
Query: 383 SVGGLDVKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+VGGLDVK QE+ LR PD++IATPGRLIDH+ N PSF L+ IEVL
Sbjct: 286 AVGGLDVKTQEAALRSGPDVLIATPGRLIDHLHNCPSFSLNCIEVL 331
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 200 bits (487), Expect = 2e-50
Identities = 101/163 (61%), Positives = 118/163 (72%)
Frame = +2
Query: 32 FFEEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXX 211
FFE+ YDEN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLGKD+
Sbjct: 207 FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGT 266
Query: 212 XXXXXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVG 391
+ LP+LERL+YK + VTRVL+LVPTRELG QVH+VTRQL+QF +T L+VG
Sbjct: 267 GKTAAFALPVLERLIYKPRQAP-VTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVG 325
Query: 392 GLDVKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
GLDVK QE+ LR PDI+IATPGRLIDH+ N PSF L +IEVL
Sbjct: 326 GLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVL 368
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 164 bits (398), Expect = 1e-39
Identities = 84/152 (55%), Positives = 100/152 (65%)
Frame = +2
Query: 62 NASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPI 241
N SF MNLSR +LKA Y PTPIQ A IPVAL GKD+ ++LPI
Sbjct: 147 NVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPI 206
Query: 242 LERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESV 421
LER++Y+ KG TRVL+LVPTREL QV V R+LS F + V L GGLD+K QE+
Sbjct: 207 LERMIYRPKGAS-CTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAA 265
Query: 422 LRRNPDIVIATPGRLIDHIRNTPSFGLHAIEV 517
LR PD+V+ATPGRLIDH+ N+PSF L IEV
Sbjct: 266 LRSGPDVVVATPGRLIDHLHNSPSFNLSNIEV 297
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 159 bits (387), Expect = 3e-38
Identities = 79/153 (51%), Positives = 112/153 (73%), Gaps = 2/153 (1%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F ++LSRP+LK + +L YV P+PIQ+ATIP+ALLGKD+ +M+PI+E
Sbjct: 232 NFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIE 291
Query: 248 RLLYK-AKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTT-VTVGLSVGGLDVKYQESV 421
RLLYK AK TRV++L+PTREL QV V +Q+++F + +T GL+VGGL+++ QE +
Sbjct: 292 RLLYKPAKIAS--TRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQM 349
Query: 422 LRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
L+ PDIVIATPGR IDHIRN+ SF + ++E+L
Sbjct: 350 LKSRPDIVIATPGRFIDHIRNSASFNVDSVEIL 382
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 154 bits (373), Expect = 1e-36
Identities = 77/160 (48%), Positives = 105/160 (65%)
Frame = +2
Query: 41 EPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXX 220
+P E +SF M+LSRP+L+ + ++ + PTPIQA TIP++L+GKDV
Sbjct: 285 QPKKKGEMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKT 344
Query: 221 XXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLD 400
+++PILERLLY+ K TRV+IL PTREL Q H V +L+ T + L+VGGL
Sbjct: 345 AAFVVPILERLLYRPKKVP-TTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLS 403
Query: 401 VKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+K QE+ LR PD+VIATPGR IDH+RN+ SF + IE+L
Sbjct: 404 LKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEIL 443
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 153 bits (372), Expect = 2e-36
Identities = 76/151 (50%), Positives = 97/151 (64%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F ++LSRPL +A AL Y PTPIQAA IP+A+ G+DV +MLP LE
Sbjct: 149 AFDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGRDVCGRAVTGSGKTAAFMLPQLE 208
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
R+L++ T VL+LVPTREL QVH +T L+QFTT+ L VGGL Q + LR
Sbjct: 209 RMLHRGPRPAAATHVLVLVPTRELAVQVHQMTESLAQFTTIRAVLVVGGLSANVQAAALR 268
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
P+IV+ATPGR+IDH+RNT SFGL + L
Sbjct: 269 TRPEIVVATPGRVIDHVRNTHSFGLEDLATL 299
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 152 bits (369), Expect = 4e-36
Identities = 77/153 (50%), Positives = 101/153 (66%)
Frame = +2
Query: 62 NASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPI 241
++SF MNLSRP+LK + L + PT IQ TIP+ALLGKD+ +++PI
Sbjct: 258 HSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPI 317
Query: 242 LERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESV 421
LERLLY+ K TRVLIL PTREL Q H+V +++ FT + V L +GGL +K QE
Sbjct: 318 LERLLYRPKKVP-TTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQE 376
Query: 422 LRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
LR+ PDIVIATPGR IDH+RN+ F + IE++
Sbjct: 377 LRKRPDIVIATPGRFIDHMRNSQGFTVENIEIM 409
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 152 bits (369), Expect = 4e-36
Identities = 74/152 (48%), Positives = 102/152 (67%)
Frame = +2
Query: 65 ASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPIL 244
+SF M+LSRP+L+ + ++ + PTPIQA TIP+AL+GKDV +++PIL
Sbjct: 276 SSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPIL 335
Query: 245 ERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVL 424
ERLLY+ K TRV++L PTREL Q H+V +L+ T + L+VGGL +K QE L
Sbjct: 336 ERLLYRPKKVP-TTRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKVQEGEL 394
Query: 425 RRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
R PD+VIATPGR IDH+RN+ SF + +E+L
Sbjct: 395 RLRPDVVIATPGRFIDHMRNSASFAVETVEIL 426
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 151 bits (367), Expect = 7e-36
Identities = 79/151 (52%), Positives = 100/151 (66%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F +NLSRPLL+A L Y PTPIQAA IP+AL G+D+ + LP LE
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
RLL++ K TRVLIL PTREL Q+H++ + L+QFT + GL VGGL V+ QE VLR
Sbjct: 228 RLLFRPKRVF-ATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLR 286
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
PDIV+ATPGR+IDH+RN+ S L + VL
Sbjct: 287 SMPDIVVATPGRMIDHLRNSMSVDLDDLAVL 317
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 147 bits (357), Expect = 1e-34
Identities = 70/151 (46%), Positives = 102/151 (67%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF NLSRP+L+ + A+N+ +PTPIQ TIPVALLGKD+ +++PILE
Sbjct: 791 SFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE 850
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
RLL++ + +RV IL+PTREL Q + V +L+ +T +T VGG ++ QE+VL+
Sbjct: 851 RLLFRPRKVP-TSRVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQENVLK 909
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+ PD++IATPGR IDH+RN+ SF + +E+L
Sbjct: 910 KRPDVIIATPGRFIDHMRNSASFTVDTLEIL 940
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 147 bits (357), Expect = 1e-34
Identities = 74/158 (46%), Positives = 106/158 (67%), Gaps = 3/158 (1%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
D +SF +LSRP+L+A+ +L++ PTPIQ+ TIP+AL GKD+ +M+
Sbjct: 330 DAESSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMI 389
Query: 236 PILERLLYKAKGG---DRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVK 406
P +ERL ++AK + +RVLIL PTREL Q ++V + +++FT + L VGGL VK
Sbjct: 390 PTIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVGGLSVK 449
Query: 407 YQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
QE+ L+ P++VIATPGRLIDH+RN+ SF L IE+L
Sbjct: 450 SQEAELKLRPEVVIATPGRLIDHVRNSASFTLDDIEIL 487
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 147 bits (356), Expect = 2e-34
Identities = 82/171 (47%), Positives = 105/171 (61%), Gaps = 5/171 (2%)
Frame = +2
Query: 23 DSDFFEEPPPYDEN--ASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXX 196
D+ F +P D +SF MNLSRPLL+A+ +L + PTPIQA IP+ALLG+D+
Sbjct: 206 DAFFSSDPTTTDPTLPSSFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGS 265
Query: 197 XXXXXXXXXXYMLPILERLLYKAKG-GDRVTRVLILVPTRELGAQVHTVTRQLSQ--FTT 367
+M+PILERL Y+ +G G RVL+L PTREL Q V + L++
Sbjct: 266 AVTGSGKTAAFMVPILERLCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLD 325
Query: 368 VTVGLSVGGLDVKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
V L VGGL + Q LR PDI+IATPGRLIDH+ NTPSF L A++VL
Sbjct: 326 VRFALLVGGLSLNAQAHTLRTLPDILIATPGRLIDHLTNTPSFTLSALDVL 376
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 145 bits (352), Expect = 5e-34
Identities = 76/155 (49%), Positives = 100/155 (64%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
+E +F ++LSRPLLKA+ L + PTPIQA IP+AL GKD+ ++L
Sbjct: 187 EELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLL 246
Query: 236 PILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQE 415
P+LERLL++ R RVLIL+PTREL Q +V L+QF+ +T L VGGL K QE
Sbjct: 247 PVLERLLFR-DSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQE 305
Query: 416 SVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
LR++PD+VIATPGRLIDH+ N GL +E+L
Sbjct: 306 VELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEIL 340
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 145 bits (351), Expect = 6e-34
Identities = 77/177 (43%), Positives = 110/177 (62%), Gaps = 6/177 (3%)
Frame = +2
Query: 8 ATIEYDSDFF--EEPPPYDENA----SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVA 169
A IE FF EE P + + SF +LSRP+L+ + ++ + PTPIQ TIPVA
Sbjct: 280 AEIEKQKSFFAPEEKPSANGDLKSAKSFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVA 339
Query: 170 LLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQ 349
LLGKDV +++PILERLLY+ + +RV IL+PTREL Q + V +
Sbjct: 340 LLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVP-TSRVAILMPTRELAVQCYNVATK 398
Query: 350 LSQFTTVTVGLSVGGLDVKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
L+ FT +T VGG ++ QE++L++ PD++IATPGR IDH+RN+ SF + +E+L
Sbjct: 399 LATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEIL 455
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 124 bits (300), Expect = 9e-28
Identities = 68/167 (40%), Positives = 101/167 (60%), Gaps = 2/167 (1%)
Frame = +2
Query: 26 SDFFE-EPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXX 202
+DFF+ E P ++ SF + LS +++A+ +N+ PTP+Q TIP+AL G+DV
Sbjct: 2 TDFFDTETPLPNDVESFEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDVCASAV 61
Query: 203 XXXXXXXXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGL 382
+++P +ERLL ++K + TR +IL PTREL AQ ++V Q+ QFT +T L
Sbjct: 62 TGSGKTAAFLIPTVERLL-RSKSTEAQTRAVILSPTRELAAQTYSVLSQIIQFTPLTALL 120
Query: 383 SVGG-LDVKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
GG +VK +E L PD ++ TPGR+IDHI+N F L + VL
Sbjct: 121 LTGGSSNVKEEEERLLEYPDFLVCTPGRIIDHIKNCEGFTLENVLVL 167
>UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12217_14094 - Giardia lamblia
ATCC 50803
Length = 625
Score = 115 bits (277), Expect = 6e-25
Identities = 62/151 (41%), Positives = 87/151 (57%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
S+ ++LSR L +A+ L + PT +Q IP+ L G+D + +P+LE
Sbjct: 2 SWQGLSLSRQLTRAVLRLGWKFPTTVQEKVIPIVLAGRDALVSAVTGSGKTGAFGIPLLE 61
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
R++ + + T LIL PTREL AQ V ++L+ FT V L +GG D Q + LR
Sbjct: 62 RMILRGRDTYGTT-ALILSPTRELAAQTAAVLQELAYFTNFRVYLLIGGTDTAKQAAQLR 120
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
PDI++ATPGRLID +RNT +F L IEVL
Sbjct: 121 TEPDIIVATPGRLIDLVRNTVNFSLDTIEVL 151
>UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Pseudomonas putida W619
Length = 621
Score = 111 bits (268), Expect = 7e-24
Identities = 61/150 (40%), Positives = 86/150 (57%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F L LLKA+ L +V PTP+QAA IP+AL G+D+ ++LP+L R
Sbjct: 184 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLNR 243
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
L+ KG R LIL+PTREL Q + SQFT + GL GG D K Q ++LR+
Sbjct: 244 LV-DLKGARVEIRALILLPTRELAQQTLKQVQLFSQFTYIKAGLVTGGEDFKEQAAMLRK 302
Query: 431 NPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
PD++I TPGRL++ + N + L ++V+
Sbjct: 303 VPDVLIGTPGRLLEQL-NAGNLDLSHVQVM 331
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 110 bits (264), Expect = 2e-23
Identities = 57/147 (38%), Positives = 92/147 (62%)
Frame = +2
Query: 80 MNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLY 259
+ L +PLLKA+ + Y PT IQ+ IP AL GKD+ +++PIL++ Y
Sbjct: 195 LGLIKPLLKAVEEMQYEFPTNIQSLAIPAALQGKDLLASSLTGSGKTAAFLIPILQKF-Y 253
Query: 260 KAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPD 439
++ + ++ LI+ PTREL Q++ V +L+++T + L +G ++ QE+ LR NP+
Sbjct: 254 RSPFTN-YSKALIVTPTRELAFQIYEVFTKLNKYTKLRACLVIGQSAMQKQEAELRGNPE 312
Query: 440 IVIATPGRLIDHIRNTPSFGLHAIEVL 520
++IATPGRLIDH++N+ S L +EVL
Sbjct: 313 VIIATPGRLIDHLQNSRSIDLDNLEVL 339
>UniRef50_A7U5X2 Cluster: DEAD-box helicase 15; n=2; Plasmodium
falciparum|Rep: DEAD-box helicase 15 - Plasmodium
falciparum
Length = 717
Score = 108 bits (259), Expect = 9e-23
Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 9/164 (5%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
D N + + +SRP LK + + +PT IQ IP+AL GK + ++L
Sbjct: 84 DMNCLWSDLYISRPFLKVLYEQKFSNPTYIQRDVIPLALEGKSILANSETGSGKTLAFVL 143
Query: 236 PILERLLYKA---------KGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSV 388
PILERLL KG +T+ LIL+PTREL Q + V R L+++ T+T L
Sbjct: 144 PILERLLQSVNIKMRRNNMKGSYNITKALILLPTRELSLQCYDVIRSLTKYVTITYSLFC 203
Query: 389 GGLDVKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
GG+D+K QE ++ DI + TPGR++D + N+ S ++ +E++
Sbjct: 204 GGIDIKQQEYEFKKRNDIFVCTPGRILDLLLNSSSDFINYLEIV 247
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 107 bits (257), Expect = 2e-22
Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Frame = +2
Query: 56 DEN-ASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYM 232
DEN +F +N+++P+L A+ Y HPTPIQA IP AL G+D+ ++
Sbjct: 40 DENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFV 99
Query: 233 LPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQ-FTTVTVGLSVGGLDVKY 409
+P+L+R L +A D++T+ LIL PTREL QVH R S+ + VGG
Sbjct: 100 IPVLDR-LSRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNG 158
Query: 410 QESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
Q + L++ +++ATPGRL+DHI N L ++E+L
Sbjct: 159 QITALKKGVQVIVATPGRLLDHI-NAGRVDLSSLEIL 194
>UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Saccharophagus degradans (strain 2-40 / ATCC
43961 / DSM 17024)
Length = 436
Score = 106 bits (254), Expect = 4e-22
Identities = 52/138 (37%), Positives = 79/138 (57%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + L + L KA+ L + PT +Q TIP L GKD+ ++LP+L +
Sbjct: 3 FSELGLHQSLQKALDKLTFTKPTDVQVQTIPAVLAGKDIMVSAKTGSGKTAAFLLPMLHK 62
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
L + TR LIL+PTREL Q Q + +T + VGL +GG K+Q + +R+
Sbjct: 63 FLNDPRPNTS-TRALILLPTRELALQTVKAFEQFAGYTQIKVGLIMGGEAYKHQVATVRK 121
Query: 431 NPDIVIATPGRLIDHIRN 484
NP++++ATPGRL++HI+N
Sbjct: 122 NPEVLVATPGRLVEHIKN 139
>UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 564
Score = 105 bits (253), Expect = 5e-22
Identities = 52/153 (33%), Positives = 88/153 (57%)
Frame = +2
Query: 62 NASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPI 241
+ F+ + L++ L+KA Y HPT +QA IP+ + GKDV ++LPI
Sbjct: 115 DTEFHQLKLNKALVKACHDQGYTHPTNVQAKIIPIIMNGKDVLASSCTGSGKTAAFLLPI 174
Query: 242 LERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESV 421
++R + + ++ LI++PTREL Q + +L+++ T L +G + ++ QE+
Sbjct: 175 MQR--FGNLKNLQYSKALIILPTRELALQCFEMFEKLNKYANCTAALVIGAVPIQQQETE 232
Query: 422 LRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
LR+ PDI+IATPGR +D + N+ S + IE+L
Sbjct: 233 LRKYPDIIIATPGRTVDLLTNSSSLEIQNIEIL 265
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 105 bits (251), Expect = 8e-22
Identities = 62/152 (40%), Positives = 81/152 (53%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
++ F M LS P+ K I Y PTPIQ TIPV L GKDV ++LP
Sbjct: 94 KSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLP 153
Query: 239 ILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
+ ERL K R LIL PTREL Q T++L +FT + L +GG ++ Q +
Sbjct: 154 MFERL--KTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMEDQFA 211
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSFGLHAIE 514
L NPDI+IATPGRL+ H+ S L ++E
Sbjct: 212 ALHENPDIIIATPGRLV-HVAVEMSLKLQSVE 242
>UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase;
n=3; Cryptosporidium|Rep: Drs1p, eIF4a-1-family RNA SFII
helicase - Cryptosporidium parvum Iowa II
Length = 573
Score = 104 bits (249), Expect = 1e-21
Identities = 61/160 (38%), Positives = 90/160 (56%), Gaps = 13/160 (8%)
Frame = +2
Query: 80 MNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLY 259
+ LSRPLLKA+ LN+V T IQ IP+AL G+D+ ++LP LERLL
Sbjct: 35 LELSRPLLKALSDLNFVEATLIQKEVIPLALSGRDIMAEAETGSGKTAAFLLPALERLLR 94
Query: 260 K------------AKGGDRVTRVLILVPTRELGAQVHTVTRQLSQF-TTVTVGLSVGGLD 400
GG T+VL+L+P+REL Q V L+++ +T + GG++
Sbjct: 95 SPYVRNSRVSSLGRVGGAVGTKVLVLLPSRELAMQCFGVLESLTKYCPVITRAVVTGGMN 154
Query: 401 VKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
++ QE +L+ P IVIATPGR++D + NT S L +E++
Sbjct: 155 IQQQERILKCQPHIVIATPGRILDMLLNTLSIQLELLEII 194
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 103 bits (248), Expect = 2e-21
Identities = 54/137 (39%), Positives = 82/137 (59%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F +L + +LK I AL + T +Q TIP AL +D+ +++P+L+
Sbjct: 2 FQSFSLDQRILKGIEALGFTKATDVQQQTIPEALKQQDLMVCARTGSGKTAAFVVPMLQH 61
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
LL K + TR LILVPTREL Q+ + L++FT + G+ GG + K+Q ++ R+
Sbjct: 62 LLTH-KAPNSGTRALILVPTRELAKQLLKQCQALAKFTGIQSGMITGGQEFKFQAALFRK 120
Query: 431 NPDIVIATPGRLIDHIR 481
NP+I+IATPGRLIDH++
Sbjct: 121 NPEIIIATPGRLIDHLK 137
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 103 bits (246), Expect = 3e-21
Identities = 53/137 (38%), Positives = 77/137 (56%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F ++L LLKA+ L + PTPIQA IP A+ G+DV ++LPIL +
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
L+ + +G TR L++ PTREL AQ+ L+ T ++ GG+ ++ QE RR
Sbjct: 63 LIDRPRG---TTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRR 119
Query: 431 NPDIVIATPGRLIDHIR 481
D++I TPGRL+DH R
Sbjct: 120 GVDVLIGTPGRLLDHFR 136
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 103 bits (246), Expect = 3e-21
Identities = 52/138 (37%), Positives = 79/138 (57%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + LS +L+A+ L + PTPIQ +IP + G+D+ ++LP+L
Sbjct: 2 TFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLH 61
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
++ + G R R L+L PTREL Q+H + +++ L VGG+D QE L+
Sbjct: 62 KIAEGRRHGIR-NRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNLK 120
Query: 428 RNPDIVIATPGRLIDHIR 481
RN DIV+ATPGRL+DH+R
Sbjct: 121 RNWDIVVATPGRLLDHVR 138
>UniRef50_Q4QFH1 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 648
Score = 103 bits (246), Expect = 3e-21
Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 11/158 (6%)
Frame = +2
Query: 80 MNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLY 259
+ L + L++A+ L Y+ PTP+QA IP AL G DV ++LP+ LL
Sbjct: 5 LGLCKALIRAVSHLGYISPTPVQAEAIPAALRGVDVCARAVTGSGKTAAFLLPLAHLLLT 64
Query: 260 KA-------KGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTT-VTVGLSVGGLDVKYQE 415
+ R R ++L+PTRELG Q + QL QFT+ +TV L++GG+ QE
Sbjct: 65 RQPQKATALNSRRRFIRAVVLLPTRELGVQCQDMLAQLLQFTSGLTVALAIGGVAPAAQE 124
Query: 416 SVLRRNPDIVIATPGRLIDHI---RNTPSFGLHAIEVL 520
+ L PDI++ATPGRL+D+I +N L +EVL
Sbjct: 125 AALDAVPDILVATPGRLVDYIHNYKNGAGLDLTGVEVL 162
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 102 bits (245), Expect = 4e-21
Identities = 58/152 (38%), Positives = 83/152 (54%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
++ F M LS P+ K + Y PTPIQ TIPV L GKDV +++P
Sbjct: 148 KSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLIP 207
Query: 239 ILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
+ E+L KA R L+L PTREL Q T++L +FT + + L +GG ++ Q +
Sbjct: 208 MFEKL--KAHSAQAGARALVLSPTRELALQTGKFTKELGKFTGLKMALILGGDRMEDQFA 265
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSFGLHAIE 514
L NPDI+IATPGRL+ H+ + L ++E
Sbjct: 266 ALHENPDIIIATPGRLM-HVAVEMNLKLQSVE 296
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 102 bits (245), Expect = 4e-21
Identities = 62/150 (41%), Positives = 80/150 (53%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + L L++ + A+ YV PTP+Q IPV L G+D+ + LP+L R
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVLAR 62
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
L GG RV L+L PTRELGAQV T R +FT V + GG+ Q S LR
Sbjct: 63 LGGHRPGGPRV---LVLEPTRELGAQVETAFRDFGRFTDVRSTIIHGGVGYGKQRSDLRA 119
Query: 431 NPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
DIVIAT GRL+D I+ L ++EVL
Sbjct: 120 GTDIVIATVGRLMDFIKE-KEIRLDSVEVL 148
>UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3;
Deltaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Desulfovibrio desulfuricans (strain G20)
Length = 530
Score = 102 bits (244), Expect = 6e-21
Identities = 51/138 (36%), Positives = 77/138 (55%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF +L L++A+ A +V+PTPIQ +P AL G+D+ ++LP+L
Sbjct: 57 SFARFSLHPALIEAVSARGFVNPTPIQEKALPPALAGQDILGLAATGTGKTAAFVLPLLH 116
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
RLL + + R L++ PTREL AQ+H + L++F + GG+ + Q LR
Sbjct: 117 RLLLQGESARGTLRALVVAPTRELVAQIHEEVKTLARFCRLRSATVYGGVGMHAQTVQLR 176
Query: 428 RNPDIVIATPGRLIDHIR 481
DIV+A PGRL+DH+R
Sbjct: 177 TGVDIVLACPGRLLDHVR 194
>UniRef50_A5K917 Cluster: DEAD/DEAH box helicase, putative; n=4;
Plasmodium|Rep: DEAD/DEAH box helicase, putative -
Plasmodium vivax
Length = 737
Score = 101 bits (243), Expect = 8e-21
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 8/163 (4%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
D N + + +SRP LK + + +PT IQ IP+AL GK + ++L
Sbjct: 101 DRNTLWSDLYISRPFLKVLYEGKFNNPTFIQRDVIPLALEGKSILANSETGSGKTLAFVL 160
Query: 236 PILERLLYKAKGGDR--------VTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVG 391
PILERLL+ R VT+ LIL+PTREL Q + V + ++++ ++T L G
Sbjct: 161 PILERLLHSPNIKMRSYNPRSVCVTKSLILLPTRELALQCYDVVKSMTKYVSITYSLFCG 220
Query: 392 GLDVKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
G+DVK QE ++ DI I TPGR++D + N+ S ++ +EV+
Sbjct: 221 GIDVKQQEYEYKKKKDIFICTPGRILDLLLNSSSDFINYLEVV 263
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 100 bits (240), Expect = 2e-20
Identities = 59/152 (38%), Positives = 79/152 (51%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
++ F M LS P+ K + Y PTPIQ TIPV L GKDV +++P
Sbjct: 35 KSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLIP 94
Query: 239 ILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
+ ERL KA R LIL PTREL Q T++L +FT + L +GG + Q +
Sbjct: 95 MFERL--KAPQAQTGARALILSPTRELALQTMKFTKELGKFTKLKTALILGGDSMDDQFA 152
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSFGLHAIE 514
L NPDI+I TPGRL+ H+ + L +E
Sbjct: 153 ALHENPDIIIGTPGRLM-HVIKEMNLKLQNVE 183
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 100 bits (239), Expect = 2e-20
Identities = 62/158 (39%), Positives = 84/158 (53%), Gaps = 5/158 (3%)
Frame = +2
Query: 62 NASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPI 241
+A+F L+ +LKAI Y PTPIQA IPV L G+DV + LPI
Sbjct: 10 DATFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPI 69
Query: 242 LERLLYKAKGGD----RVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKY 409
++RLL +A R LIL PTREL QV ++ T + + GG+D+
Sbjct: 70 IQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNP 129
Query: 410 QESVLRRNPDIVIATPGRLIDHI-RNTPSFGLHAIEVL 520
Q + LRR +I+IATPGRL+DH+ + T + G I VL
Sbjct: 130 QMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVL 167
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 100 bits (239), Expect = 2e-20
Identities = 55/143 (38%), Positives = 78/143 (54%)
Frame = +2
Query: 44 PPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXX 223
P D+ F + LS P+ +AI + Y+HPTPIQA IPV L+G+DV
Sbjct: 216 PEEVDDRPLFADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTA 275
Query: 224 XYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDV 403
+ LP+++ +L + R+ R LIL PTREL QV + Q+ + L +GG +
Sbjct: 276 SFTLPMMD-ILSDRRARARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESM 334
Query: 404 KYQESVLRRNPDIVIATPGRLID 472
Q VL + D++IATPGRLID
Sbjct: 335 NDQRDVLSKGVDVLIATPGRLID 357
>UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70;
Eukaryota|Rep: ATP-dependent RNA helicase HAS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 505
Score = 100 bits (239), Expect = 2e-20
Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 1/151 (0%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + LS+P LKAI + + T +QA TIP L G+DV +++P +E
Sbjct: 44 FEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIE- 102
Query: 251 LLYKAKGGDRV-TRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
LL+ K R T ++++ PTREL Q+ V R+L +F + T G+ +GG + + + L
Sbjct: 103 LLHSLKFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLM 162
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+ +++IATPGRL+DH++NT F ++ L
Sbjct: 163 KGVNMLIATPGRLLDHLQNTKGFVFKNLKAL 193
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 99 bits (238), Expect = 3e-20
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF L+ P+ +A+ NYV PTPIQA TIP AL G+DV + LPIL
Sbjct: 17 SFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTASFALPILH 76
Query: 248 RLL-YKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVL 424
RLL ++ K + TRVL+L PTREL Q+ + ++ L++GG+ + Q L
Sbjct: 77 RLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPMGRQVRSL 136
Query: 425 RRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+ ++++ATPGRL+D +++ L ++E L
Sbjct: 137 MQGVEVLVATPGRLLDLVQSN-GLKLGSVEFL 167
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 99 bits (238), Expect = 3e-20
Identities = 55/145 (37%), Positives = 79/145 (54%), Gaps = 4/145 (2%)
Frame = +2
Query: 56 DENA---SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXX 226
DE+A F + L+ PLL+AI +Y PTPIQA +IPV L G D+
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAA 110
Query: 227 YMLPILERLLY-KAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDV 403
++LPIL R+ +A+ R R L+L PTREL Q+ R +FT +V + +GG
Sbjct: 111 FVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKP 170
Query: 404 KYQESVLRRNPDIVIATPGRLIDHI 478
Q + D+++ATPGRL+DH+
Sbjct: 171 GPQARRMESGVDLLVATPGRLLDHV 195
>UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Moritella sp. PE36|Rep: ATP-dependent RNA
helicase, DEAD box family - Moritella sp. PE36
Length = 460
Score = 99.5 bits (237), Expect = 4e-20
Identities = 54/141 (38%), Positives = 77/141 (54%)
Frame = +2
Query: 98 LLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGD 277
L+ +I L + T +Q A IP+ L G D+ Y LPIL+R+L + +
Sbjct: 12 LISSIEHLGFEQATEVQEAAIPLILGGCDIMATSQTGSGKTIAYGLPILQRMLKQRRFEH 71
Query: 278 RVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPDIVIATP 457
R R +IL PTREL QVH + L + L +G ++QE +LR+NP+++IATP
Sbjct: 72 RAVRAVILAPTRELAIQVHANMKHLGMSLDYQIQLIIGRESFQHQEKLLRKNPEVLIATP 131
Query: 458 GRLIDHIRNTPSFGLHAIEVL 520
GRL+DHIR S L +E L
Sbjct: 132 GRLLDHIRE-KSISLEHLEFL 151
>UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 99.5 bits (237), Expect = 4e-20
Identities = 50/141 (35%), Positives = 82/141 (58%), Gaps = 3/141 (2%)
Frame = +2
Query: 107 AIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE---RLLYKAKGGD 277
AI +NY H T IQA +IP +LG DV +++P +E RL + + G
Sbjct: 100 AIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIELLCRLRFSPRNG- 158
Query: 278 RVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPDIVIATP 457
T V++L PTREL Q H V ++L ++ + T+G +GG+D++ + L + ++++ATP
Sbjct: 159 --TGVIVLCPTRELAIQTHNVAKELMRYHSQTLGYVIGGIDLRGEAEQLAKGINVLVATP 216
Query: 458 GRLIDHIRNTPSFGLHAIEVL 520
GRL+DH++ T SF ++ L
Sbjct: 217 GRLLDHMQKTKSFKYECLKCL 237
>UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=1;
Reinekea sp. MED297|Rep: Probable ATP-dependent RNA
helicase - Reinekea sp. MED297
Length = 448
Score = 99.1 bits (236), Expect = 5e-20
Identities = 61/150 (40%), Positives = 83/150 (55%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F +L L AI + PT +Q A+IP AL GKD+ Y+LP L R
Sbjct: 2 FASFDLHPKLTAAIEQHGWTEPTDVQTASIPQALDGKDLLISAETGSGKTAAYLLPALHR 61
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
+L + K + RVL++VPTREL QV L+Q T + + GG + +YQ S+LRR
Sbjct: 62 VLSERKPKAGI-RVLVMVPTRELAQQVMKDCEALTQQTGLKTVIIRGGQEFQYQASLLRR 120
Query: 431 NPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
NP+IVIATPGR+ +H+ N S L +E L
Sbjct: 121 NPEIVIATPGRMTEHL-NKNSTDLLDVECL 149
>UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_47_37459_39102 - Giardia lamblia
ATCC 50803
Length = 547
Score = 98.7 bits (235), Expect = 7e-20
Identities = 55/143 (38%), Positives = 84/143 (58%), Gaps = 1/143 (0%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F +LS LL+A+ A+ + + T IQ A+IPV L G+++ ++LP ++
Sbjct: 31 FSETSLSPFLLEAVDAMGHKNMTRIQEASIPVILSGRNMTAKAHTGSGKSLAFLLPAID- 89
Query: 251 LLYKAKGG-DRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
L++KA T V++L PTREL Q++ V QL T +TVGL++GG + + + L
Sbjct: 90 LIHKANMKLHHGTGVIVLTPTRELALQLYNVATQLISATNITVGLAIGGTSRQKEANHLC 149
Query: 428 RNPDIVIATPGRLIDHIRNTPSF 496
+ +VIATPGRL DH+ NTP F
Sbjct: 150 KGASVVIATPGRLCDHLNNTPGF 172
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 98.3 bits (234), Expect = 9e-20
Identities = 61/157 (38%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Frame = +2
Query: 62 NASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPI 241
N +F L + KAI A Y PTPIQA IPV + G DV + LPI
Sbjct: 19 NVTFADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPI 78
Query: 242 LERLLYKAKGGD----RVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKY 409
L RL+ A R LIL PTREL QV ++FT + + GG+D+
Sbjct: 79 LNRLMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDINP 138
Query: 410 QESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
Q LRR ++VIATPGRL+DH++ S L ++VL
Sbjct: 139 QIQTLRRGVELVIATPGRLLDHVQQ-KSINLGQVQVL 174
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 97.9 bits (233), Expect = 1e-19
Identities = 60/155 (38%), Positives = 86/155 (55%), Gaps = 1/155 (0%)
Frame = +2
Query: 53 YDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYM 232
Y ++ F M LS P+LK I Y PTPIQ TIP+AL G+D+ ++
Sbjct: 32 YKKSGGFQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFL 91
Query: 233 LPILERL-LYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKY 409
+P+ E+L + +AK G R LIL PTREL Q ++L +FT + + +GG +++
Sbjct: 92 IPLFEKLKIRQAKVG---ARALILSPTRELALQTLKFIKELGRFTGLKATIILGGDNMEN 148
Query: 410 QESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIE 514
Q S + NPDI+IATPGR + HI L+ IE
Sbjct: 149 QFSAIHGNPDILIATPGRFL-HICIEMDLQLNNIE 182
>UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containing
protein; n=1; Babesia bovis|Rep: DEAD/DEAH box helicase
domain containing protein - Babesia bovis
Length = 649
Score = 97.9 bits (233), Expect = 1e-19
Identities = 64/159 (40%), Positives = 90/159 (56%), Gaps = 12/159 (7%)
Frame = +2
Query: 80 MNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLL- 256
+ LSR L+KA+ + Y P+ IQ+ IPVAL GKD+ +++P L+RL+
Sbjct: 130 LGLSRSLIKAVFDMGYKAPSIIQSKVIPVALEGKDLLATAETGSGKSAAFLIPTLQRLIT 189
Query: 257 ---YKAK-------GGDRV-TRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDV 403
K K G RV T+ LIL+PTREL AQ + V L+Q T L GG+ V
Sbjct: 190 AGVIKQKDVDLTRGGNQRVGTKALILLPTRELAAQCYDVFLALTQNLTQNGVLITGGVPV 249
Query: 404 KYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
K QE+ LRR P IV ATPG+++D + N+ + AIE++
Sbjct: 250 KEQEAKLRRMPYIVFATPGKVLDIMLNSNCIHMDAIEIV 288
>UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 642
Score = 96.7 bits (230), Expect = 3e-19
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
Frame = +2
Query: 62 NASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPI 241
N F + + +P A+ + + + T IQ+ TIP L G+DV +++P
Sbjct: 150 NDLFDDLEVCKPTKDALKQMKFTNMTHIQSRTIPHLLKGRDVLGAAKTGSGKTLAFLIPA 209
Query: 242 LERLLYKAKGGDRV-TRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
+E +LYK + T ++++ PTREL Q++ V +QL F + T+GL +GG + K +
Sbjct: 210 IE-MLYKTNFVQSMGTGIIVITPTRELATQIYDVAKQLMFFHSKTLGLLIGGANRKAEAI 268
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSFGLH 505
L+ +++IATPGRL+DH++NT F H
Sbjct: 269 KLKTGVNMIIATPGRLLDHLQNTAGFAYH 297
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 96.7 bits (230), Expect = 3e-19
Identities = 54/134 (40%), Positives = 74/134 (55%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + LS P+++AI L Y HPTPIQA IP L G DV + LP+L++
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQK 352
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
L ++ R+ R LIL PTREL QV + ++ +T L +GG + Q VL R
Sbjct: 353 LA-GSRARARMPRSLILEPTRELALQVAENFKLYGKYLRLTHALLIGGESMAEQRDVLNR 411
Query: 431 NPDIVIATPGRLID 472
D++IATPGRL+D
Sbjct: 412 GVDVLIATPGRLLD 425
>UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=1;
uncultured gamma proteobacterium|Rep: Probable
ATP-dependent RNA helicase - uncultured gamma
proteobacterium
Length = 505
Score = 96.7 bits (230), Expect = 3e-19
Identities = 50/137 (36%), Positives = 75/137 (54%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F ++L R L + AL T +Q +P AL G+D+ Y++P+ ++
Sbjct: 60 FEELDLDRQLRLGLDALELGDATEVQKLAVPAALAGRDLLVSAETGSGKTLAYLIPLAQK 119
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
+L G + T+ LILVPTREL QV RQL + + GG D KYQ+S LR+
Sbjct: 120 ILAAPAGTTQGTQALILVPTRELARQVLKHIRQLLAKSPLKAQAITGGADFKYQKSQLRQ 179
Query: 431 NPDIVIATPGRLIDHIR 481
+P+I++ TPGRL++H R
Sbjct: 180 DPEIIVGTPGRLLEHCR 196
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 95.9 bits (228), Expect = 5e-19
Identities = 53/137 (38%), Positives = 73/137 (53%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF ++LS L A+ + HPTPIQA IP AL GKDV ++LP+++
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLID 64
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
RL G TR L+L PTREL Q+ + V + +GG+ + Q LR
Sbjct: 65 RL-----AGKPGTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALR 119
Query: 428 RNPDIVIATPGRLIDHI 478
+ +IVIATPGRL+DH+
Sbjct: 120 QKREIVIATPGRLVDHL 136
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 95.5 bits (227), Expect = 7e-19
Identities = 58/160 (36%), Positives = 82/160 (51%)
Frame = +2
Query: 41 EPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXX 220
E PP D +F + L+ L A+ + Y PTPIQA +P L G+DV
Sbjct: 127 EIPPQD--TAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKT 184
Query: 221 XXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLD 400
+ LPIL +L +R R L+L PTREL QV ++ S++T +T + GG+
Sbjct: 185 AAFALPILHKL----GAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVG 240
Query: 401 VKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
Q L+R D+V ATPGRL+DHI + L +E+L
Sbjct: 241 YGKQREDLQRGVDVVAATPGRLLDHIEQ-GTMTLADVEIL 279
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 95.1 bits (226), Expect = 9e-19
Identities = 56/151 (37%), Positives = 77/151 (50%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF +L LL++I +L Y PTPIQAA IP AL GKD+ + +PIL+
Sbjct: 99 SFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQ 158
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
L A + L+L PTREL Q+ L + +GG+ + Q L
Sbjct: 159 TLYTAA----QPYYALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLM 214
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
R P ++IATPGRLIDH+ +T F L ++ L
Sbjct: 215 RKPHVIIATPGRLIDHLEHTKGFSLKKLQYL 245
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 94.7 bits (225), Expect = 1e-18
Identities = 51/135 (37%), Positives = 76/135 (56%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + LS L+A+ Y TPIQAA IPVAL G+DV + LP++++
Sbjct: 4 FSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLIDK 63
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
L+ + R+ R L++ PTREL QV + + ++ T ++ L +GG+ QE L R
Sbjct: 64 LM-NGRAKARMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQEKKLDR 122
Query: 431 NPDIVIATPGRLIDH 475
D++IATPGRL+DH
Sbjct: 123 GVDVLIATPGRLLDH 137
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 94.7 bits (225), Expect = 1e-18
Identities = 57/151 (37%), Positives = 75/151 (49%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF +NL L++A LNY PTPIQ+ IP AL G D+ + +PIL
Sbjct: 82 SFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILN 141
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
RL + + IL PTREL Q+ L V VGG+++ Q L
Sbjct: 142 RLWHDQEP----YYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLM 197
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
R P I+IATPGRL+DH+ NT F L ++ L
Sbjct: 198 RKPHIIIATPGRLMDHLENTKGFSLRKLKFL 228
>UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;
n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 27 - Arabidopsis thaliana (Mouse-ear cress)
Length = 633
Score = 94.7 bits (225), Expect = 1e-18
Identities = 51/146 (34%), Positives = 83/146 (56%), Gaps = 1/146 (0%)
Frame = +2
Query: 62 NASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPI 241
N +F ++LS K+I + + T IQA IP ++G+DV +++P
Sbjct: 153 NKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPA 212
Query: 242 LERLLYKAKGGDRV-TRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
+E LLY+ K R T VL++ PTREL Q + V ++L ++ + TVG +GG K +
Sbjct: 213 VE-LLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAE 271
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSF 496
+L + ++++ATPGRL+DH+ NT F
Sbjct: 272 ILAKGVNLLVATPGRLLDHLENTNGF 297
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 94.3 bits (224), Expect = 2e-18
Identities = 57/151 (37%), Positives = 80/151 (52%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + LS ++KA+ Y PTPIQ+ TIP L KDV ++LP+L
Sbjct: 7 NFDNLGLSAKVIKAVQLAGYTAPTPIQSETIPHVLQHKDVLGIAQTGTGKTASFVLPMLT 66
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
LL K + R+ R LIL PTREL AQV + + V L +GG+ +Q+ L
Sbjct: 67 -LLEKGRAKARMPRTLILEPTRELAAQVKENFDKYGINHRLNVALLIGGVSFDHQDRKLE 125
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
R D++IATPGRL+DH + L +E+L
Sbjct: 126 RGADVLIATPGRLLDHFER-GTLLLMGVEIL 155
>UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 449
Score = 94.3 bits (224), Expect = 2e-18
Identities = 51/154 (33%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
D+ SF + L++P+++A+ N+ +PT +QA TIP L G+D+ +++
Sbjct: 4 DKIISFLDLKLAKPIIRALNENNFTNPTKVQAETIPKILSGQDICATAITGSGKSMAFLI 63
Query: 236 PILERLL-YKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQ 412
PI+++LL ++ G + LI+ PTREL Q+ V L+ +T L +GG+ + Q
Sbjct: 64 PIVQKLLTFRGLPGPKA---LIMSPTRELAQQLKAVCDMLAAHCAITSTLVIGGVSDEEQ 120
Query: 413 ESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIE 514
+L PDI+I TPGR ID I N L ++
Sbjct: 121 RELLTPAPDIIIGTPGRFIDSIFNAKVLKLEHLQ 154
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 94.3 bits (224), Expect = 2e-18
Identities = 60/173 (34%), Positives = 84/173 (48%)
Frame = +2
Query: 2 HEATIEYDSDFFEEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGK 181
H++ E EE +E +F + ++ L +A L + PT IQ IP+AL G+
Sbjct: 7 HDSPTEASQPIVEE----EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGR 62
Query: 182 DVXXXXXXXXXXXXXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQF 361
D+ + LPIL LL + R+ L+L PTREL Q+ L
Sbjct: 63 DIIGLAETGSGKTGAFALPILNALLETPQ---RLF-ALVLTPTRELAFQISEQFEALGSS 118
Query: 362 TTVTVGLSVGGLDVKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
V + VGG+D Q L + P I+IATPGRLIDH+ NT F L A++ L
Sbjct: 119 IGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYL 171
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 93.9 bits (223), Expect = 2e-18
Identities = 49/135 (36%), Positives = 80/135 (59%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + LS+ LL+A+ L Y PTP+QAA IP L+ +D+ ++LP+++
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMID 61
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
+L + R+ R LIL PTREL AQV + ++ +++ L +GG+ + Q++ L
Sbjct: 62 -ILAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALE 120
Query: 428 RNPDIVIATPGRLID 472
+ D++IATPGRL+D
Sbjct: 121 KGVDVLIATPGRLLD 135
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 93.9 bits (223), Expect = 2e-18
Identities = 54/150 (36%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
Frame = +2
Query: 23 DSDFFEEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXX 202
D D + + F M LS P+LKAI + Y PTPIQ TIP+ L G+DV
Sbjct: 24 DDDVSGKKGKKKKGGGFQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEGRDVVAMAK 83
Query: 203 XXXXXXXXYMLPILERLLYKA-KGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVG 379
+++P+ E+L + K G R L+L PTREL Q +QL +FT +
Sbjct: 84 TGSGKTGCFLIPLFEKLKQREIKSG---ARALVLTPTRELAIQTFKFIKQLGKFTDLKTI 140
Query: 380 LSVGGLDVKYQESVLRRNPDIVIATPGRLI 469
L +GG + Q + + PDI++ATPGR +
Sbjct: 141 LVLGGDSMDSQFAAIHTLPDIIVATPGRFL 170
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 93.5 bits (222), Expect = 3e-18
Identities = 53/153 (34%), Positives = 81/153 (52%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
+++ F M LS+ +++ I Y PTPIQ TIP+AL G+DV +++
Sbjct: 35 NKSGGFQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLI 94
Query: 236 PILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQE 415
P+ E+L K + R LIL PTREL Q +++ +FT + + +GG + Q
Sbjct: 95 PMFEKL--KTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVILGGDSMDNQF 152
Query: 416 SVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIE 514
S + NPDI++ATPGR + HI L +IE
Sbjct: 153 SAIHGNPDIIVATPGRFL-HICIEMDMNLKSIE 184
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 93.5 bits (222), Expect = 3e-18
Identities = 56/151 (37%), Positives = 75/151 (49%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + LS P+LKAI Y P+ IQA IP L G+DV + LP+LE
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLE 65
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
L R L+L PTREL AQV + Q ++ + GG+ + Q LR
Sbjct: 66 ILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALR 125
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
R DI+IATPGR++D + N + +EVL
Sbjct: 126 RGADILIATPGRMMD-LYNQKAVRFDKLEVL 155
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 93.5 bits (222), Expect = 3e-18
Identities = 55/151 (36%), Positives = 77/151 (50%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + L LL+A+ + PT IQAA IP AL G+DV Y+LP L+
Sbjct: 5 TFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQ 64
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
LL + R+LIL PTREL QV R+L++ T + + GG+ V
Sbjct: 65 HLLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEVFS 124
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
N DIV+AT GRL+ +I+ +F A+E L
Sbjct: 125 ENQDIVVATTGRLLQYIKE-ENFDCRAVETL 154
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 93.5 bits (222), Expect = 3e-18
Identities = 50/152 (32%), Positives = 75/152 (49%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
++ F M L + + + Y PTPIQ +P+ L G D+ +++P
Sbjct: 47 KSGGFESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVP 106
Query: 239 ILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
+++RL G R LIL PTR+L Q +QL +FT + + L VGG ++ Q
Sbjct: 107 MIQRLRRHDAGAG--IRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFE 164
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSFGLHAIE 514
L NPDI+IATPGRL+ H+ L +E
Sbjct: 165 ELAENPDIIIATPGRLVHHLAEVEDLNLRTVE 196
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 93.5 bits (222), Expect = 3e-18
Identities = 56/154 (36%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
Frame = +2
Query: 62 NASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPI 241
+ SF + LS+ +LK I + PTPIQ TIP+ L GKDV ++LP+
Sbjct: 101 SGSFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPM 160
Query: 242 LERL-LYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
LE+L ++ AK G R +IL P+REL Q V + S T + + + VGG ++ Q
Sbjct: 161 LEKLKVHSAKVG---ARAVILSPSRELALQTLKVVKDFSAGTDLRLAMLVGGDSLEEQFK 217
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
++ NPDI+IATPGR + H++ L ++E +
Sbjct: 218 MMMSNPDIIIATPGRFL-HLKVEMELSLASVEYI 250
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 93.1 bits (221), Expect = 4e-18
Identities = 56/155 (36%), Positives = 78/155 (50%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
+E +F + ++ L +A L + PT IQ IP+AL G+D+ + L
Sbjct: 10 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 69
Query: 236 PILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQE 415
PIL LL + R+ L+L PTREL Q+ L V + VGG+D Q
Sbjct: 70 PILNALLETPQ---RLF-ALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQS 125
Query: 416 SVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
L + P I+IATPGRLIDH+ NT F L A++ L
Sbjct: 126 LALAKKPHIIIATPGRLIDHLENTKGFNLRALKYL 160
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 92.7 bits (220), Expect = 5e-18
Identities = 54/136 (39%), Positives = 72/136 (52%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + LS +L A+ A Y PTPIQ IP L KDV ++LP+L
Sbjct: 2 SFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLARKDVLGIAQTGTGKTAAFVLPMLT 61
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
+L K + R+ R LIL PTREL AQV + + V L +GG+ Q++ L
Sbjct: 62 -ILEKGRARARMPRTLILEPTRELAAQVKENFDRYGAGQKLNVALLIGGVSFGDQDAKLT 120
Query: 428 RNPDIVIATPGRLIDH 475
R D++IATPGRL+DH
Sbjct: 121 RGVDVLIATPGRLLDH 136
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 92.7 bits (220), Expect = 5e-18
Identities = 57/154 (37%), Positives = 81/154 (52%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
+ F MNL P+ KAI + PTPIQ IP+ L G+DV +++P
Sbjct: 297 KGGGFESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGKTAAFIIP 356
Query: 239 ILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
++ +L ++ R LI+VPTREL Q+ +V + +FT +T L VGG ++ Q
Sbjct: 357 LINKLQNHSRIVG--ARALIVVPTRELALQIASVLKTFIKFTDLTYTLIVGGHGLEGQFE 414
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
L NPDI+IATPGRL I T L+ +E L
Sbjct: 415 SLASNPDIIIATPGRLSQLIDET-DLSLNKVEFL 447
>UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog;
n=39; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase srmB homolog - Haemophilus influenzae
Length = 439
Score = 92.7 bits (220), Expect = 5e-18
Identities = 52/152 (34%), Positives = 77/152 (50%)
Frame = +2
Query: 65 ASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPIL 244
+ F +LS LLKA+ Y PT IQ IP A+ DV ++LP L
Sbjct: 4 SQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPAL 63
Query: 245 ERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVL 424
+ LL + R+L+L PTREL QV +L+QFT + + GG+ + V
Sbjct: 64 QHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHGDVF 123
Query: 425 RRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
N D+V+ATPGRL+ +I+ +F ++E+L
Sbjct: 124 NTNQDLVVATPGRLLQYIKE-ENFDCRSVEML 154
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 92.7 bits (220), Expect = 5e-18
Identities = 53/152 (34%), Positives = 77/152 (50%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
++ F +NL + AI Y PTPIQ T+P+ L G DV +++P
Sbjct: 26 KSGGFESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIP 85
Query: 239 ILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
+LE+L G R LIL PTR+L Q T++L +FT + V L VGG ++ Q
Sbjct: 86 MLEKLKQHVPQGG--VRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFE 143
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSFGLHAIE 514
L + PD++IATPGRL+ + L +E
Sbjct: 144 ELTKGPDVIIATPGRLMHLLSEVDDMTLRTVE 175
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 92.3 bits (219), Expect = 6e-18
Identities = 57/170 (33%), Positives = 87/170 (51%)
Frame = +2
Query: 11 TIEYDSDFFEEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVX 190
T+E D D ++ P +++ + + L +A L + PT IQ IP+AL GKD+
Sbjct: 29 TVEEDDDKDDDTPTFED------LGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDII 82
Query: 191 XXXXXXXXXXXXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTV 370
+ +PIL++LL K + R+ LIL PTREL Q+ L +
Sbjct: 83 GLAETGSGKTAAFTIPILQKLLEKPQ---RLFS-LILAPTRELSLQIKEQLISLGSEIGL 138
Query: 371 TVGLSVGGLDVKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
V L +GGLD+ Q L + P I++ +PGR+ DH++NT F L I+ L
Sbjct: 139 DVCLILGGLDMVSQALQLSKKPHIIVGSPGRIADHLQNTKGFSLETIKYL 188
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 91.9 bits (218), Expect = 8e-18
Identities = 55/150 (36%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + L++PLLKA+ Y PTPIQA IP+ + G+D+ + LPIL R
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 251 LLYKAKGGDRVT-RVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
L K R R L+L PTREL Q+ R + +TV GG+ Q L
Sbjct: 127 LAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKALA 186
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEV 517
D+V+ATPGRL+DH+ S L+ +E+
Sbjct: 187 AGVDVVVATPGRLMDHL-GEKSAHLNGVEI 215
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 91.5 bits (217), Expect = 1e-17
Identities = 51/136 (37%), Positives = 75/136 (55%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F ++L+ + KAI Y PTPIQA IP AL G+DV + LP++
Sbjct: 12 TFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPMIT 71
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
+L + + R+ R L+L PTREL AQV ++ +T L +GG+ K QE +
Sbjct: 72 -MLARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQAID 130
Query: 428 RNPDIVIATPGRLIDH 475
+ D++IATPGRL+DH
Sbjct: 131 KGVDVLIATPGRLLDH 146
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 91.5 bits (217), Expect = 1e-17
Identities = 51/138 (36%), Positives = 74/138 (53%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + L PL++A+ AL Y PTPIQ A +P L GKD+ + LP+L+
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLPLLQ 96
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
R+ A + L+LVPTREL QV + Q ++V GG + Q VL+
Sbjct: 97 RITPGAHAPFTAS-ALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQLRVLK 155
Query: 428 RNPDIVIATPGRLIDHIR 481
R D+V+ATPGR +DH++
Sbjct: 156 RGVDVVVATPGRALDHLQ 173
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 91.1 bits (216), Expect = 1e-17
Identities = 47/137 (34%), Positives = 74/137 (54%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + + +PLL AI L Y PT IQ IP+ L DV + L +L+
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQ 61
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
RL + R R L++ PTREL Q++ + ++ + + + VGG D++ Q+ +L+
Sbjct: 62 RLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQKILK 121
Query: 428 RNPDIVIATPGRLIDHI 478
DIVIATPGR+++H+
Sbjct: 122 EGVDIVIATPGRVLEHV 138
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 91.1 bits (216), Expect = 1e-17
Identities = 58/154 (37%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + LS P+ KA+ Y P+PIQA IP L GKDV + LP+LE
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 248 RLLY--KAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESV 421
L KAK G R L+L PTREL AQV ++ + + GG+ + Q
Sbjct: 62 LLSKGNKAKAGQ--IRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQK 119
Query: 422 LRRNPDIVIATPGRLIDHI-RNTPSFGLHAIEVL 520
LR D+++ATPGRL+D + +N F I VL
Sbjct: 120 LRHGVDVLVATPGRLLDLVQQNVVKFNQLEILVL 153
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 91.1 bits (216), Expect = 1e-17
Identities = 51/137 (37%), Positives = 74/137 (54%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+FY M L LL+ I + PTPIQ +IP+A+ G D+ + +PIL
Sbjct: 5 NFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILN 64
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
R++ K +G + L+L PTREL QV LS+ + V GG ++ Q LR
Sbjct: 65 RVI-KGEG----LQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLR 119
Query: 428 RNPDIVIATPGRLIDHI 478
RNP+I++ TPGRL+DH+
Sbjct: 120 RNPEIIVGTPGRLMDHM 136
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 91.1 bits (216), Expect = 1e-17
Identities = 56/153 (36%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + LS P+ KA+ Y P+PIQA IP L GKDV + LP+LE
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 248 RLLY--KAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESV 421
L KAK G R L+L PTREL AQV ++ + + GG+ + Q
Sbjct: 62 LLSKGNKAKAGQ--IRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQK 119
Query: 422 LRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
LR D+++ATPGRL+D + + + +EVL
Sbjct: 120 LRHGVDVLVATPGRLLD-LEQQKAVKFNQLEVL 151
>UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 454
Score = 91.1 bits (216), Expect = 1e-17
Identities = 49/130 (37%), Positives = 72/130 (55%)
Frame = +2
Query: 131 HPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDRVTRVLILVPT 310
HPTPIQ A IP AL G+DV + +P+L LL + R+ V +L P+
Sbjct: 54 HPTPIQMAAIPHALNGRDVIGLAVTGSGKTGAFTIPVLHHLLEDVQ---RIYCV-VLAPS 109
Query: 311 RELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPDIVIATPGRLIDHIRNTP 490
REL Q+ R LS + V + +GG+D+ +Q S L + P +++A+PGRL DH+ NT
Sbjct: 110 RELCEQIAEQFRALSSSIALQVCVIIGGVDMVHQASALAKRPHVIVASPGRLADHVENTK 169
Query: 491 SFGLHAIEVL 520
F L ++ L
Sbjct: 170 GFSLSTVKKL 179
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 90.6 bits (215), Expect = 2e-17
Identities = 50/145 (34%), Positives = 71/145 (48%)
Frame = +2
Query: 44 PPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXX 223
P Y + F MNLS P+ A+ Y +PTP+QA A+ GKD+
Sbjct: 22 PAEYIADIGFDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTA 81
Query: 224 XYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDV 403
+ LP+LE++ +R R LIL PTREL QV + L++ + + GG +
Sbjct: 82 AFGLPLLEKI----PADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASM 137
Query: 404 KYQESVLRRNPDIVIATPGRLIDHI 478
K QE L I++ TPGR+ DHI
Sbjct: 138 KQQEDALEEGTPIIVGTPGRVFDHI 162
>UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05414 protein - Schistosoma
japonicum (Blood fluke)
Length = 325
Score = 90.6 bits (215), Expect = 2e-17
Identities = 48/153 (31%), Positives = 80/153 (52%)
Frame = +2
Query: 62 NASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPI 241
+ F + +S P+ +AI + + H T IQ IP L +D+ +++P+
Sbjct: 49 SGKFEDLPISEPVKRAIKDMGFTHMTDIQNKCIPQLLEHRDIMACAKTGSGKTLAFLIPV 108
Query: 242 LERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESV 421
+E +L T +I+ PTREL Q + V +L QFT + +GL +GG + + +
Sbjct: 109 VELMLSLGLQPRNGTGAIIISPTRELSLQTYGVLTELIQFTNLRIGLIMGGSNRQTEAQN 168
Query: 422 LRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
L + I++ATPGRL+DH+ NT F H ++ L
Sbjct: 169 LEKGVTILVATPGRLLDHLTNTKFFLRHNLKAL 201
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 90.2 bits (214), Expect = 2e-17
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 3/142 (2%)
Frame = +2
Query: 80 MNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE---R 250
+NLS + KA+ Y T IQA +IP+ L+GKD+ +++PI+E +
Sbjct: 86 LNLSEEIQKALEEAGYTKMTTIQARSIPLLLMGKDIMAKARTGSGKTLAFLIPIVEILNK 145
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
+ ++ + G T +I+ PTREL Q V ++ + T L +GG K +E L++
Sbjct: 146 IHFQTRNG---TGAIIISPTRELAIQTFDVLEKILAHSERTRTLIIGGSSKKKEEEALKK 202
Query: 431 NPDIVIATPGRLIDHIRNTPSF 496
IV+ATPGRL+DHI NT F
Sbjct: 203 GASIVVATPGRLLDHIINTKCF 224
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 90.2 bits (214), Expect = 2e-17
Identities = 47/132 (35%), Positives = 73/132 (55%)
Frame = +2
Query: 83 NLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLYK 262
NLS L+ A+ +N PT IQ +IPVA+ G D+ Y+LP+++ + K
Sbjct: 9 NLSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLIDSFI-K 67
Query: 263 AKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPDI 442
K T LILVPTREL Q+H+ +++ + + +GG + Q L++NP +
Sbjct: 68 NK-----TTALILVPTRELATQIHSTLNKVTTSYKINSAVLIGGEPMPKQFIQLKKNPKV 122
Query: 443 VIATPGRLIDHI 478
+I TPGR+IDH+
Sbjct: 123 IIGTPGRIIDHL 134
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 90.2 bits (214), Expect = 2e-17
Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SFY M L L +A+ ++ PTP+QA IP+AL GKD+ + +P++
Sbjct: 3 SFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLIA 62
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQV-HTVTRQLSQFTTVTVGLSVGGLDVKYQESVL 424
+LL G + L++VPTREL QV + + + L + + + + L +GG + Q + L
Sbjct: 63 KLL----GEPNASTALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGGEPIFRQLNQL 118
Query: 425 RRNPDIVIATPGRLIDHI 478
+R P IVI TPGR+IDHI
Sbjct: 119 QRRPRIVIGTPGRIIDHI 136
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 90.2 bits (214), Expect = 2e-17
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + LS L++AI A Y PTP+Q IP L G+D+ + LPILE
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 248 RLL------YKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKY 409
RL + G R RVL+L PTREL AQVH + ++ GG+ +
Sbjct: 62 RLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLNFISACIFGGVGMNP 121
Query: 410 QESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
Q + + D+++A PGRL+D + S L +E+L
Sbjct: 122 QVQAMAKGVDVLVACPGRLLD-LAGQGSVDLSRVEIL 157
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 90.2 bits (214), Expect = 2e-17
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + + + K I + TPIQ +P+AL GKDV +++ I +
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
Query: 251 LLYKAK-GGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
LL +AK GG+ R LIL PTREL Q+ + L ++T + GG+D Q L+
Sbjct: 63 LLSQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDALK 122
Query: 428 RNPDIVIATPGRLIDHIR 481
DIVI TPGRLID+++
Sbjct: 123 AGADIVIGTPGRLIDYLK 140
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 90.2 bits (214), Expect = 2e-17
Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 4/147 (2%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
+ F M+L++ LLKAI + PTPIQ +IP+ L G D+ +++P
Sbjct: 228 KTGGFQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIP 287
Query: 239 ILERLLYKAKGGDRVT----RVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVK 406
++++L GD T R +IL PTREL Q V + SQ T + L VGG ++
Sbjct: 288 MIQKL------GDHSTTVGVRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSME 341
Query: 407 YQESVLRRNPDIVIATPGRLIDHIRNT 487
Q + L RNPDI+IATPGRL+ H+ T
Sbjct: 342 DQFTDLARNPDIIIATPGRLMHHLLET 368
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 90.2 bits (214), Expect = 2e-17
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 2/153 (1%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + LS +L+A+ Y PTPIQ IP L G+D+ + LP+L+
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 248 RLLYKAKG--GDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESV 421
L+ + G R R LIL PTREL AQ+ R S++ + + GG+ + Q
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query: 422 LRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
LR D+++ATPGRL+D + + + L +E+L
Sbjct: 122 LRGGVDVLVATPGRLLD-LEHQNAVKLDQVEIL 153
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 90.2 bits (214), Expect = 2e-17
Identities = 55/150 (36%), Positives = 82/150 (54%)
Frame = +2
Query: 65 ASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPIL 244
++F M L++ LL+AI + PTPIQ TIP+ L G+DV +++P++
Sbjct: 69 SNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMI 128
Query: 245 ERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVL 424
E L K+ + TR LIL P REL Q V + S+ T + VGG+ ++ Q S+L
Sbjct: 129 EHL--KSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLL 186
Query: 425 RRNPDIVIATPGRLIDHIRNTPSFGLHAIE 514
PDIV+ATPGR + H++ L +IE
Sbjct: 187 SGKPDIVVATPGRFL-HLKVEMKLELSSIE 215
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 89.8 bits (213), Expect = 3e-17
Identities = 51/151 (33%), Positives = 77/151 (50%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + L L ++ L + PT IQ+ +P AL G+D+ + LPIL+
Sbjct: 52 TFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQ 111
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
RLL + + LIL PTREL Q+ + VTV VGGLD Q L
Sbjct: 112 RLLQRTQR----FYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALA 167
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+ P +V+ +PGR++DH++ T F L +++VL
Sbjct: 168 KKPHVVVGSPGRVVDHLQQTKGFSLKSVKVL 198
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 89.4 bits (212), Expect = 4e-17
Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Frame = +2
Query: 62 NASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPI 241
+ +F L+ PL +A+ L PTPIQ IP AL G+D+ + LP+
Sbjct: 3 STTFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPL 62
Query: 242 LERLL-YKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
L L+ K R T+ LIL PTREL Q+ LS+ T ++ + GG+ V+ Q
Sbjct: 63 LHHLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQ 122
Query: 419 VLRRNPDIVIATPGRLID 472
L R DI++ATPGRL+D
Sbjct: 123 ALARGVDILVATPGRLLD 140
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 89.0 bits (211), Expect = 6e-17
Identities = 48/141 (34%), Positives = 75/141 (53%)
Frame = +2
Query: 62 NASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPI 241
+ +F + + + L++ + +N V PTP+Q +IP L GKD+ + LPI
Sbjct: 6 SVNFADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPI 65
Query: 242 LERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESV 421
++ + K + G LILVPTREL QV Q ++ T + + GG + Q++
Sbjct: 66 IQAVQQKKRNG--TPHALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKNK 123
Query: 422 LRRNPDIVIATPGRLIDHIRN 484
L DI+IATPGRL+DH+ N
Sbjct: 124 LEEGADILIATPGRLLDHLFN 144
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 89.0 bits (211), Expect = 6e-17
Identities = 58/153 (37%), Positives = 79/153 (51%), Gaps = 2/153 (1%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + L LLKAI L + P+PIQ+ IP L G+DV + LP+L+
Sbjct: 6 SFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQ 65
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSV-GGLDVKYQESVL 424
R+ DR + L+L PTREL QV L++ LSV GG ++ Q S L
Sbjct: 66 RI----DAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASAL 121
Query: 425 RRNPDIVIATPGRLIDHI-RNTPSFGLHAIEVL 520
RR +V+ TPGR++DHI R T G+ + VL
Sbjct: 122 RRGAQVVVGTPGRILDHINRGTLQLGVVRMTVL 154
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 89.0 bits (211), Expect = 6e-17
Identities = 54/141 (38%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Frame = +2
Query: 65 ASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPIL 244
ASF + + PL + L Y PTPIQAATIP L G+DV + +P+L
Sbjct: 9 ASFAELGIIAPLCNRLTELTYAAPTPIQAATIPAVLSGRDVLAGANTGSGKTAAFAVPLL 68
Query: 245 ERLLYKAKGGDR---VTRVLILVPTRELGAQV-HTVTRQLSQFT-TVTVGLSVGGLDVKY 409
+R L++AK ++ R L+LVPTREL QV + S F + + + GG+ V
Sbjct: 69 QR-LFEAKTAEKSAGQVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 410 QESVLRRNPDIVIATPGRLID 472
Q LR D+++ATPGRL+D
Sbjct: 128 QMQSLRAGADVLVATPGRLLD 148
>UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP4 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 859
Score = 89.0 bits (211), Expect = 6e-17
Identities = 49/157 (31%), Positives = 83/157 (52%)
Frame = +2
Query: 50 PYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXY 229
P E F + +S K + + ++++PTPIQ+ IP AL +D+ +
Sbjct: 55 PPSEITLFSELPMSSKTQKGLKSSHFLNPTPIQSLAIPPALQARDILGSAKTGSGKTLAF 114
Query: 230 MLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKY 409
++P+LERL + G +++ PTREL Q R + ++ + GL +GG +K
Sbjct: 115 LIPLLERLYLEKWGPMDGLGAVVISPTRELAVQTFMQLRDIGKYHNFSAGLVIGGKPLKE 174
Query: 410 QESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
++ L R +I+IATPGRL+ H+ +T F A++VL
Sbjct: 175 EQERLGR-MNILIATPGRLLQHLDSTVGFDSSAVKVL 210
>UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
RE48840p - Nasonia vitripennis
Length = 1378
Score = 88.6 bits (210), Expect = 8e-17
Identities = 50/133 (37%), Positives = 75/133 (56%), Gaps = 1/133 (0%)
Frame = +2
Query: 101 LKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDR 280
LKAI + + T IQA +IP L G+D+ +++P +E L+YK K R
Sbjct: 219 LKAIAEMGFTDMTEIQAMSIPPLLEGRDLVGAAKTGSGKTLSFLIPAVE-LIYKLKFMPR 277
Query: 281 V-TRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPDIVIATP 457
T +I+ PTREL Q V ++L ++ T GL +GG + + L + +IV+ATP
Sbjct: 278 NGTGCIIISPTRELSMQTFGVLKELMKYHYHTYGLLMGGASRQTEAQKLSKGVNIVVATP 337
Query: 458 GRLIDHIRNTPSF 496
GRL+DH++NTP F
Sbjct: 338 GRLLDHLQNTPDF 350
>UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to RE48840p -
Nasonia vitripennis
Length = 1134
Score = 88.6 bits (210), Expect = 8e-17
Identities = 50/133 (37%), Positives = 75/133 (56%), Gaps = 1/133 (0%)
Frame = +2
Query: 101 LKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDR 280
LKAI + + T IQA +IP L G+D+ +++P +E L+YK K R
Sbjct: 644 LKAIAEMGFTDMTEIQAMSIPPLLEGRDLVGAAKTGSGKTLSFLIPAVE-LIYKLKFMPR 702
Query: 281 V-TRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPDIVIATP 457
T +I+ PTREL Q V ++L ++ T GL +GG + + L + +IV+ATP
Sbjct: 703 NGTGCIIISPTRELSMQTFGVLKELMKYHYHTYGLLMGGASRQTEAQKLSKGVNIVVATP 762
Query: 458 GRLIDHIRNTPSF 496
GRL+DH++NTP F
Sbjct: 763 GRLLDHLQNTPDF 775
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 88.6 bits (210), Expect = 8e-17
Identities = 53/126 (42%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Frame = +2
Query: 101 LKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDR 280
L+AIG Y PT IQ+ IP LLG+DV + LP+L++L G R
Sbjct: 17 LRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLANAPTGTPR 76
Query: 281 VTRVLILVPTRELGAQVHTVTRQLSQF--TTVTVGLSVGGLDVKYQESVLRRNPDIVIAT 454
TR LILVPTREL AQV +++ V V + GG+ + Q LR DIV+AT
Sbjct: 77 PTRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSINPQMMNLRGGADIVVAT 136
Query: 455 PGRLID 472
PGRL+D
Sbjct: 137 PGRLLD 142
>UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 416
Score = 88.6 bits (210), Expect = 8e-17
Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 1/156 (0%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
D++ +F + L +P++ A +L + +P PIQ TIP A+ KD+ YML
Sbjct: 3 DDSYTFSDLGLCQPMVDACKSLGWKYPMPIQIKTIPPAIEKKDICGTAETGSGKTGAYML 62
Query: 236 PILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQE 415
PI + L+ PTREL Q+ VTR + + V V +GG+D Q
Sbjct: 63 PIFHHMWENPHS----FFALVFAPTRELATQIDHVTRDIGKDIKVRVCTIIGGVDEDSQV 118
Query: 416 SVLRRNPDIVIATPGRLIDHIRNTPS-FGLHAIEVL 520
L+ P +V+ATPGRL IRN P L+ +E L
Sbjct: 119 KALKAQPHVVVATPGRLARLIRNNPKVIPLNKVECL 154
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 88.6 bits (210), Expect = 8e-17
Identities = 52/151 (34%), Positives = 81/151 (53%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
++ F M L+ LL+AI + PTPIQ TIP+ L +DV +++P
Sbjct: 84 KSGGFQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIP 143
Query: 239 ILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
++ERL KA R +I+ P+REL Q V ++L + T + L VGG ++ Q
Sbjct: 144 MIERL--KAHSARVGARAIIMSPSRELALQTLKVVKELGKGTDLKTVLLVGGDSLEEQFG 201
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSFGLHAI 511
++ NPDI+IATPGR + H++ S L ++
Sbjct: 202 LMAANPDIIIATPGRFL-HLKVEMSLNLSSV 231
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 88.2 bits (209), Expect = 1e-16
Identities = 58/151 (38%), Positives = 77/151 (50%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F ++L LL AI +Y PTPIQA IP LL KDV ++LP L+
Sbjct: 2 TFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPALQ 61
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
LL + R RVLIL PTREL Q+H V +QL + GG Q +L+
Sbjct: 62 FLLDDPRPS-RKPRVLILAPTRELAFQIHKVVKQLGAHCPFESNVVTGGFASDKQLEILQ 120
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
DI++ATPGRL+ +I + L IE+L
Sbjct: 121 SKIDILVATPGRLL-NIMSKEFIDLSDIELL 150
>UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP4 -
Ustilago maydis (Smut fungus)
Length = 869
Score = 88.2 bits (209), Expect = 1e-16
Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + LS + + Y T IQA ++ ++L GKDV +++P+LE
Sbjct: 60 FTQLPLSDRTCRGLKRAGYTDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIPVLE- 118
Query: 251 LLYKAKGGDRV-TRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
+LY+ K G L++ PTREL Q+ V R++ + T + GL +GG DVK ++ L
Sbjct: 119 ILYRRKWGPSDGLGALVISPTRELAIQIFEVLRKIGSYHTFSAGLVIGGKDVKQEKDRLS 178
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
R +I+IATPGRL+ H+ T F ++VL
Sbjct: 179 R-INILIATPGRLLQHMDQTLGFDTSNVQVL 208
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 87.8 bits (208), Expect = 1e-16
Identities = 53/139 (38%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F +NL +L + A+N++ TP+QAATIP L G+DV Y+LPIL+R
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGKTAAYLLPILDR 62
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLD---VKYQESV 421
L D V +I+ PTREL Q+ S F V+ GG D + Q
Sbjct: 63 LSAGEFASD-VVNAVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGTDGVAWEQQRRG 121
Query: 422 LRRNPDIVIATPGRLIDHI 478
+ DIVIATPGRLI H+
Sbjct: 122 MAMGADIVIATPGRLISHL 140
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 87.8 bits (208), Expect = 1e-16
Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Frame = +2
Query: 47 PPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXX 226
P +E F+ + PL+ I L + + TPIQ ++ L GKD+
Sbjct: 88 PELEEKKRFHDFAIPLPLMHGIADLKFEYCTPIQEQSLEAVLAGKDLIGKANTGTGKTAV 147
Query: 227 YMLPILERLLYKAKG--GDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLD 400
+++ ++ RLL KG G R R LIL PTREL Q+ ++L ++T V GG +
Sbjct: 148 FLVGVMARLLADKKGGLGKRTPRALILAPTRELVMQIVKDAKKLGRYTGVNADAVYGGAE 207
Query: 401 VKYQESVLRR-NPDIVIATPGRLID 472
+ Q +L+R DIV+ATPGRLID
Sbjct: 208 YEKQMELLKRGKTDIVVATPGRLID 232
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 87.8 bits (208), Expect = 1e-16
Identities = 53/159 (33%), Positives = 79/159 (49%), Gaps = 1/159 (0%)
Frame = +2
Query: 8 ATIEYDSDFFEEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDV 187
+T E ++ + + + F S LLK + Y P+PIQ A P +LG+D+
Sbjct: 52 STTEVTAEVTADEAKSEPQSGFDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDL 111
Query: 188 XXXXXXXXXXXXXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTT 367
+ LP+LERL + G + +VL+L PTREL QV + +
Sbjct: 112 VGQAQTGTGKTAAFALPLLERL----ESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHP 167
Query: 368 VTVGLSV-GGLDVKYQESVLRRNPDIVIATPGRLIDHIR 481
L+V GG D + Q S LRR D+V+ TPGR++DH+R
Sbjct: 168 HLKVLAVYGGTDFRSQISTLRRGVDVVVGTPGRVMDHMR 206
>UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2;
Theileria|Rep: DEAD-box family helicase, putative -
Theileria annulata
Length = 570
Score = 87.8 bits (208), Expect = 1e-16
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Frame = +2
Query: 107 AIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERL--------LYK 262
AI + Y +PT IQ+ IP+AL GKD+ +++P L+RL L K
Sbjct: 92 AISEMGYQNPTIIQSKVIPLALEGKDLLIMMIQGSGKTASFLIPTLQRLVVSGVLKQLTK 151
Query: 263 AKGGDRV---TRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRN 433
K T+ L+++PTREL AQ V + LS++ + L GG+ +K QE+ LR+
Sbjct: 152 EKQAYNTRFGTKALVILPTRELAAQCFQVFKSLSKYLSSKAILLTGGIPIKEQENRLRQF 211
Query: 434 PDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
P+ +I TPGR +D + N+ S + IEV+
Sbjct: 212 PETIICTPGRALDMLINSSSINVENIEVV 240
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 87.8 bits (208), Expect = 1e-16
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 3/150 (2%)
Frame = +2
Query: 38 EEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXX 217
E PP + E SF L ++ + +Y PTPIQ IP+ L G+D+
Sbjct: 167 ENPPDHVE--SFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGK 224
Query: 218 XXXYMLPILERLLYKAKGGDRVTR---VLILVPTRELGAQVHTVTRQLSQFTTVTVGLSV 388
+MLP++ LL K + TR ++I+ PTREL Q+H R+ + T + V +S
Sbjct: 225 TAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSY 284
Query: 389 GGLDVKYQESVLRRNPDIVIATPGRLIDHI 478
GG V++Q ++R +++ATPGRL+D I
Sbjct: 285 GGTAVQHQLQLMRGGCHVLVATPGRLLDFI 314
>UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF15032, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 574
Score = 87.4 bits (207), Expect = 2e-16
Identities = 53/146 (36%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Frame = +2
Query: 86 LSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLYKA 265
+S LK + L + H T IQ TI L G+DV +++P +E L+YK
Sbjct: 68 VSENTLKGVKELGFEHMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPCIE-LIYKL 126
Query: 266 KGGDRV-TRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPDI 442
K R T V+IL PTREL Q + V ++L T GL +GG + + L +I
Sbjct: 127 KFMPRNGTGVIILSPTRELAMQTYGVMKELMTHHVHTYGLIMGGSNRSAEAQKLANGINI 186
Query: 443 VIATPGRLIDHIRNTPSFGLHAIEVL 520
++ATPGRL+DH++NTP F ++ L
Sbjct: 187 LVATPGRLLDHLQNTPGFMFKNLQCL 212
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 87.4 bits (207), Expect = 2e-16
Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 1/136 (0%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + L PLL+ + LNY PTP+QA IP L GKDV + LP+L+
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQ 61
Query: 248 RLLYKAKG-GDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVL 424
RL+ RVL+LVPTREL QV + + + GG+ + Q L
Sbjct: 62 RLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMKL 121
Query: 425 RRNPDIVIATPGRLID 472
R+ D+++ATPGRL+D
Sbjct: 122 RKGVDVLVATPGRLLD 137
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 87.4 bits (207), Expect = 2e-16
Identities = 49/135 (36%), Positives = 73/135 (54%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + L+R LL AI Y PT IQ+ IP L G D+ Y LPIL
Sbjct: 6 NFEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALPILM 65
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
++ Y A+G + R +I PTREL Q+ +QL+++T + + GG+ K Q+ L+
Sbjct: 66 KIKY-AQGHN--PRAVIFGPTRELVMQIEIAMKQLAKYTDLRIVALYGGIGPKLQKEHLQ 122
Query: 428 RNPDIVIATPGRLID 472
+ DI++ATPGR +D
Sbjct: 123 KGVDIIVATPGRFLD 137
>UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=6;
Actinomycetales|Rep: Possible ATP-dependent RNA helicase
- Rhodococcus sp. (strain RHA1)
Length = 632
Score = 87.4 bits (207), Expect = 2e-16
Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Frame = +2
Query: 41 EPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXX 220
E P + +F + L PL++A+ + P+PIQA +P AL G +V
Sbjct: 18 ETPDQNATVTFAEIGLPAPLVQALARNSITVPSPIQALAVPDALAGTNVLGRAQTGSGKT 77
Query: 221 XXYMLPILERLL-YKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGL 397
+ LP+L RL ++ + + R L+LVPTREL QV + +TV +VGG
Sbjct: 78 LAFGLPMLTRLSRHEDRPAPKRPRALVLVPTRELAFQVVDSLNSYAGAMGLTVRPAVGGT 137
Query: 398 DVKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEV 517
Q LRR DI++ATPGRL DH+R L +IE+
Sbjct: 138 PFSKQVDQLRRGVDILVATPGRLNDHLRQGTCI-LDSIEI 176
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 87.4 bits (207), Expect = 2e-16
Identities = 50/137 (36%), Positives = 69/137 (50%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF N ++ + A Y PTPIQA IP + G DV Y LPI++
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
++L +G RV R L++ PTREL Q+ R L Q + GG+++ Q LR
Sbjct: 62 KMLSTPRG--RV-RTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLR 118
Query: 428 RNPDIVIATPGRLIDHI 478
D+V+A PGRL+DHI
Sbjct: 119 SGVDVVVACPGRLLDHI 135
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 87.4 bits (207), Expect = 2e-16
Identities = 55/154 (35%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + LS+P+L+A+ Y PTPIQ IP L G+D+ +MLP ++R
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 251 LLYKAKGGDRVT----RVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
L + +R+ R+L+L PTREL +Q+ + + V VGG V +
Sbjct: 64 L---READNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRN 120
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
L R DI+IATPGRL+D I + +F L ++EVL
Sbjct: 121 KLHRGTDILIATPGRLLDLI-DQKAFNLGSVEVL 153
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 87.4 bits (207), Expect = 2e-16
Identities = 48/134 (35%), Positives = 67/134 (50%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + L L+KA+ L Y PTPIQ IP L GK+V ++LP+L R
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
K + R +IL PTREL QV Q +++ +T GG+D Q+ L
Sbjct: 63 FADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 431 NPDIVIATPGRLID 472
D+++ATPGRL+D
Sbjct: 123 GVDLLVATPGRLLD 136
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 87.0 bits (206), Expect = 2e-16
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + L +LK + L Y PT IQ +IPVAL KD+ ++LP+++
Sbjct: 10 TFKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVALQKKDIIGIAQTGSGKTASFLLPMVQ 69
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQ-FTTVTVGLSVGGLDVKYQESVL 424
LL K +R +I+ PTREL AQV V ++ + +T L VGG+DV Q L
Sbjct: 70 HLL-NVKEKNRGFYCIIIEPTRELAAQVVEVIDEMGKALPGLTSCLLVGGMDVMKQSVQL 128
Query: 425 RRNPDIVIATPGRLIDHIRNT 487
+ P +++ TPGR++ HI+NT
Sbjct: 129 AKRPQVIVGTPGRIVYHIKNT 149
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 87.0 bits (206), Expect = 2e-16
Identities = 48/140 (34%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + ++KA+ Y TPIQ IPVA G D+ + LP+++
Sbjct: 2 SFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQ 61
Query: 248 RLLYKAKGGDRVT-RVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVL 424
+LL K R T R LI PTREL Q+ + +++T ++V GG + QE +L
Sbjct: 62 QLLESGKSASRKTARALIFAPTRELAEQIADNIKAYTKYTNLSVAAIFGGRKMSSQERML 121
Query: 425 RRNPDIVIATPGRLIDHIRN 484
DI++ATPGRL +HI +
Sbjct: 122 ENGVDILVATPGRLEEHIES 141
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 87.0 bits (206), Expect = 2e-16
Identities = 52/168 (30%), Positives = 84/168 (50%)
Frame = +2
Query: 11 TIEYDSDFFEEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVX 190
T + +D + +++ F M L L+K I Y PTPIQ TIP+ L G+DV
Sbjct: 21 TSDRGADILKSKSKKNKSGGFQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVV 80
Query: 191 XXXXXXXXXXXXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTV 370
+++P+ E+L + + + R LIL PTREL Q + ++L +F +
Sbjct: 81 AMAKTGSGKTACFLIPLFEKL--QRREPTKGARALILSPTRELAVQTYKFIKELGRFMEL 138
Query: 371 TVGLSVGGLDVKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIE 514
L +GG + Q S + PD+++ATPGR + H+ L++IE
Sbjct: 139 KSILVLGGDSMDSQFSAIHTCPDVIVATPGRFL-HLCVEMDLKLNSIE 185
>UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP8 -
Ustilago maydis (Smut fungus)
Length = 602
Score = 87.0 bits (206), Expect = 2e-16
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 3/149 (2%)
Frame = +2
Query: 47 PPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXX 226
PP ++ SF + +S L++++ +L PTPIQ+ TIP L G+D+
Sbjct: 105 PP--KHTSFSSIGISPMLIRSLASLQIKVPTPIQSLTIPSVLEGRDLVGGAQTGSGKTLC 162
Query: 227 YMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTV--GLSVGGLD 400
+ LPIL +L+ GG V +L PTRELG Q+H + + + + L +GG+D
Sbjct: 163 FALPILNKLIKDMVGGFAV----VLTPTRELGVQLHEQFVAVGEGARMGLRCALVLGGMD 218
Query: 401 VKYQESVLRR-NPDIVIATPGRLIDHIRN 484
+ Q S L P +++ATPGRL+DH+R+
Sbjct: 219 MMKQASELANLRPHVIVATPGRLVDHLRS 247
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 86.6 bits (205), Expect = 3e-16
Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
D F ++ +L ++ Y +PTPIQ A IP +LG+D+ + L
Sbjct: 48 DNENGFLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFAL 107
Query: 236 PILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSV-GGLDVKYQ 412
P++E+L A + +VL++ PTREL QV + S +T +++ GG D + Q
Sbjct: 108 PLIEKL---ADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQ 164
Query: 413 ESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
L+R D+V+ TPGR++DHIR +F +++I L
Sbjct: 165 IYALKRKVDVVVGTPGRIMDHIRQ-GTFKVNSINCL 199
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 86.6 bits (205), Expect = 3e-16
Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 2/156 (1%)
Frame = +2
Query: 50 PYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXY 229
P ++ A F + L LL+++ AL Y PTPIQ +P + G+D+ +
Sbjct: 52 PAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAAF 111
Query: 230 MLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKY 409
LP+L RL + GD + L+LVPTREL QV + + V GG +
Sbjct: 112 ALPLLHRLT-DDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGR 170
Query: 410 QESVLRRNPDIVIATPGRLIDHI-RNTPSF-GLHAI 511
Q L + D+V+ATPGR +DH+ R T GLH +
Sbjct: 171 QVRALVQGVDVVVATPGRALDHMGRGTLRLDGLHTV 206
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 86.6 bits (205), Expect = 3e-16
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Frame = +2
Query: 62 NASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPI 241
N +F ++L LL + + TPIQA T+PVAL G+D+ +++ +
Sbjct: 8 NLNFSSLDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVV 67
Query: 242 LERLLYK---AKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQ 412
+ RLL + R LIL PTREL Q++ + + L GG+D Q
Sbjct: 68 VNRLLSRPGLVNRNPEDPRALILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDKQ 127
Query: 413 ESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEV 517
+LR+ D+VIATPGRLID+++ L E+
Sbjct: 128 REMLRKGADVVIATPGRLIDYLKQHEVVSLRVCEI 162
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 86.2 bits (204), Expect = 4e-16
Identities = 49/135 (36%), Positives = 70/135 (51%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF NL +LKAI Y PTPIQ +IP +L K V ++LPIL+
Sbjct: 2 SFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPILD 61
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
+L K + R RVLI+ PTREL Q+ ++ S++ + GG+ Q +
Sbjct: 62 KLT-KNRSEGRGPRVLIVSPTRELATQITDSIKKYSRYLRINSITITGGISYGLQNRMFS 120
Query: 428 RNPDIVIATPGRLID 472
+ DI++ATPGRL+D
Sbjct: 121 KPIDILVATPGRLLD 135
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 86.2 bits (204), Expect = 4e-16
Identities = 50/151 (33%), Positives = 77/151 (50%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + LS LK + Y PT IQ TI + L GKD+ +++PILE
Sbjct: 52 SFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPILE 111
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
RL K L++ PTREL Q+ R++ + + GL +GG D+K++ + +
Sbjct: 112 RLYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEHHEFSAGLIIGGKDLKFERNRMD 171
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+ +IVI TPGR++ H+ P F +E+L
Sbjct: 172 Q-CNIVIGTPGRILQHMDENPLFDCVNMEIL 201
>UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 56; n=1; Danio rerio|Rep: DEAD
(Asp-Glu-Ala-Asp) box polypeptide 56 - Danio rerio
Length = 344
Score = 86.2 bits (204), Expect = 4e-16
Identities = 52/143 (36%), Positives = 81/143 (56%), Gaps = 4/143 (2%)
Frame = +2
Query: 104 KAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLY-KAKGGDR 280
+A+ L + PT IQ IP+AL GKD+ Y +P+++R+L K ++
Sbjct: 3 QALADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAVPLIQRVLTSKQTVREQ 62
Query: 281 VTRVLILVPTRELGAQVHTVTRQLSQFTT--VTVGLSVGGLDVKYQESVLRRNPDIVIAT 454
R ++LVPT+ELG QV T+ RQL+ + + V V G D+ Q+ +L PDIV++T
Sbjct: 63 AVRAVVLVPTKELGQQVQTMIRQLTAYCSRDVRVADISGKADLSAQKPILMEKPDIVVST 122
Query: 455 PGRLIDHIRNTPSFGLH-AIEVL 520
P R+ HI N + LH ++E+L
Sbjct: 123 PSRIQAHI-NAQNLQLHSSLEML 144
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 86.2 bits (204), Expect = 4e-16
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Frame = +2
Query: 62 NASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPI 241
+ +F + LS +L A+ YV+PTPIQA IP L GKDV + LP+
Sbjct: 4 DVTFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPL 63
Query: 242 LERLLYKAKGG----DRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKY 409
L RL A R LI+ PTREL Q+ R+ ++ + + GG++++
Sbjct: 64 LYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEP 123
Query: 410 QESVLRRNPDIVIATPGRLID 472
Q + L+ +I++ATPGRL+D
Sbjct: 124 QIAALQAGVEILVATPGRLLD 144
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 86.2 bits (204), Expect = 4e-16
Identities = 49/137 (35%), Positives = 72/137 (52%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F +NL P+LKA+ Y PTPIQ +IP+ L GKD+ + +PIL+
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
+ LYK + + L+L PTREL Q+ ++T + + GG+ K Q LR
Sbjct: 62 K-LYKTDHRKGI-KALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALR 119
Query: 428 RNPDIVIATPGRLIDHI 478
I++ATPGRL+D I
Sbjct: 120 SGIQILVATPGRLLDLI 136
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 86.2 bits (204), Expect = 4e-16
Identities = 51/131 (38%), Positives = 70/131 (53%)
Frame = +2
Query: 80 MNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLY 259
M LS + A+ A Y+ P+PIQAA IP+AL G+DV + +PI+ERL +
Sbjct: 9 MALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIERLEH 68
Query: 260 KAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPD 439
R + LIL PTREL QV +L+ + V GG ++ Q L+R P
Sbjct: 69 GPNS--RNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAPH 126
Query: 440 IVIATPGRLID 472
IV+ TPGR+ID
Sbjct: 127 IVVGTPGRVID 137
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 86.2 bits (204), Expect = 4e-16
Identities = 47/137 (34%), Positives = 73/137 (53%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F NLS L+KAI + + TPIQA TIP+ L KDV + +P++E
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
++ ++ + +++ PTREL QV ++ Q V GG D+ Q L+
Sbjct: 64 KINPESPN----IQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALK 119
Query: 428 RNPDIVIATPGRLIDHI 478
+NP+I++ TPGRL+DHI
Sbjct: 120 KNPNIIVGTPGRLLDHI 136
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 85.8 bits (203), Expect = 5e-16
Identities = 49/137 (35%), Positives = 71/137 (51%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + LS +LKA+ + + P+PIQA IP L GKDV + +PI+E
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVE 66
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
RL+ G R + L+L PTREL QV ++ + V GG ++ Q LR
Sbjct: 67 RLV----PGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLR 122
Query: 428 RNPDIVIATPGRLIDHI 478
D+VI TPGR++DH+
Sbjct: 123 FGVDVVIGTPGRILDHL 139
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 85.8 bits (203), Expect = 5e-16
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
E ++F N S L KA+ + ++ P+PIQA TIP+ L G+D + LP
Sbjct: 4 EISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALP 63
Query: 239 ILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQF-TTVTVGLSVGGLDVKYQE 415
IL+ L + T+ LIL PTREL QV LS++ VT+ + GG + Q
Sbjct: 64 ILQNLSPEIS----TTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQL 119
Query: 416 SVLRRNPDIVIATPGRLIDHI 478
LR +V+ TPGR++DHI
Sbjct: 120 KQLRSGAQVVVGTPGRILDHI 140
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 85.8 bits (203), Expect = 5e-16
Identities = 56/153 (36%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
Frame = +2
Query: 26 SDFFEEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXX 205
+D E P E F + + +L AI A+ Y P+PIQA IPV L G D+
Sbjct: 10 ADAHEADPMTQETGGFAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQT 69
Query: 206 XXXXXXXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTV-TRQLSQFTTVTVGL 382
+ LP+L R+ R ++LIL PTREL QV T SQ V V
Sbjct: 70 GTGKTAAFALPMLSRI----DPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVA 125
Query: 383 SVGGLDVKYQESVLRRNPDIVIATPGRLIDHIR 481
GG + Q LR+ I++ATPGRL DH+R
Sbjct: 126 VYGGAPMGPQLKALRQGAQILVATPGRLCDHLR 158
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 85.8 bits (203), Expect = 5e-16
Identities = 47/130 (36%), Positives = 70/130 (53%)
Frame = +2
Query: 80 MNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLY 259
+ L + KAI + PTPIQ TIP + GKDV +++P+L++L
Sbjct: 29 IGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR 88
Query: 260 KAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPD 439
+ G R L++ PTREL Q V ++L +FT + VGG ++ Q S + NPD
Sbjct: 89 RDTTG---IRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPD 145
Query: 440 IVIATPGRLI 469
I++ATPGRL+
Sbjct: 146 ILLATPGRLL 155
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 85.8 bits (203), Expect = 5e-16
Identities = 46/137 (33%), Positives = 75/137 (54%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + LS+ ++KAI + + TPIQA TIP++L KDV + +PI+E
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
++ K + + L++ PTREL QV ++ V V GG D++ Q L+
Sbjct: 63 KVNVK----NSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALK 118
Query: 428 RNPDIVIATPGRLIDHI 478
++P +++ TPGR+IDHI
Sbjct: 119 KHPHVIVGTPGRIIDHI 135
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 85.4 bits (202), Expect = 7e-16
Identities = 47/137 (34%), Positives = 71/137 (51%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + L +++I Y+ PTPIQA TIP L GKD+ ++LPI+E
Sbjct: 25 TFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPIIE 84
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
L + K L+L PTREL AQV + +++ + GG+ ++ Q L+
Sbjct: 85 LLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYLALRSDAVFGGVSIRPQVKRLQ 144
Query: 428 RNPDIVIATPGRLIDHI 478
DI++ATPGRL+D I
Sbjct: 145 GGVDILVATPGRLLDLI 161
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 85.4 bits (202), Expect = 7e-16
Identities = 54/152 (35%), Positives = 76/152 (50%)
Frame = +2
Query: 65 ASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPIL 244
+SF + L L + L Y PTPIQ+ IP+ L G D+ + LPI+
Sbjct: 4 SSFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPII 63
Query: 245 ERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVL 424
E+L G R R L+L PTREL QV T + + + V GG+ V+ Q L
Sbjct: 64 EKLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRL 123
Query: 425 RRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+R DI++ATPGRL+D +R + L +E L
Sbjct: 124 KRGTDILVATPGRLLDLLRQ-KAISLEKLEYL 154
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 85.4 bits (202), Expect = 7e-16
Identities = 54/152 (35%), Positives = 81/152 (53%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
+ F M L+ LLKAI + PTPIQ TIPV + +DV +++P
Sbjct: 89 KGGGFQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIP 148
Query: 239 ILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
++E+L K+ R LIL P+REL Q V ++L + T + L VGG ++ Q
Sbjct: 149 MIEKL--KSHSTKFGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEEQFG 206
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSFGLHAIE 514
++ NPDIVIATPGR + H++ + L +I+
Sbjct: 207 MMAGNPDIVIATPGRFL-HLKVEMNLDLSSIK 237
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 85.0 bits (201), Expect = 9e-16
Identities = 51/153 (33%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + L L + L + PTPIQ IP L G+DV Y LP+++
Sbjct: 4 TFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLIQ 63
Query: 248 RLLYKAKG--GDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESV 421
L +++ + R LIL PTREL QV +Q +Q T + + GG ++ Q+
Sbjct: 64 MLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQEQ 123
Query: 422 LRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
L + DI+IATPGRL+DH+ T L+ +++L
Sbjct: 124 LAKGVDILIATPGRLLDHL-FTKKTSLNQLQML 155
>UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Rhodococcus sp. (strain RHA1)
Length = 465
Score = 85.0 bits (201), Expect = 9e-16
Identities = 55/151 (36%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Frame = +2
Query: 29 DFFEEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXX 208
D F P P E +F + L + A+ P PIQAATIP L G+DV
Sbjct: 4 DEFSSPAPVGE--TFLALGLPAVMTHALDRSGIGAPFPIQAATIPDVLAGRDVLGRAPTG 61
Query: 209 XXXXXXYMLPILERLLYKAKGGDR-VTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLS 385
+ LP+L RL K R R ++LVPTREL Q+ + + + V
Sbjct: 62 SGKTLAFGLPMLVRL--KGAASRRGFPRGIVLVPTRELALQIERALDEPALSVGLRVANV 119
Query: 386 VGGLDVKYQESVLRRNPDIVIATPGRLIDHI 478
VGG+ +K Q +L R D++IATPGRL DH+
Sbjct: 120 VGGIPIKRQVEILSRGVDLLIATPGRLADHV 150
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 84.6 bits (200), Expect = 1e-15
Identities = 47/141 (33%), Positives = 67/141 (47%)
Frame = +2
Query: 98 LLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGD 277
+++A + + HPTPIQ IP AL +DV + +PIL+ L K
Sbjct: 115 IVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQALWDNPKP-- 172
Query: 278 RVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPDIVIATP 457
+L PTREL Q+ L V VGG+D+ Q L + P +++ATP
Sbjct: 173 --FFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPHVIVATP 230
Query: 458 GRLIDHIRNTPSFGLHAIEVL 520
GRL DH+ NT F L ++ L
Sbjct: 231 GRLQDHLENTKGFSLRGLQYL 251
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 84.2 bits (199), Expect = 2e-15
Identities = 52/154 (33%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + L L+ A+ A Y +PTPIQAA IP AL G D+ +MLP LER
Sbjct: 31 FSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLER 90
Query: 251 LLYKAKGGD----RVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
L A R+L+L PTREL Q+ + + + + GG+++ Q +
Sbjct: 91 LKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPLRHTVLFGGMNMDKQTA 150
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
LR +IV+AT GRL+DH++ + L+ +E++
Sbjct: 151 DLRAGCEIVVATVGRLLDHVKQ-KNISLNKVEIV 183
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 84.2 bits (199), Expect = 2e-15
Identities = 45/154 (29%), Positives = 79/154 (51%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
+N +F +N+ +L++I L + PT IQ +P A L KD+ +++P
Sbjct: 154 QNVTFEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIP 213
Query: 239 ILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
IL+ L K + L++ PTREL Q+ + L + + GG+D+ Q
Sbjct: 214 ILQDL----KVNKQSFYALVISPTRELCIQISQNFQALGMNLLINICTIYGGVDIVTQSL 269
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
L + P+++++TPGR++DH+ NT F L ++ L
Sbjct: 270 NLAKKPNVIVSTPGRILDHLNNTKGFNLKNLKYL 303
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 84.2 bits (199), Expect = 2e-15
Identities = 55/158 (34%), Positives = 76/158 (48%)
Frame = +2
Query: 5 EATIEYDSDFFEEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKD 184
E +I + + + P P+ E N L K I Y PTPIQA+ P+ + G D
Sbjct: 54 EHSIVVEQNDIQVPQPFIEWKDCQFPN---QLNKRISLKAYNRPTPIQASVFPIIMSGHD 110
Query: 185 VXXXXXXXXXXXXXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFT 364
+ Y+LP L + + K G + +LILVPTREL Q+ S+
Sbjct: 111 LIGIAQTGSGKTIAYLLPGLVHIESQRKKGGPM--MLILVPTRELAMQIQEHISYFSEAY 168
Query: 365 TVTVGLSVGGLDVKYQESVLRRNPDIVIATPGRLIDHI 478
+ GG D + QE L R+PDIV+ATPGRLID +
Sbjct: 169 NMNSACIYGGADKRPQEMALARDPDIVVATPGRLIDFL 206
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 84.2 bits (199), Expect = 2e-15
Identities = 51/144 (35%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F ++S + +A+ + + TPIQA T+PV L G DV + +P+LE
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLEN 65
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
L +RV + LI+ PTREL QV +++ ++ V V GG + Q + LRR
Sbjct: 66 L-----EAERVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRR 120
Query: 431 NPDIVIATPGRLIDHI-RNTPSFG 499
+++ATPGRLIDHI R T G
Sbjct: 121 GVHVIVATPGRLIDHIERGTVDLG 144
>UniRef50_Q4HZ68 Cluster: ATP-dependent RNA helicase DBP7; n=1;
Gibberella zeae|Rep: ATP-dependent RNA helicase DBP7 -
Gibberella zeae (Fusarium graminearum)
Length = 744
Score = 84.2 bits (199), Expect = 2e-15
Identities = 56/165 (33%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Frame = +2
Query: 50 PYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGK-DVXXXXXXXXXXXXX 226
P + A+F + +S L+ +G + PT IQ IP L D
Sbjct: 145 PLSDVANFGTLTISARLVDELGKMGLERPTGIQNKVIPHMLTSSSDAFVQAETGSGKTLA 204
Query: 227 YMLPILER-LLYKAKGGDRVTR-----VLILVPTRELGAQVHTVTRQLSQ-FTTVTVGLS 385
Y+LPIL R LL KGG ++ R +I+ PTREL QVHTV +L + F +
Sbjct: 205 YLLPILHRVLLLSVKGGAQIHRDSGAFAIIVAPTRELAKQVHTVLEKLIRPFPWLVSTAI 264
Query: 386 VGGLDVKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
GG K +++ +R+ + ++ATPGRL DHI NT + L + L
Sbjct: 265 TGGESKKAEKARIRKGVNFLVATPGRLADHIDNTKALNLSIVRWL 309
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 84.2 bits (199), Expect = 2e-15
Identities = 52/164 (31%), Positives = 88/164 (53%), Gaps = 3/164 (1%)
Frame = +2
Query: 38 EEPPPYDENASFYM-MNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXX 214
+E P A F+ + +S P LK + +++ T IQA +IPV+L G DV
Sbjct: 31 DEYDPKITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSG 90
Query: 215 XXXXYMLPILERLLYKAKGGD-RVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVG 391
+++P++E+L Y+ K + LI+ PTREL Q++ V ++ T+ + GL +G
Sbjct: 91 KTLAFLVPVIEKL-YREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIG 149
Query: 392 GLDVKYQ-ESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
G DVK++ E + R N I+I TPGR++ H+ +++L
Sbjct: 150 GKDVKFELERISRIN--ILIGTPGRILQHLDQAVGLNTSNLQML 191
>UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 12 SCAF13614, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1027
Score = 83.8 bits (198), Expect = 2e-15
Identities = 57/156 (36%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIG-ALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPI- 241
+F M+L L+ + N T +Q TIPV L G+D Y +P+
Sbjct: 80 TFTQMSLHPHLVTTLNNVFNVSTVTSVQRQTIPVLLSGRDALVRSQTGSGKTLSYAIPVV 139
Query: 242 --LERLLYKAKGGDRVTRVLILVPTRELGAQVH-TVTRQLSQFTTVTVGLSVGGLDVKYQ 412
L+ L K GD LILVPTREL Q T + L FT V G+ +GG K +
Sbjct: 140 QSLQALQPKVSRGDGPL-ALILVPTRELAQQTFVTFQKLLKPFTWVVPGVLMGGEKRKAE 198
Query: 413 ESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
++ LR+ +I+++TPGRL+DHIRNT S A+ L
Sbjct: 199 KARLRKGINILVSTPGRLVDHIRNTLSISFSAVRWL 234
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 83.8 bits (198), Expect = 2e-15
Identities = 51/151 (33%), Positives = 79/151 (52%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F MNL+ LL A+ + PTP+Q+ IP +L G D+ + L +L
Sbjct: 34 TFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFALSLLT 93
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
L K + R LILVP+RE+ Q++ V +L V+V L++GG Q + L+
Sbjct: 94 TLQKKPEA-----RGLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTTGSKQANQLK 148
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+NP ++IATPGR+ DH+ L +EV+
Sbjct: 149 KNPRLIIATPGRMNDHLSGNKLL-LQNVEVI 178
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 83.8 bits (198), Expect = 2e-15
Identities = 49/135 (36%), Positives = 71/135 (52%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF +NL+ PL A+ LN+ PTPIQ + G+DV Y+LP+L
Sbjct: 10 SFQDLNLNTPLRNALEDLNFQTPTPIQEQAFSSIMSGRDVVGIAQTGTGKTFAYLLPLLR 69
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
L Y + + R+LI+VPTREL QV +L+++ + V GG+++ Q L
Sbjct: 70 MLKYSEQ---KNPRILIMVPTRELVVQVVEEIEKLAKYINLRVAGVYGGVNINTQHQDLM 126
Query: 428 RNPDIVIATPGRLID 472
+ DIV+ATP RL D
Sbjct: 127 QGLDIVVATPRRLYD 141
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 83.8 bits (198), Expect = 2e-15
Identities = 55/154 (35%), Positives = 74/154 (48%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
+ F NL +PLL AI + PTPIQ IP L G DV +++P
Sbjct: 20 KGGGFQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIP 79
Query: 239 ILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
+L L KA R L+L PTREL Q+ L++F + VGG + Q
Sbjct: 80 MLNTL--KAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQFE 137
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+L NPD+V+ATPGRL+ HI S L ++ L
Sbjct: 138 LLASNPDVVVATPGRLL-HIMEEASLHLTSVRCL 170
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 83.8 bits (198), Expect = 2e-15
Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 2/150 (1%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + +S ++++ ++ + PTPIQ +IP AL G D+ + +P++E
Sbjct: 3 NFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIE 62
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
+++ G + + LIL PTREL QV R+ S+ V V GG+ ++ Q L+
Sbjct: 63 KVV-----GKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALK 117
Query: 428 RNPDIVIATPGRLIDHI--RNTPSFGLHAI 511
+ P IV+ TPGR+IDH+ R + G+H +
Sbjct: 118 KGPQIVVGTPGRVIDHLNRRTLKTDGIHTL 147
>UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX49;
n=34; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX49 - Homo sapiens (Human)
Length = 483
Score = 83.8 bits (198), Expect = 2e-15
Identities = 53/152 (34%), Positives = 75/152 (49%)
Frame = +2
Query: 65 ASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPIL 244
A F + LS L++ L PTP+Q IP L G+D ++LPIL
Sbjct: 2 AGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPIL 61
Query: 245 ERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVL 424
++L G L+L PTREL Q+ R L + + + VGG+D+ Q L
Sbjct: 62 QKLSEDPYG----IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 425 RRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
R P +VIATPGRL DH+R++ +F + I L
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFL 149
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 83.4 bits (197), Expect = 3e-15
Identities = 49/142 (34%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
+ + SF + L L++A+ L Y PTPIQA IP L GKD+ + L
Sbjct: 3 ETSVSFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFAL 62
Query: 236 PILERLLYKAKGG-DRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQ 412
P + L + R R+LIL PTREL +Q+ ++ ++V GG+ + Q
Sbjct: 63 PSIHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQ 122
Query: 413 ESVLRRNPDIVIATPGRLIDHI 478
+L R DI++ATPGRL+D I
Sbjct: 123 MRMLDRGTDILVATPGRLLDLI 144
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 83.4 bits (197), Expect = 3e-15
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + L+ LL+A+ YV PTPIQA +IP+ L G+D+ + LP+L
Sbjct: 8 AFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLLH 67
Query: 248 RLLYKAKGGDRV-TRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVL 424
RL + + RVL+L PTREL +Q+ S+ V V GG+ +Q L
Sbjct: 68 RLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQVHQVKAL 127
Query: 425 RRNPDIVIATPGRLIDHI 478
DI++A PGRL+D I
Sbjct: 128 EEGVDIIVAAPGRLLDLI 145
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 83.4 bits (197), Expect = 3e-15
Identities = 47/136 (34%), Positives = 71/136 (52%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + L PLLKA+ L + PTPIQ IP+ L G ++ Y+LP+L+R
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
+ K +VLI+ PTREL QV +L ++ V GG ++ Q LR+
Sbjct: 64 IQRGKKA-----QVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQ 118
Query: 431 NPDIVIATPGRLIDHI 478
++++ TPGR++DHI
Sbjct: 119 GVEVIVGTPGRILDHI 134
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 83.4 bits (197), Expect = 3e-15
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Frame = +2
Query: 50 PYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXY 229
P + ++F + L ++KA+G L Y PTPIQ+ IP L KD+ +
Sbjct: 98 PKSDASAFSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAF 157
Query: 230 MLPILERLLYKAKG-GDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVK 406
LP++++LL R R +IL PTREL Q+H + + ++GG ++
Sbjct: 158 ALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIR 217
Query: 407 YQESVLRRNPDIVIATPGRLID 472
Q L + DI++ATPGRL D
Sbjct: 218 KQMRDLSKGVDILVATPGRLED 239
>UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-PA
- Drosophila melanogaster (Fruit fly)
Length = 826
Score = 83.4 bits (197), Expect = 3e-15
Identities = 45/150 (30%), Positives = 76/150 (50%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F LS+ KA+ +VHPT +Q +I AL GKDV +++P+LE
Sbjct: 74 FAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEH 133
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
L +I+ PTREL Q+ +++ + + GL +GG ++K++ + + +
Sbjct: 134 LFMNKWSRTDGVGAIIISPTRELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQ 193
Query: 431 NPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+I+I TPGRL+ H+ P F +E+L
Sbjct: 194 -CNILICTPGRLLQHMDENPLFNTSTMEML 222
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 83.4 bits (197), Expect = 3e-15
Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 3/146 (2%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
D +F M L +L+A+ + + +P+ +Q+ +IP++L GKD+ Y +
Sbjct: 20 DLECTFESMGLDNRILRALKKMGFQNPSLVQSKSIPLSLQGKDILAKARTGSGKTAAYSI 79
Query: 236 PILER-LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLD--VK 406
PI+++ L+ K K + + ++LVPTREL QV Q+S + V + G D +
Sbjct: 80 PIIQKVLMAKEKSNIKGVKAVVLVPTRELCEQVKNHFNQVSYYCQQLVSVVQLGNDKTLD 139
Query: 407 YQESVLRRNPDIVIATPGRLIDHIRN 484
Q+ +LR PD++++TP RL+ H+ N
Sbjct: 140 EQKGLLRDIPDVIVSTPTRLVQHLEN 165
>UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5;
Trypanosomatidae|Rep: DEAD box RNA helicase, putative -
Leishmania major
Length = 527
Score = 83.4 bits (197), Expect = 3e-15
Identities = 52/151 (34%), Positives = 73/151 (48%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + L + L A + HPT IQA+TI V G+D+ Y LP++
Sbjct: 54 TFQDLGLCQELCAACADAGWQHPTRIQASTITVFAEGRDLIGVAQTGSGKTGAYALPLVN 113
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
LL + K VL++VPTREL QV L + + V VGG D+ Q L
Sbjct: 114 WLLAQRK--TPYLSVLVMVPTRELAQQVTAQFVLLGRSVGLRVATLVGGADMVEQACELS 171
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+ P +V+ TPGR+ DH+ NT F L + L
Sbjct: 172 KRPHVVVGTPGRVKDHLSNTKGFKLVKLHAL 202
>UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 402
Score = 83.4 bits (197), Expect = 3e-15
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + + ++ A+ ++ + PTPIQ TI A+ G+DV +++P+L +
Sbjct: 3 FQALGVHPDIIAAVESMGWSKPTPIQEKTIKQAIAGEDVSGAAETGSGKTGAFLIPLLHQ 62
Query: 251 LLYKAKGGDRVTRV-LILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
LL K DR + +IL PTREL Q+ V + +S +T+ GG+D Q + L
Sbjct: 63 LLEK----DRPEKYGIILAPTRELVIQIAEVAQLMSAKLNITIVPIYGGVDDVEQMAQLA 118
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+ P I++ATPGRL IR+ F L + V+
Sbjct: 119 KRPHIIVATPGRLAQLIRDAKGFDLKPVRVI 149
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 83.4 bits (197), Expect = 3e-15
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
+ F M L+ LLKAI + PTPIQ +P+ L G DV +++P
Sbjct: 76 KGGGFQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIP 135
Query: 239 ILERL-LYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQE 415
++ERL + AK G R +I+ P+REL Q V ++ + T + L VGG ++ Q
Sbjct: 136 MIERLKTHSAKVG---ARGVIMSPSRELALQTLKVVKEFGRGTDLRTILLVGGDSLEEQF 192
Query: 416 SVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+ + NPDI+IATPGR + H++ L +++ +
Sbjct: 193 NSMTTNPDIIIATPGRFL-HLKVEMGLDLSSVQYI 226
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 83.0 bits (196), Expect = 4e-15
Identities = 50/146 (34%), Positives = 69/146 (47%)
Frame = +2
Query: 44 PPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXX 223
P Y ASF + LS P+ +AI Y PTP+Q +T GKDV
Sbjct: 13 PSDYVSQASFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTA 72
Query: 224 XYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDV 403
+ +PILER+ G R L++ PTREL QV L++ ++V GG +
Sbjct: 73 AFAIPILERIA----DGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASM 128
Query: 404 KYQESVLRRNPDIVIATPGRLIDHIR 481
Q L +I++ TPGR+ DHIR
Sbjct: 129 GEQLQKLEAGAEIIVGTPGRIYDHIR 154
>UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Janibacter sp. HTCC2649
Length = 514
Score = 83.0 bits (196), Expect = 4e-15
Identities = 54/158 (34%), Positives = 80/158 (50%), Gaps = 4/158 (2%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
D+ A F + + L++ + + + PTPIQAAT+P +L G+DV ++L
Sbjct: 15 DDTAGFGRLGVPESLVRVLAERDILSPTPIQAATLPDSLAGRDVLGRGRTGSGKTYAFLL 74
Query: 236 PILERLLYKAKGGDR----VTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDV 403
P+L RL + GG R R LIL PTREL Q+ L+Q +T GG+
Sbjct: 75 PMLARL---SAGGTRRQAKRPRALILAPTRELAIQIDEALAPLAQPLGITSKTVFGGVGQ 131
Query: 404 KYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEV 517
Q + + R D+V+A PGRL D + N L A+E+
Sbjct: 132 GPQVNAITRGVDVVVACPGRLED-LMNQGHVILDAVEI 168
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 83.0 bits (196), Expect = 4e-15
Identities = 52/135 (38%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F +LS +L+A+ LNY PT IQ IP + GKD+ + LPILE+
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 251 LLYKAKGGDR-VTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
L K + R TRVL+LVPTREL QV + ++ GG+ Q L+
Sbjct: 63 LSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQALK 122
Query: 428 RNPDIVIATPGRLID 472
DIV+ATPGRL+D
Sbjct: 123 SGIDIVVATPGRLLD 137
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 83.0 bits (196), Expect = 4e-15
Identities = 48/136 (35%), Positives = 69/136 (50%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + LS P+L AI Y+ T +Q IP+AL GKD+ + LP+LE+
Sbjct: 24 FDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLEQ 83
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
L K + R L++ PTREL QV ++ SQF + GG ++ Q + +
Sbjct: 84 LS-KQPNDKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQ 142
Query: 431 NPDIVIATPGRLIDHI 478
DI++ATPGRL D I
Sbjct: 143 GVDILVATPGRLFDII 158
>UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase; n=3;
Cryptosporidium|Rep: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase - Cryptosporidium
parvum Iowa II
Length = 770
Score = 83.0 bits (196), Expect = 4e-15
Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + +SR L+ + A Y T IQ T+P +L G+D+ Y++PILE
Sbjct: 73 FSDLPISRRTLEGLRAEGYYQMTLIQRDTLPHSLQGRDIIGQARTGSGKTLAYVIPILEN 132
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQF-TTVTVGLSVGGLDVKYQESVLR 427
+ LIL PTREL +QV V +++ +F +T++ G VGG D+K + S +
Sbjct: 133 IYRDNYCSIDGLLSLILTPTRELASQVFDVIKEIGKFHSTLSAGCIVGGKDIKSESSRIN 192
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+I++ATPGRLI H+ +P + + +++L
Sbjct: 193 M-LNILVATPGRLIQHMDESPLWDANNLKIL 222
>UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 868
Score = 83.0 bits (196), Expect = 4e-15
Identities = 51/137 (37%), Positives = 69/137 (50%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F S LL++I + Y PTPIQ P L G+DV ++LP++E
Sbjct: 5 TFQSFGFSPKLLESIKIIGYSLPTPIQRKCFPSILAGRDVVAMARTGSGKTAGFVLPMIE 64
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
RL + R ++L PTREL Q + V R+L+ T + V GG + Q L
Sbjct: 65 RLGCSHSQIVGI-RGVVLSPTRELALQTYRVVRKLACKTNLVVCALTGGSSLDRQFESLS 123
Query: 428 RNPDIVIATPGRLIDHI 478
NPDIV+ATPGRL HI
Sbjct: 124 GNPDIVVATPGRLFHHI 140
>UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicase,
putative; n=4; Plasmodium|Rep: DEAD/DEAH box
ATP-dependent RNA helicase, putative - Plasmodium vivax
Length = 599
Score = 83.0 bits (196), Expect = 4e-15
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
Frame = +2
Query: 38 EEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXX 217
E + F +++ L K + LN+V T IQA IP L GKD+
Sbjct: 137 ETKETFYSQTKFEDLDICEALKKGLKELNFVTLTEIQAKCIPHFLNGKDILGAAKTGSGK 196
Query: 218 XXXYMLP---ILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSV 388
+++P IL + + K G T VLI+ PTREL Q++ V + L ++ T G+ +
Sbjct: 197 TLAFLVPSINILYNIKFLPKNG---TGVLIISPTRELCLQIYQVCKDLCKYIPQTNGIII 253
Query: 389 GGLDVKYQESVLRRNPDIVIATPGRLIDHIRNTPSF 496
GG+ ++ +I+IATPGRL+DH++NT F
Sbjct: 254 GGMSRNEEKKKFIHGINILIATPGRLLDHMQNTKEF 289
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 83.0 bits (196), Expect = 4e-15
Identities = 51/152 (33%), Positives = 80/152 (52%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
++ F M L+ LL+AI + PTPIQ +IP+ L +DV +++P
Sbjct: 88 KSGGFQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAFVIP 147
Query: 239 ILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
++ERL +A R LI+ P+REL Q V ++ + T + L VGG ++ Q
Sbjct: 148 MIERL--RAHSARVGARALIMSPSRELALQTLKVVKEFGKGTDLKTVLLVGGDSLEDQFG 205
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSFGLHAIE 514
+ NPDI+IATPGR + H++ S L +I+
Sbjct: 206 FMTTNPDIIIATPGRFL-HLKVEMSLDLSSIK 236
>UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 926
Score = 82.6 bits (195), Expect = 5e-15
Identities = 44/132 (33%), Positives = 72/132 (54%)
Frame = +2
Query: 125 YVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDRVTRVLILV 304
++ T IQ TIP L G+DV Y++P++ERL + +I++
Sbjct: 103 FIKMTEIQRCTIPHILAGRDVLAASKTGSGKTLSYLVPLVERLYVQKWNPLDGLGAIIIL 162
Query: 305 PTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPDIVIATPGRLIDHIRN 484
PTREL QV V +Q ++VGL +GG +VKY++ + + +++I TPGRL+ H+
Sbjct: 163 PTRELATQVFEVFNSFTQNHDLSVGLIIGGKNVKYEKEHM-KGMNVLICTPGRLLQHMDE 221
Query: 485 TPSFGLHAIEVL 520
TP F +++L
Sbjct: 222 TPDFDCTNLQML 233
>UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Magnetococcus sp. MC-1|Rep: DEAD/DEAH box helicase
domain protein - Magnetococcus sp. (strain MC-1)
Length = 572
Score = 82.6 bits (195), Expect = 5e-15
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 6/156 (3%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + + P+L I + TPIQA T+P+AL GKDV +++ L
Sbjct: 3 FTELPIPEPVLAGIRDCGFTQCTPIQALTLPLALAGKDVAGQAQTGTGKTAAFLIGALSH 62
Query: 251 LL-----YKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQE 415
L+ + G + R+L + PTREL AQ+ + + L+ T + GG+D + Q+
Sbjct: 63 LVTHPRKHGKPAGQSLPRILAVAPTRELVAQIESDAKLLNAHTQFKLHCVYGGVDYEKQK 122
Query: 416 SVL-RRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+L + +I++ TPGRLID+ + ++GL +EVL
Sbjct: 123 RILMEEDVEILVGTPGRLIDYFKQN-AYGLKGVEVL 157
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 82.6 bits (195), Expect = 5e-15
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Frame = +2
Query: 80 MNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLY 259
++L L + I YV PTPIQ IP+A+ G+D+ + PI+ +L
Sbjct: 125 IHLGEGLNQNIRRCKYVKPTPIQRHAIPIAMAGRDLMACAQTGSGKTAAFCFPIICGILR 184
Query: 260 K--AKGGDRVT--RVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
++GG R+ LIL PTREL Q+H ++ S T + V ++ GG + Q L
Sbjct: 185 NQLSRGGARLACPTALILSPTRELSCQIHEEAKKFSYKTGLKVVVAYGGAPISQQFRNLE 244
Query: 428 RNPDIVIATPGRLIDHI 478
R DI++ATPGRL+D I
Sbjct: 245 RGVDILVATPGRLVDMI 261
>UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 17 - Arabidopsis thaliana (Mouse-ear cress)
Length = 609
Score = 82.6 bits (195), Expect = 5e-15
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Frame = +2
Query: 119 LNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDRV--TRV 292
+ + PT +QA IPV L G+DV Y+ P++ L + DR T
Sbjct: 48 MGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFA 107
Query: 293 LILVPTRELGAQVH-TVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPDIVIATPGRLI 469
L++VPTREL QV+ T+ + L +F + G +GG +++ LR+ I+IATPGRL+
Sbjct: 108 LVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEKARLRKGISILIATPGRLL 167
Query: 470 DHIRNTPSF 496
DH++NT SF
Sbjct: 168 DHLKNTASF 176
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 82.6 bits (195), Expect = 5e-15
Identities = 50/139 (35%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + L P+L+A+ L Y P+PIQA IP L G+DV + LP+L+
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQ-FTTVTVGLSVGGLDVKYQESVL 424
L + K ++L+L PTREL QV S+ V V GG Q L
Sbjct: 67 NLDPELK----APQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRAL 122
Query: 425 RRNPDIVIATPGRLIDHIR 481
R+ P IV+ TPGRL+DH++
Sbjct: 123 RQGPQIVVGTPGRLLDHLK 141
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 82.6 bits (195), Expect = 5e-15
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Frame = +2
Query: 35 FEEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXX 214
F E P A+F + + +L+AIG + Y PT IQAATIP + G DV
Sbjct: 3 FPEYSPAASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTG 62
Query: 215 XXXXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQV-HTVTRQLSQFTTVTVGLSVG 391
+ +P+L ++ +K V + L+LVPTREL QV R + + + V G
Sbjct: 63 KTAAFAIPMLSKIDITSK----VPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYG 118
Query: 392 GLDVKYQESVLRRNPDIVIATPGRLIDHI 478
G Q + LRR +V+ TPGR+IDH+
Sbjct: 119 GSSYAVQLAGLRRGAQVVVGTPGRMIDHL 147
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 82.2 bits (194), Expect = 7e-15
Identities = 47/131 (35%), Positives = 69/131 (52%)
Frame = +2
Query: 80 MNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLY 259
M++S L K++G + + PT IQ IPV L GKDV Y+LP+L +
Sbjct: 1 MDISENLKKSLGLMKFTEPTEIQEKAIPVVLTGKDVIIRSKTGSGKTAAYLLPVLNS-VE 59
Query: 260 KAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPD 439
K KG + + +I++PTREL Q H V +L + + + + GG + Q L D
Sbjct: 60 KLKG--KSVKAIIILPTRELALQTHRVASRLGKISGIKSTIVYGGASIIRQVEEL-PGSD 116
Query: 440 IVIATPGRLID 472
IVI TPGR++D
Sbjct: 117 IVIGTPGRILD 127
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 82.2 bits (194), Expect = 7e-15
Identities = 51/138 (36%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F +NLS + AI + + +PIQ+ IPV L GKD+ + +P +E
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFT-TVTVGLSVGGLDVKYQESVLR 427
L ++K + LIL PTREL QV R+L ++ V GG +++ Q LR
Sbjct: 71 LEVESKH----LQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRALR 126
Query: 428 RNPDIVIATPGRLIDHIR 481
+NP IVIATPGR++DH+R
Sbjct: 127 KNPQIVIATPGRMMDHMR 144
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 82.2 bits (194), Expect = 7e-15
Identities = 51/146 (34%), Positives = 73/146 (50%)
Frame = +2
Query: 41 EPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXX 220
+P +F M LS L + + A +++PTP+Q IP AL G+D+
Sbjct: 19 DPERRQRLTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKT 78
Query: 221 XXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLD 400
+++P LE L G +VLILVPTREL QVH V QL + L +GG
Sbjct: 79 LAFIIPALEMLRDTEPCG---VQVLILVPTRELAMQVHGVYEQLKGKKLKSAALVMGGTS 135
Query: 401 VKYQESVLRRNPDIVIATPGRLIDHI 478
+ Q +R +V+ATPGRL D++
Sbjct: 136 ERNQIQSIRSGARVVVATPGRLEDYM 161
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 82.2 bits (194), Expect = 7e-15
Identities = 53/140 (37%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + LS PLL+ + L Y P+PIQAATIP+ L +DV + LPIL R
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSV----GGLDVKYQES 418
+ K + L+L PTREL Q V ++ T G V GG Q S
Sbjct: 69 IDIK----QTTPQALVLAPTRELAIQ---VAEAFQRYATYIPGFHVLPIYGGQSYGAQLS 121
Query: 419 VLRRNPDIVIATPGRLIDHI 478
LRR +V+ TPGR+IDH+
Sbjct: 122 ALRRGVHVVVGTPGRVIDHL 141
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 82.2 bits (194), Expect = 7e-15
Identities = 48/135 (35%), Positives = 69/135 (51%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + L++ +LKA+ L Y P+PIQ IP AL G+DV + PIL+
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQ 61
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
RL G R R LIL PTREL Q+ + + + GG+ + Q L+
Sbjct: 62 RLGGDIPAG-RPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLK 120
Query: 428 RNPDIVIATPGRLID 472
+ DI++ATPGRL+D
Sbjct: 121 KGVDILVATPGRLLD 135
>UniRef50_Q1JTF7 Cluster: ATP-dependent RNA helicase, putative; n=1;
Toxoplasma gondii RH|Rep: ATP-dependent RNA helicase,
putative - Toxoplasma gondii RH
Length = 574
Score = 82.2 bits (194), Expect = 7e-15
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Frame = +2
Query: 59 ENA-SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
ENA +F + + L++ +L+ HP+PIQ ++P L GK+V Y
Sbjct: 129 ENAPTFASLGVPPALIRTAASLHIFHPSPIQVLSLPHTLRGKNVCGLAPTGSGKTLGYCW 188
Query: 236 PILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQE 415
P+L+R+ +G L+L+P REL QV R V V L +GG D+ +
Sbjct: 189 PLLQRI---GRGDGHAFMGLVLLPARELAIQVLDQFRIYGVQLGVRVCLLLGGRDLVEEG 245
Query: 416 SVLRRNPDIVIATPGRLIDHIRNTP 490
+L + P IVIATPGR+ DH++N P
Sbjct: 246 KLLDQCPHIVIATPGRMSDHVQNDP 270
>UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX56;
n=25; Theria|Rep: Probable ATP-dependent RNA helicase
DDX56 - Homo sapiens (Human)
Length = 547
Score = 82.2 bits (194), Expect = 7e-15
Identities = 49/146 (33%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
E F M L LL+A+ L + PT IQ IP+AL GKD+ Y +P
Sbjct: 5 EALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIP 64
Query: 239 ILERLLYKAKGG---DRVTRVLILVPTRELGAQVHTVTRQLSQFTT--VTVGLSVGGLDV 403
+L+ LL++ G ++ R L+LVPT+EL Q ++ +QL+ + V V D
Sbjct: 65 MLQLLLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQQLATYCARDVRVANVSAAEDS 124
Query: 404 KYQESVLRRNPDIVIATPGRLIDHIR 481
Q +VL PD+V+ TP R++ H++
Sbjct: 125 VSQRAVLMEKPDVVVGTPSRILSHLQ 150
>UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Saccharomyces cerevisiae (Baker's yeast)
Length = 995
Score = 82.2 bits (194), Expect = 7e-15
Identities = 48/152 (31%), Positives = 79/152 (51%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
+ SF LS+ +L I + PTPIQ TIP+ L +D+ ++LP
Sbjct: 135 KKGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILP 194
Query: 239 ILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
++E+L K+ G R +IL P+REL Q V + ++ T + L GG ++ Q
Sbjct: 195 MVEKL--KSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFG 252
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSFGLHAIE 514
++ NPD++IATPGR + H++ + L ++E
Sbjct: 253 MMMTNPDVIIATPGRFL-HLKVEMNLDLKSVE 283
>UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
R27090_2 - Ornithorhynchus anatinus
Length = 332
Score = 81.8 bits (193), Expect = 9e-15
Identities = 51/152 (33%), Positives = 76/152 (50%)
Frame = +2
Query: 65 ASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPIL 244
A F + L+ L++ L PTP+Q + +P L G+D ++LPIL
Sbjct: 2 AGFGALGLAPWLVEQCQQLGLRQPTPVQQSCVPAILEGRDCMGCAKTGSGKTAAFVLPIL 61
Query: 245 ERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVL 424
++L G L+L PTREL Q+ R L + + + VGG+D+ Q L
Sbjct: 62 QKLSEDPYG----IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIVVGGMDMVTQALDL 117
Query: 425 RRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
R P +VIATPGRL DH+R++ +F + I L
Sbjct: 118 SRKPHVVIATPGRLADHLRSSSTFSIKKIRFL 149
>UniRef50_Q08BL1 Cluster: Zgc:153386; n=2; Danio rerio|Rep:
Zgc:153386 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 558
Score = 81.8 bits (193), Expect = 9e-15
Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F+ NL L++ + N +HPT +Q TIP L G+++ Y+LPI+
Sbjct: 152 TFHCFNLCPELVETLQRQNIIHPTTVQLQTIPKILKGRNILCAAETGSGKTLTYLLPIIH 211
Query: 248 RLLYK-AKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDV-KYQESV 421
RL G +R R +++VP+REL QV++V R +S+ + V + GG V + +
Sbjct: 212 RLQEDLLAGSERSIRAVVIVPSRELAEQVNSVARSVSERFGLVVKVVGGGRGVGTIKAAF 271
Query: 422 LRRNPDIVIATPGRLI 469
R PDI+++TPG L+
Sbjct: 272 ARGQPDILVSTPGALL 287
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 81.8 bits (193), Expect = 9e-15
Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F M+ LS L+ + A N PTPIQ IP L G+DV + LP+L+
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 251 LLYKA-KGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
L+ K R R LIL PTREL +Q+ R ++ + + + + VGG+ + Q
Sbjct: 133 LMKAGTKPAPRTCRGLILAPTRELVSQICESLRAFTEGSHLKLQVIVGGVAIGPQIKRAE 192
Query: 428 RNPDIVIATPGRLID 472
R D+++ATPGRLID
Sbjct: 193 RGADLIVATPGRLID 207
>UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_158_41121_38797 - Giardia lamblia
ATCC 50803
Length = 774
Score = 81.8 bits (193), Expect = 9e-15
Identities = 55/139 (39%), Positives = 77/139 (55%), Gaps = 3/139 (2%)
Frame = +2
Query: 86 LSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERL-LYK 262
LS P+LKAI +L Y T IQ A IPV + G D Y +P++ L ++
Sbjct: 41 LSPPVLKAIHSLGYSTLTSIQKAAIPVIIDGGDACVVSKTGSGKTAAYSIPLVNLLGCHR 100
Query: 263 AKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFT--TVTVGLSVGGLDVKYQESVLRRNP 436
A G R L++ PTREL Q+ V R+LS+FT + V L VGG ++ Q + L NP
Sbjct: 101 ATTG---IRGLVIAPTRELCVQIGGVIRKLSRFTDPELRVCLLVGGEALEKQFTALTANP 157
Query: 437 DIVIATPGRLIDHIRNTPS 493
DI++ TPGR++ HI + S
Sbjct: 158 DIIVCTPGRIL-HIHDQVS 175
>UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=48; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 452
Score = 81.4 bits (192), Expect = 1e-14
Identities = 50/155 (32%), Positives = 72/155 (46%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
+ F + L LLK + N+ T IQ IP+ + G+D+ ++L
Sbjct: 2 ESTLQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVL 61
Query: 236 PILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQE 415
P+L + L + R LILVPTREL QV+ R + + T L GG + Q
Sbjct: 62 PMLHKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQV 121
Query: 416 SVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
L R P ++ATPGRL DH+ + F L +E L
Sbjct: 122 KALARGPRFIVATPGRLADHLDHRSLF-LEGLETL 155
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 81.4 bits (192), Expect = 1e-14
Identities = 43/135 (31%), Positives = 69/135 (51%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F L +++A+ L+Y+ PTPIQ IP+AL GKD+ + +PI E
Sbjct: 6 FTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPICES 65
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
++++ + + + L+L PTREL QV + + V V + GG Q L++
Sbjct: 66 IVWE----ENLPQALVLEPTRELAYQVKDEIFNVGRMKRVKVPVVFGGFPFDKQALTLKQ 121
Query: 431 NPDIVIATPGRLIDH 475
IV+ TPGR++DH
Sbjct: 122 KSHIVVGTPGRVLDH 136
>UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_112, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 754
Score = 81.4 bits (192), Expect = 1e-14
Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
Frame = +2
Query: 101 LKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDR 280
+KA+ + YV T +Q AT+ V L GKD ++LP +E +L KA +R
Sbjct: 297 VKALSSAGYVQMTRVQEATLDVCLEGKDALVKAKTGTGKSAAFLLPAIEAVL-KATSSNR 355
Query: 281 VTR-----VLILVPTRELGAQVHTVTR-QLSQFTTVTVGLSVGGLDVKYQESVLRRNP-D 439
+ R VLIL PTRE+ +Q+ L + V +GG K+ + L +P
Sbjct: 356 IQRVPPILVLILCPTREIASQIAAEANVMLKYHDGIGVQTLIGGTRFKFDQKRLESDPCQ 415
Query: 440 IVIATPGRLIDHIRNTPSFGL 502
I++ATPGRL+DHI N SF +
Sbjct: 416 IIVATPGRLLDHIENKGSFSV 436
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 81.4 bits (192), Expect = 1e-14
Identities = 45/145 (31%), Positives = 76/145 (52%)
Frame = +2
Query: 86 LSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLYKA 265
+S+ L + +V PT IQ IPVAL G+DV +++PI+E L +
Sbjct: 57 ISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPIIETLWRQK 116
Query: 266 KGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPDIV 445
L++ PTREL Q V ++ ++ GL +GG D+K ++ + + +IV
Sbjct: 117 WTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRIMKT-NIV 175
Query: 446 IATPGRLIDHIRNTPSFGLHAIEVL 520
+ TPGRL+ H+ TP+F ++++L
Sbjct: 176 VCTPGRLLQHMDETPNFDCTSLQIL 200
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 81.4 bits (192), Expect = 1e-14
Identities = 46/140 (32%), Positives = 73/140 (52%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
++ F M L L +AI + + PTPIQ IP L G+D+ +++P
Sbjct: 8 KSGGFESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIP 67
Query: 239 ILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
++ +L + R LIL+PTREL Q+ +V + L +F+ + + VGG + Q
Sbjct: 68 LINKLQNHSTVVG--IRGLILLPTRELALQIASVLKALLKFSDIQYSIMVGGHGFEGQFE 125
Query: 419 VLRRNPDIVIATPGRLIDHI 478
L NPDI+I TPGR++ H+
Sbjct: 126 SLASNPDILICTPGRVLQHL 145
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 81.4 bits (192), Expect = 1e-14
Identities = 47/151 (31%), Positives = 78/151 (51%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + LS LL+++ ++ + TPIQA TIP AL GKD+ + LP+L+
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
K + +++ PTREL QV ++ + V + GG D+ Q L+
Sbjct: 63 ----KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALK 118
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
++P I++ TPGR++DHI N + L +E +
Sbjct: 119 KHPHIIVGTPGRILDHI-NRKTLRLQNVETV 148
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 81.4 bits (192), Expect = 1e-14
Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + + L+KA L + +P+ IQA +P AL GKDV + +PIL+
Sbjct: 10 TFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQ 69
Query: 248 RLLY--------KAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDV 403
LL K + D +L PTREL Q+ L ++ + VGG+D
Sbjct: 70 ALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDR 129
Query: 404 KYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
Q L + P +++ATPGRL DH+ +T F L +++ L
Sbjct: 130 MQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYL 168
>UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=8; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio vulnificus
Length = 447
Score = 81.0 bits (191), Expect = 2e-14
Identities = 52/150 (34%), Positives = 72/150 (48%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + L LLK + L++ T IQ IPVA+ GKD+ ++LP+L +
Sbjct: 7 FKDLGLDNRLLKNLKHLDFQKATKIQQQAIPVAIAGKDLLASSKTGSGKTLAFVLPMLHK 66
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
L R R +IL PTREL QV+ R + + L VGG + Q L R
Sbjct: 67 SLKTKALSARDPRGVILAPTRELAKQVYGELRTMLGGLSYDATLIVGGENFNDQVKALAR 126
Query: 431 NPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
P ++ATPGRL DH+ + F L +E L
Sbjct: 127 YPKFIVATPGRLADHLEHKSVF-LEGLETL 155
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 81.0 bits (191), Expect = 2e-14
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + L +LK++ A Y + TP+Q IP AL G D+ ++LP ++
Sbjct: 2 SFSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGKTAAFLLPSIQ 61
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVH----TVTRQLSQFTTVTVGLSVGGLDVKYQE 415
RLL + RVL+L PTREL QV T +++ +F T + VGG Q
Sbjct: 62 RLLAEPAVKSIGPRVLVLTPTRELALQVEKAAMTYGKEMRRFRTACL---VGGAPYGLQL 118
Query: 416 SVLRRNPDIVIATPGRLIDHI 478
L + D+V+ATPGRLIDH+
Sbjct: 119 KRLSQPVDVVVATPGRLIDHL 139
>UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 750
Score = 81.0 bits (191), Expect = 2e-14
Identities = 48/166 (28%), Positives = 81/166 (48%)
Frame = +2
Query: 23 DSDFFEEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXX 202
D D F PY F + LS+ + + YV T IQ A++P +L G+D+
Sbjct: 59 DGDSFS---PYAGCDRFDRLPLSQKTIDGLKKSEYVTMTEIQRASLPHSLCGRDILGAAK 115
Query: 203 XXXXXXXXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGL 382
+++P+LE+L G + +I+ PTREL Q+ V + + ++ + + GL
Sbjct: 116 TGSGKTLAFLIPVLEKLYRLRWGPEDGVGSIIISPTRELTGQLFDVLKSVGKYHSFSAGL 175
Query: 383 SVGGLDVKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+GG E +I++ TPGRL+ H+ TP+F ++VL
Sbjct: 176 LIGGRKDVGMEKEHVNELNILVCTPGRLLQHMDETPNFDCSQLQVL 221
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 80.6 bits (190), Expect = 2e-14
Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Frame = +2
Query: 53 YDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYM 232
+ + F + + P+L+AI Y PTPIQA IP+ L G D+ +
Sbjct: 78 HTDTMQFRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFA 137
Query: 233 LPILERL-LYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKY 409
+P+L+ L K R R LI+ PTREL Q+ + + T +T + GG++
Sbjct: 138 IPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNP 197
Query: 410 QESVLRRNPDIVIATPGRLID-------HIRNTPSFGL 502
Q + L++ DI+IATPGRL+D H+RN F L
Sbjct: 198 QTASLQKGIDILIATPGRLLDLMNQGHLHLRNIEFFVL 235
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 80.6 bits (190), Expect = 2e-14
Identities = 50/137 (36%), Positives = 69/137 (50%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + I L Y PTPIQ IP AL G+DV ++LPIL+
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
RL+ +G RV R +I+ PTREL Q+ V L ++T + GG+ + Q LR
Sbjct: 62 RLMRGPRG--RV-RAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLR 118
Query: 428 RNPDIVIATPGRLIDHI 478
R +I + PGRL+DH+
Sbjct: 119 RGVEIAVVCPGRLLDHL 135
>UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein
precursor; n=2; Actinomycetales|Rep: DEAD/DEAH box
helicase domain protein precursor - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 507
Score = 80.6 bits (190), Expect = 2e-14
Identities = 49/139 (35%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Frame = +2
Query: 65 ASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPIL 244
A F + + L + V PTPIQAAT+P +L G+DV ++LP++
Sbjct: 8 AGFADLGVPASLAAVLADRGIVQPTPIQAATLPDSLAGRDVLGRGRTGSGKTYAFLLPLV 67
Query: 245 ERLLYKAKGGD-RVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESV 421
RL + R R L+L PTREL Q+ + L++ +T GG+ Q
Sbjct: 68 ARLTASGRPAQARKPRALVLAPTRELVNQIEEALKPLARTAGLTTQTVFGGVGQNPQVQG 127
Query: 422 LRRNPDIVIATPGRLIDHI 478
LRR DIV+A PGRL D I
Sbjct: 128 LRRGADIVLACPGRLEDLI 146
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 80.2 bits (189), Expect = 3e-14
Identities = 50/153 (32%), Positives = 72/153 (47%)
Frame = +2
Query: 62 NASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPI 241
+ F M L++ L + Y PTPIQ IP L G D+ Y++PI
Sbjct: 12 SGGFQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPI 71
Query: 242 LERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESV 421
+ RL + G R LI+ PTREL Q V +L + T + L +GG + Q
Sbjct: 72 INRLETHSTEG---VRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKLSDQFDN 128
Query: 422 LRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
L PDI++ATPGRL I + L+ +E++
Sbjct: 129 LSSGPDIIVATPGRL-TFILEGANISLNRVEMV 160
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 80.2 bits (189), Expect = 3e-14
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
+ F + ++ LLK + A P PIQ IP L G+D+ + L
Sbjct: 84 ENTGGFAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSL 143
Query: 236 PILERLLYKA-KGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQ 412
PIL++++ K + R LIL PTREL Q+ R +S+ ++ L +GG+ Q
Sbjct: 144 PILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSKLSQ 203
Query: 413 ESVLRRNPDIVIATPGRLIDHIRN 484
+ D++IATPGRL D +R+
Sbjct: 204 IKRIAPGIDVLIATPGRLTDLMRD 227
>UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2;
Idiomarina|Rep: ATP-dependent RNA helicase - Idiomarina
loihiensis
Length = 409
Score = 80.2 bits (189), Expect = 3e-14
Identities = 45/129 (34%), Positives = 67/129 (51%)
Frame = +2
Query: 134 PTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDRVTRVLILVPTR 313
P +Q +IP AL G+D+ ++LP L+ LL + R+L+L PTR
Sbjct: 26 PAKVQQQSIPAALDGRDLLISAPTGTGKTLAFLLPALQHLLDFPRQQPGPARILVLAPTR 85
Query: 314 ELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPDIVIATPGRLIDHIRNTPS 493
EL Q+H +Q T +T + GG++ Q SVL + DI++ATPGRL+D +
Sbjct: 86 ELAEQIHEQAKQFEAKTGLTSVVVTGGINYGSQLSVLEKTHDILVATPGRLMD-LLEAEQ 144
Query: 494 FGLHAIEVL 520
+ L IE L
Sbjct: 145 YNLEGIEWL 153
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 80.2 bits (189), Expect = 3e-14
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Frame = +2
Query: 50 PYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXY 229
P + F+ NL ++++I L + + +PIQA +P L G+D+ +
Sbjct: 93 PAEGKVRFHDFNLDARIMRSIQDLGFSYASPIQAEALPYTLAGRDIIGKAQTGTGKTAAF 152
Query: 230 MLPILERLLYKAKGGDRVT---RVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLD 400
++ +L++LL K +R R LIL PTREL Q+ LS++ + + +GG+D
Sbjct: 153 LITVLQKLL-TVKPEERFASEPRALILAPTRELAMQIAKDADGLSKYADLNIVTVLGGVD 211
Query: 401 V-KYQESVLRRNPDIVIATPGRLIDHIR 481
K +E + D+V+ATPGRL+D+++
Sbjct: 212 YDKQKEQLENEVVDVVVATPGRLLDYLQ 239
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 80.2 bits (189), Expect = 3e-14
Identities = 46/135 (34%), Positives = 71/135 (52%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + LS L + N+ PTPIQ+ I AL GKD+ ++LP ++
Sbjct: 3 NFSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQ 62
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
L + + R LIL PTREL Q++ Q+++ T + ++VGGL+ + Q +R
Sbjct: 63 LLSTEPRQPG--VRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIR 120
Query: 428 RNPDIVIATPGRLID 472
+IV+ATPGRL D
Sbjct: 121 GGANIVVATPGRLYD 135
>UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Marinomonas|Rep: DEAD/DEAH box helicase domain
protein - Marinomonas sp. MWYL1
Length = 417
Score = 80.2 bits (189), Expect = 3e-14
Identities = 44/135 (32%), Positives = 69/135 (51%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF ++L + +AI L + PT IQ IP+AL G D+ + P ++
Sbjct: 18 SFAELDLDFTIEQAISDLGFEAPTEIQEQAIPIALDGSDLLATAPTGTGKTIAFCAPAVQ 77
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
+L + + +VLIL P+REL Q+ V QL++ T + L +GG Q+ L
Sbjct: 78 HILDRDEQSTTAPKVLILAPSRELARQIFNVVEQLTKHTRIQSHLIIGGTPYGMQQQQLS 137
Query: 428 RNPDIVIATPGRLID 472
DI++ATPGRL++
Sbjct: 138 EPCDILVATPGRLVE 152
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 80.2 bits (189), Expect = 3e-14
Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
+E ++ + LS ++KAI YV TP+QA IP + KDV + +
Sbjct: 9 NEVVNYADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFAFGI 68
Query: 236 PILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSV-GGLDVKYQ 412
P++E + ++ D V + L+L PTREL Q+ R L +F + + GG ++ Q
Sbjct: 69 PMVEHIDPES---DAV-QALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQ 124
Query: 413 ESVLRRNPDIVIATPGRLIDHIR 481
+ L+++P IV+ATPGRL+DH++
Sbjct: 125 ITTLKKHPQIVVATPGRLMDHMK 147
>UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia
theta|Rep: DEAD box protein - Guillardia theta
(Cryptomonas phi)
Length = 386
Score = 80.2 bits (189), Expect = 3e-14
Identities = 43/139 (30%), Positives = 73/139 (52%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + + + + + A+ + T +Q TIP L+GKD+ Y+LP+L++
Sbjct: 4 FDQIGICKQISRVCEAVGFKKATKVQVYTIPHFLIGKDLLVYSQTGSGKTLAYILPLLQK 63
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
LLYK +I+VP+REL Q+ T +S + + GG+D Q ++
Sbjct: 64 LLYKKNN----YLPIIIVPSRELVFQISTTFETISCVFNIRIASLTGGIDPNVQLVMISS 119
Query: 431 NPDIVIATPGRLIDHIRNT 487
NPDI+I+TPGRL++ ++ T
Sbjct: 120 NPDIIISTPGRLVEILKLT 138
>UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 394
Score = 80.2 bits (189), Expect = 3e-14
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 1/141 (0%)
Frame = +2
Query: 65 ASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGK-DVXXXXXXXXXXXXXYMLPI 241
++++ +L +++AI + PTPIQ + A G+ D+ + LPI
Sbjct: 17 SAWFEFDLHPLIMRAIQDCGFTTPTPIQRECLLPATKGRCDIIGAAQTGSGKTLAFALPI 76
Query: 242 LERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESV 421
L+RLL ++G D V R LI+ PTREL QV + R ++ +T + V VGG+ + QE +
Sbjct: 77 LQRLL--SQGID-VLRALIVAPTRELALQVCAMMRAVAVYTKIDVCPVVGGMSKEKQERL 133
Query: 422 LRRNPDIVIATPGRLIDHIRN 484
L R P +++ATPGR+ D +++
Sbjct: 134 LNRKPAVIVATPGRMWDTMQS 154
>UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2;
Theileria|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 663
Score = 80.2 bits (189), Expect = 3e-14
Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 6/151 (3%)
Frame = +2
Query: 86 LSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLYKA 265
L+ LLK++ A +V T IQ +IP L G +++P L+RL+
Sbjct: 79 LNTRLLKSLEANGFVKITHIQRCSIPKVLNGATTLIRSPSGTGKTLTFIVPALQRLI-AP 137
Query: 266 KGGDRVTR-----VLILVPTRELGAQVHTVTRQLSQ-FTTVTVGLSVGGLDVKYQESVLR 427
++TR +LI+ PTREL Q+ VT LS+ F + V GG K +++ +R
Sbjct: 138 PDNKKITRRDGTKILIITPTRELSFQISKVTEDLSKPFPWIVVSCIKGGESRKSEKARIR 197
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+ +VI TPGR++DH+ +T SF L +E+L
Sbjct: 198 KGITVVIGTPGRVLDHMESTSSFKLDNLEML 228
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 79.8 bits (188), Expect = 3e-14
Identities = 56/153 (36%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + LS +LKA+ Y P PIQ IP L GKD+ ++LPIL+
Sbjct: 10 SFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQ 69
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTV-GLSV-GGLDVKYQESV 421
L K G +R L+LVPTREL QV V + S + L+V GG+ + Q +
Sbjct: 70 MLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINPQ-MI 128
Query: 422 LRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+ +I+IATPGRL+D + ++ + L +EVL
Sbjct: 129 QLQGVEILIATPGRLLDLV-DSKAVYLSDVEVL 160
>UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Flavobacteria|Rep: DEAD/DEAH box helicase domain
protein - Flavobacterium johnsoniae UW101
Length = 450
Score = 79.8 bits (188), Expect = 3e-14
Identities = 46/137 (33%), Positives = 78/137 (56%), Gaps = 1/137 (0%)
Frame = +2
Query: 65 ASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPIL 244
++F NL + L KA+ L +V PTPIQ + V + G+D+ Y+LP+L
Sbjct: 2 STFEKFNLPKSLQKAVDELGFVTPTPIQEKSFSVIMSGRDMMGIAQTGTGKTFAYLLPLL 61
Query: 245 ERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTV-TVGLSVGGLDVKYQESV 421
+ LYK + ++++LVPTREL QV +L+++ +V T+G+ GG+++ Q+
Sbjct: 62 K--LYKFTHTN-TPKIVVLVPTRELVVQVVEEVEKLTKYMSVKTLGI-YGGVNINTQKKA 117
Query: 422 LRRNPDIVIATPGRLID 472
+ DI++ TPGR +D
Sbjct: 118 VYEGVDILVGTPGRTMD 134
>UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3;
Actinobacteria (class)|Rep: ATP-dependent RNA helicase -
marine actinobacterium PHSC20C1
Length = 757
Score = 79.8 bits (188), Expect = 3e-14
Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
E SF + + + + + ++ P PIQAATIP L GKDV + P
Sbjct: 370 EGKSFLDLGIGSNISRQLASMGAESPFPIQAATIPDVLAGKDVLGRGKTGSGKTIAFGAP 429
Query: 239 ILERLLYKAKGGDRVT----RVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVK 406
++ERL+ G DR R LIL PTREL Q+ + +++ + VGG+
Sbjct: 430 LVERLMENNGGKDRQMGRKPRALILAPTRELAQQIDRTIQPIARSVGLFTTTIVGGVPQY 489
Query: 407 YQESVLRRNPDIVIATPGRLIDHI 478
Q + L R D++IATPGR+ D I
Sbjct: 490 KQVAALTRGVDVIIATPGRVEDLI 513
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 79.8 bits (188), Expect = 3e-14
Identities = 52/146 (35%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
+E +F +S LL+AIG + + PTPIQA IP L GKDV + +
Sbjct: 2 EETKTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGI 61
Query: 236 PILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSV----GGLDV 403
PI+ERL ++ + L+L PTREL Q + S+ GL+V GG +
Sbjct: 62 PIIERL----DPDNKNVQALVLSPTRELAIQ---TAEEFSRLMKYKKGLNVVPIYGGQPI 114
Query: 404 KYQESVLRRNPDIVIATPGRLIDHIR 481
+ Q L+ +VI TPGR+IDHI+
Sbjct: 115 ERQLRALKGTVQVVIGTPGRVIDHIK 140
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 79.4 bits (187), Expect = 5e-14
Identities = 51/143 (35%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
+ + F + L LL+AI Y P+PIQ +IP L GKDV + L
Sbjct: 3 ESSTGFASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTL 62
Query: 236 PILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQF-TTVTVGLSVGGLDVKYQ 412
P+L R + R +VL+L PTREL QV S+ + V V GG D Q
Sbjct: 63 PLLAR----TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQ 118
Query: 413 ESVLRRNPDIVIATPGRLIDHIR 481
L++ P V+ TPGR++DHIR
Sbjct: 119 FRALKQGPQWVVGTPGRVMDHIR 141
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 79.4 bits (187), Expect = 5e-14
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 1/152 (0%)
Frame = +2
Query: 29 DFFEEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXX 208
D P + SF + L +L+A+ A+ Y P+PIQA +IP L G +
Sbjct: 12 DTLRIPSTFMSELSFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTG 71
Query: 209 XXXXXXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQV-HTVTRQLSQFTTVTVGLS 385
+ LP+L R+ ++L+L PTREL QV T S+F V
Sbjct: 72 TGKTAAFALPLLSRI----DANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPI 127
Query: 386 VGGLDVKYQESVLRRNPDIVIATPGRLIDHIR 481
GG D Q L+R +++ TPGR++DH+R
Sbjct: 128 YGGQDFSPQIRGLKRGAQVIVGTPGRMLDHLR 159
>UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_154_39979_41331 - Giardia lamblia
ATCC 50803
Length = 450
Score = 79.4 bits (187), Expect = 5e-14
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = +2
Query: 98 LLKAIGALNYVHPTPIQAATIPVALLGK--DVXXXXXXXXXXXXXYMLPILERLLYKAKG 271
LL A+ + ++ PT IQ + V K DV + +P L+ LL +
Sbjct: 12 LLDALERIGWLEPTAIQKEMLTVVSHNKACDVVGVAETGSGKTGAFAIPALQDLLERGTN 71
Query: 272 GDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPDIVIA 451
V V +L PTREL Q +V R L + + GL +GG+D+ Q L + P ++I
Sbjct: 72 VKGVHTV-VLSPTRELAVQTFSVFRDLGKDFGLRTGLVIGGVDLMQQRKTLAQQPHVLIC 130
Query: 452 TPGRLIDHIRNTPSFGLHAIEVL 520
TPGRL+DH+ T F L ++ L
Sbjct: 131 TPGRLVDHLATTEGFSLKSLRFL 153
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 79.4 bits (187), Expect = 5e-14
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + L + L+ I A N+ PT IQ+ +P L G++V Y+ P+L
Sbjct: 189 SFGHLQLDQKLVNKIVAQNFEKPTAIQSQALPCVLSGRNVIGVAKTGSGKTIAYVWPMLV 248
Query: 248 RLLYKAKGGDRVTRV-LILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVL 424
+ + + + L++VPTRELG QV+ T++ +Q ++V +GG + +Q L
Sbjct: 249 HVSAQRAVEKKEGPIGLVVVPTRELGQQVYLETKKYAQLFQISVSALLGGENKHHQWKEL 308
Query: 425 RRNPDIVIATPGRLIDHIR 481
R DI+IATPGRLI+ ++
Sbjct: 309 RAGVDIIIATPGRLIEMVK 327
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 79.4 bits (187), Expect = 5e-14
Identities = 45/136 (33%), Positives = 69/136 (50%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F NL L+++I Y PT +Q+ IP+AL G D+ Y++PI+
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
K KG R LIL+PTREL QV V+ L + + + + GG+ + Q ++ R
Sbjct: 64 TA-KEKG----IRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILR 118
Query: 431 NPDIVIATPGRLIDHI 478
+I++ TPGR +D I
Sbjct: 119 GANIIVGTPGRTLDLI 134
>UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX10 - Homo sapiens (Human)
Length = 875
Score = 79.4 bits (187), Expect = 5e-14
Identities = 51/155 (32%), Positives = 77/155 (49%)
Frame = +2
Query: 56 DENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYML 235
+E F LS+ LK + Y T IQ TI +AL GKDV +++
Sbjct: 66 NEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLV 125
Query: 236 PILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQE 415
P+LE L VLI+ PTREL Q V R++ + + GL +GG D+K++
Sbjct: 126 PVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEA 185
Query: 416 SVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+ N +I++ TPGRL+ H+ T SF +++L
Sbjct: 186 ERI-NNINILVCTPGRLLQHMDETVSFHATDLQML 219
>UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DBP4 - Encephalitozoon cuniculi
Length = 452
Score = 79.4 bits (187), Expect = 5e-14
Identities = 41/151 (27%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + + + + K + +V +Q IP+AL G D+ +++P L+R
Sbjct: 6 FEDLKIDQRIEKGLRENGFVSMKEVQQKVIPMALEGHDIIGSSQTGTGKTLAFLVPTLQR 65
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
L+ GG L++ PTREL Q+ V +++++T ++ GL +GGL+ ++ +L+
Sbjct: 66 LVSLGWGGGDGLGCLVITPTRELALQIFDVLSRIAKYTVLSTGLIMGGLEA--EDELLKV 123
Query: 431 NP-DIVIATPGRLIDHIRNTPSFGLHAIEVL 520
N +I++ TPGRL+ H++ P +++L
Sbjct: 124 NQMNILVCTPGRLLQHLQENPYLSTANVQIL 154
>UniRef50_UPI0000ECBDA5 Cluster: ATP-dependent RNA helicase DDX24
(EC 3.6.1.-) (DEAD box protein 24).; n=2; Gallus
gallus|Rep: ATP-dependent RNA helicase DDX24 (EC
3.6.1.-) (DEAD box protein 24). - Gallus gallus
Length = 625
Score = 79.0 bits (186), Expect = 6e-14
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Frame = +2
Query: 92 RPLLKAIGALNYVHPTPIQAATIPVALLGK-DVXXXXXXXXXXXXXYMLPILERLLYKAK 268
+P+LKA+ +L + PTPIQA T+P A+ D+ + +P++ +L +
Sbjct: 91 QPVLKALSSLGFSAPTPIQALTLPSAIRDNMDILGAAETGSGKTLAFAIPMIHSVLEWQQ 150
Query: 269 GGDRVTRV----------LILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
++ V L+L PTREL QV +++FT + + VGG+ + QE
Sbjct: 151 SNNKEHTVGLHKKRPLLGLVLTPTRELAVQVKHHIDAVAKFTGIKTAILVGGMAAQKQER 210
Query: 419 VLRRNPDIVIATPGRLIDHIR 481
VL R P+IVIATPGRL + I+
Sbjct: 211 VLNRKPEIVIATPGRLWELIK 231
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 79.0 bits (186), Expect = 6e-14
Identities = 50/139 (35%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + +S + TPIQ IPV L GKD+ ++LPILE
Sbjct: 6 NFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILE 65
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHT-VTRQLSQFTTVTVGLSVGGLDVKYQESVL 424
++ + D + LI+ PTREL Q+ T + + L Q + V GG DV Q L
Sbjct: 66 KI--DPESSD--VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKL 121
Query: 425 RRNPDIVIATPGRLIDHIR 481
+ N IV+ATPGRL+DHIR
Sbjct: 122 KGNTHIVVATPGRLLDHIR 140
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 79.0 bits (186), Expect = 6e-14
Identities = 44/142 (30%), Positives = 70/142 (49%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
+ F + L +LK I + P+P+Q+ +IP+ L GKD+ + +P
Sbjct: 43 DTQGFDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIP 102
Query: 239 ILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQES 418
IL L ++ LI+ PTREL Q+ +L +F + GG +K Q
Sbjct: 103 ILNTL-----NRNKDIEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSIKRQCD 157
Query: 419 VLRRNPDIVIATPGRLIDHIRN 484
+L + P +IATPGRL+DH++N
Sbjct: 158 LLEKKPKAMIATPGRLLDHLQN 179
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 79.0 bits (186), Expect = 6e-14
Identities = 49/148 (33%), Positives = 76/148 (51%)
Frame = +2
Query: 38 EEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXX 217
E PP D SF ++LS + +A+ + P+PIQAA IP AL GKDV
Sbjct: 38 ETPPEMD---SFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGK 94
Query: 218 XXXYMLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGL 397
+ +PILE+L + R + +++VPTREL QV +L++ + + GG
Sbjct: 95 TAAFSIPILEQL--DSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGK 152
Query: 398 DVKYQESVLRRNPDIVIATPGRLIDHIR 481
++ Q L +V+ TPGR+ DH++
Sbjct: 153 NMNRQLRQLENGTQLVVGTPGRVHDHLQ 180
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 79.0 bits (186), Expect = 6e-14
Identities = 51/152 (33%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + L L + L Y TP+QAAT+P L G DV + + +L+
Sbjct: 5 SFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGLLD 64
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFT-TVTVGLSVGGLDVKYQESVL 424
R++ D T+ L+L PTREL QV R+L++F + + GG + Q L
Sbjct: 65 RIVV----SDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSL 120
Query: 425 RRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
P IV+ TPGR+ DH+R S L +++VL
Sbjct: 121 VHAPHIVVGTPGRIQDHLRK-QSLALDSLKVL 151
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 79.0 bits (186), Expect = 6e-14
Identities = 49/132 (37%), Positives = 66/132 (50%)
Frame = +2
Query: 86 LSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLYKA 265
L +L+A+ PTPIQAA +P+AL GKD+ + LPI ERL
Sbjct: 8 LKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQ 67
Query: 266 KGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPDIV 445
+ G R R L+L PTREL QV + ++ V GG Q+ L R D V
Sbjct: 68 ERG-RKPRALVLTPTRELALQVASELTAVAPHLKVVA--VYGGTGYGKQKEALLRGADAV 124
Query: 446 IATPGRLIDHIR 481
+ATPGR +D++R
Sbjct: 125 VATPGRALDYLR 136
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 79.0 bits (186), Expect = 6e-14
Identities = 53/163 (32%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
Frame = +2
Query: 38 EEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXX 217
+E PP + F + L + I + + TPIQA T+P L G+D+
Sbjct: 116 KEVPPAEGKTRFLDLPLHEDVQFGIQHAGFEYCTPIQALTLPALLEGRDLAGKAQTGTGK 175
Query: 218 XXXYMLPILERLLYKAKGGDR--VTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVG 391
++L + RLL + R L+L PTREL Q+ L FT +T + G
Sbjct: 176 TAAFLLAVFTRLLNHPLEERKPGCPRALVLAPTRELAMQIQKDAEVLEIFTGLTSVVVFG 235
Query: 392 GLDVKYQESVLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
G+D + Q L + D+VI TPGR+ID+ R S L +EVL
Sbjct: 236 GMDHEKQRRSLEQPVDLVIGTPGRIIDYSRG-GSLKLSKVEVL 277
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 79.0 bits (186), Expect = 6e-14
Identities = 56/157 (35%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Frame = +2
Query: 50 PYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXY 229
P + + F + L L + + +L Y TPIQA TIP+ L G+DV +
Sbjct: 4 PDTQPSRFNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAF 63
Query: 230 MLPILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSV-GGLDVK 406
LPIL + K R + L+L PTREL QV R + LS+ GG D++
Sbjct: 64 ALPILANIDVKV----RSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMR 119
Query: 407 YQESVLRRNPDIVIATPGRLIDHI--RNTPSFGLHAI 511
Q LR IV+ATPGRL+DHI R+ G++A+
Sbjct: 120 QQLKSLREGTHIVVATPGRLLDHIERRSIDLTGINAV 156
>UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1;
Guillardia theta|Rep: Putative RNA-dependent helicase -
Guillardia theta (Cryptomonas phi)
Length = 469
Score = 79.0 bits (186), Expect = 6e-14
Identities = 42/151 (27%), Positives = 72/151 (47%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
+F + LS+ + I ++ H T IQ+ +IP + G D+ +++P +E
Sbjct: 33 TFEVFKLSKMTIFKILENSFTHLTKIQSVSIPFQICGFDIIGSSSTGSGKTLAFLIPSIE 92
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
L T ++I+ PTREL Q + + + S GL +GG + K + +
Sbjct: 93 FLHTTKWKSSLGTAIIIISPTRELAVQTYYIFKDFSTIHQYRYGLMIGGSNKKSETEKVS 152
Query: 428 RNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
DI I TPGRL+DH+ +F H +++L
Sbjct: 153 TGLDIAICTPGRLLDHLNTNKNFKFHNLQIL 183
>UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 783
Score = 79.0 bits (186), Expect = 6e-14
Identities = 54/144 (37%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIG-ALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPIL 244
+F ++ L R L A+ L Y P+ IQ TIP L G+DV Y+ P++
Sbjct: 23 AFGLLGLDRTLCYALEHKLRYKQPSTIQRRTIPAVLQGRDVVCIARTGSGKTAAYLAPVV 82
Query: 245 ERLLYKAKGGDRVT--RVLILVPTRELGAQVHTVTRQLSQFTTVTVGLS----VGGLDVK 406
+ L +G R R LIL+PTREL QV +V ++ FT L +GG V+
Sbjct: 83 QLL----EGHSRTVGVRCLILLPTRELALQVSSVLKKFIAFTKRDDALRSATLIGGESVE 138
Query: 407 YQESVLRRNPDIVIATPGRLIDHI 478
Q L NPD+V+ATPGRL HI
Sbjct: 139 GQFGALTFNPDLVVATPGRLSQHI 162
>UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG8611-PA, isoform A - Tribolium castaneum
Length = 624
Score = 78.6 bits (185), Expect = 8e-14
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + + + L+ + ++V+ T +Q IP L GK+V Y LPI+
Sbjct: 131 FSDLQIHKYLVANLQKHSFVNLTNVQERAIPEILAGKNVLIRSQTGSGKTLAYALPIMNA 190
Query: 251 LLYKAKGGDRVTRV--LILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVL 424
LL R V +I+VPTREL Q H + +++ F + +G GG + K ++ L
Sbjct: 191 LLSVEPRLQRQDGVQAIIVVPTRELALQTHEIFGKINTFQWLVIGHLCGGENRKTEKDKL 250
Query: 425 RRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
R+ +VI TPGRL+DHI +T +F ++ L
Sbjct: 251 RKGVHVVIGTPGRLLDHILHTSAFKTENVKCL 282
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 78.6 bits (185), Expect = 8e-14
Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF + LS + +L Y PT IQ IP L G D+ ++LP+LE
Sbjct: 2 SFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLLE 61
Query: 248 RLLYKAKGGDRVTRVLILVPTRELGAQV-HTVTRQLSQFTTVTVGLSV-GGLDVKYQESV 421
+L G+ +T L+LVPTREL QV +V R +++ GG + Q
Sbjct: 62 KLHSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQMQS 121
Query: 422 LRRNPDIVIATPGRLIDHIR 481
L + DIV+ATPGRL+D +R
Sbjct: 122 LSKGCDIVVATPGRLLDLMR 141
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 78.6 bits (185), Expect = 8e-14
Identities = 43/137 (31%), Positives = 70/137 (51%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + +S + + + PTP+Q IP L +DV ++LPILER
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
+ + + LI+ PTREL Q+ T++L++ + + + GG DV+ Q L+
Sbjct: 65 VNVEKP----TIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKLKG 120
Query: 431 NPDIVIATPGRLIDHIR 481
+ I+I TPGRL+DH+R
Sbjct: 121 SIHIIIGTPGRLLDHLR 137
>UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP8 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 619
Score = 78.6 bits (185), Expect = 8e-14
Identities = 46/141 (32%), Positives = 70/141 (49%)
Frame = +2
Query: 62 NASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPI 241
+ +F + LS PL+ A+ ++N PT IQAA + L G+D + LPI
Sbjct: 151 DVTFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPI 210
Query: 242 LERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESV 421
+ER+ G ++L PTREL Q+ + + +T VGG+D+ Q
Sbjct: 211 VERIARDPFG----VWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMDMMKQAQE 266
Query: 422 LRRNPDIVIATPGRLIDHIRN 484
L P I++ATPGRL D +R+
Sbjct: 267 LEARPHIIVATPGRLCDLLRS 287
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 78.2 bits (184), Expect = 1e-13
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Frame = +2
Query: 62 NASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPI 241
N F + + KA+ LN++ TPIQA IP + G DV + +PI
Sbjct: 2 NTLFEQLPILEQTKKALKELNFIDATPIQALVIPEIIKGHDVIGQAQTGTGKTFAFGIPI 61
Query: 242 LERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQF-TTVTVGLSVGGLDVKYQES 418
+E++ K + T+ LIL PTREL QV+ ++L +F + + + GG Q
Sbjct: 62 IEKIEPKI----QKTQSLILCPTRELTLQVYEELKKLLRFYQEIRIAVVYGGESYTKQFR 117
Query: 419 VLRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
L P ++IATPGR IDH+ L A+++L
Sbjct: 118 ALEAKPHLIIATPGRAIDHLER-GKIDLSALKIL 150
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 78.2 bits (184), Expect = 1e-13
Identities = 51/148 (34%), Positives = 70/148 (47%), Gaps = 10/148 (6%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF ++L L+ + L Y PTPIQ IPV L GKDV + LP+L
Sbjct: 2 SFADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLLH 61
Query: 248 RLLYKAKG----------GDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGL 397
+LL L+LVPTREL QVH+ Q + ++VT + GG+
Sbjct: 62 QLLTHQDNLAAQPDTQHINSTPITALVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGGV 121
Query: 398 DVKYQESVLRRNPDIVIATPGRLIDHIR 481
+ Q L I++ATPGRL+D +R
Sbjct: 122 SIGEQIRQLANGTHILVATPGRLLDLLR 149
>UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 533
Score = 78.2 bits (184), Expect = 1e-13
Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 4/176 (2%)
Frame = +2
Query: 5 EATIEYDSDFFEEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKD 184
EA +D D F+ P + F+ ++L P+L+ I + + TPIQAA +P L G D
Sbjct: 97 EAAEPWDIDQFQVDPE-EGKTRFHDLDLPAPILRGIADAEFRYCTPIQAALLPHTLNGLD 155
Query: 185 VXXXXXXXXXXXXXYMLPILERLLYK-AKGGDR--VTRVLILVPTRELGAQVHTVTRQLS 355
+++ +L + L A G R R L+L PTREL Q+ T LS
Sbjct: 156 AAGRAQTGTGKTAVFIITMLTQFLRNPAPEGRRKGTPRALVLAPTRELALQIEKETHLLS 215
Query: 356 QFTTVTVGLSVGGLDVKYQESVLRRNP-DIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+ T GG+D + Q+ L DIV+ATPGRL+D + L +E+L
Sbjct: 216 RHTPFKSVAIFGGMDYEKQKRRLTGEVIDIVVATPGRLLD-FKRQGDLHLSKVEIL 270
>UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/DEXH
helicase DDX31; n=2; Dictyostelium discoideum|Rep:
Similar to Homo sapiens (Human). DEAD/DEXH helicase
DDX31 - Dictyostelium discoideum (Slime mold)
Length = 908
Score = 78.2 bits (184), Expect = 1e-13
Identities = 42/141 (29%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Frame = +2
Query: 80 MNLSRPLLK-AIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLL 256
+ LS L++ +G + + PT IQ A+I L G D Y++P++++L
Sbjct: 212 LQLSETLVRNLVGHMKHEKPTHIQEASITPILKGNDALVKAQTGSGKTLSYLIPVVQKLT 271
Query: 257 YKAKGGDRVTRVLILVPTRELGAQVHT-VTRQLSQFTTVTVGLSVGGLDVKYQESVLRRN 433
+ +I+ PTREL +Q++ + + L F + G+ +GG + +++ +R+
Sbjct: 272 EQRVTRSDGCYCVIITPTRELSSQIYEELQKLLKPFYWIVPGIIMGGENRSAEKARIRKG 331
Query: 434 PDIVIATPGRLIDHIRNTPSF 496
+I++ATPGRL+DH++NT SF
Sbjct: 332 INILVATPGRLLDHLQNTQSF 352
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 78.2 bits (184), Expect = 1e-13
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Frame = +2
Query: 68 SFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILE 247
SF ++ +I L Y PT IQ +P+AL G+D+ ++ P L
Sbjct: 107 SFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALV 166
Query: 248 RLLYKAK--GGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESV 421
++ + + GD VLI PTREL Q++T R+ + + V GG + Q
Sbjct: 167 HIMDQPELQVGDGPI-VLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKA 225
Query: 422 LRRNPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
L+ +IV+ATPGRLIDH++ + LH + L
Sbjct: 226 LQEGAEIVVATPGRLIDHVK-AKATNLHRVTYL 257
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 77.8 bits (183), Expect = 1e-13
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + + +L+AI Y + TP+Q IP G+DV + LPIL++
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 251 LLYKAKGGDRVT-RVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLR 427
+ + R LIL PTREL AQV S+ ++V GG+ + Q L+
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQKLK 122
Query: 428 RNPDIVIATPGRLIDHI 478
+ DI++ATPGRL++HI
Sbjct: 123 QGADIIVATPGRLLEHI 139
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 77.8 bits (183), Expect = 1e-13
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Frame = +2
Query: 59 ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLP 238
E+ +F + L+ LLK + +L Y PTPIQ+ I L G DV + LP
Sbjct: 3 ESLTFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLP 62
Query: 239 ILERLLYKAKGGDRVTRVLILVPTRELGAQV----HTVTRQLSQFTTVTVGLSVGGLDVK 406
+L R+ + L+L PTREL QV T R + F + + GG D++
Sbjct: 63 LLSRI----DTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPI---YGGADMR 115
Query: 407 YQESVLRRNPDIVIATPGRLIDHIR 481
Q L++NP +++ TPGR++DH+R
Sbjct: 116 NQLRALKQNPQVIVGTPGRVMDHLR 140
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 77.8 bits (183), Expect = 1e-13
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Frame = +2
Query: 11 TIEYDSDFFEEPPPYD-ENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDV 187
TIE + + P++ E SF N+ +++++ HP PIQA T+PVAL G D+
Sbjct: 18 TIEPEETIISDEKPHEIEEKSFADYNVRADIVESLADAGITHPFPIQAMTLPVALAGHDI 77
Query: 188 XXXXXXXXXXXXXYMLPILERLLYKAKGG-DRVT-----RVLILVPTRELGAQVHTVTRQ 349
+ +P L+R++ + G D++ + L++VPTREL QV
Sbjct: 78 IGQAKTGTGKTLGFGIPALQRVVGRDDPGFDKLAVPGAPQALVIVPTRELAVQVAKDLEN 137
Query: 350 LSQFTTVTVGLSVGGLDVKYQESVLRRNPDIVIATPGRLID 472
++ + GG + Q L++ +IV+ TPGRLID
Sbjct: 138 AARKRNARIATIYGGRAYEPQVDSLQKGVEIVVGTPGRLID 178
>UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 560
Score = 77.8 bits (183), Expect = 1e-13
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 3/126 (2%)
Frame = +2
Query: 134 PTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERL--LYKAKGGDRVTRVLILVP 307
PT +QA TIP L G+DV Y+ P+ ++ + + TR L+LVP
Sbjct: 24 PTAVQAKTIPRLLAGRDVLVRAETGSGKTLSYIAPLYSKIGGITPRVTREEGTRGLVLVP 83
Query: 308 TRELGAQVHTVTRQLSQ-FTTVTVGLSVGGLDVKYQESVLRRNPDIVIATPGRLIDHIRN 484
TREL QV R++ + F V +GG + +++ LR+ ++IATPGRL+DH+R
Sbjct: 84 TRELATQVEDTARRVGRPFHWVVTSSIMGGENRAKEKARLRKGVSLLIATPGRLLDHLRM 143
Query: 485 TPSFGL 502
T SF +
Sbjct: 144 TESFNV 149
>UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 430
Score = 77.8 bits (183), Expect = 1e-13
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Frame = +2
Query: 98 LLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGD 277
+++A+ + + + TPIQA +P+ L G+DV ++ LL +
Sbjct: 20 VIEALESKGFHYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPANAE 79
Query: 278 RVT---RVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPDIVI 448
R T R LI+ PTREL Q+H+ LS T + +GL+ GG Q VL DI++
Sbjct: 80 RQTNQPRALIMAPTRELAVQIHSDAEALSHLTGLKLGLAYGGDGYDKQLKVLENGVDILV 139
Query: 449 ATPGRLIDHIRNTPSFGLHAIEVL 520
T GRLID+ + L AI+V+
Sbjct: 140 GTTGRLIDYAKQN-HINLGAIQVV 162
>UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 32; n=1; Arabidopsis thaliana|Rep: Probable
DEAD-box ATP-dependent RNA helicase 32 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 739
Score = 77.8 bits (183), Expect = 1e-13
Identities = 43/150 (28%), Positives = 74/150 (49%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F + +S + + YV T +Q+A IP AL G+D+ +++PILE+
Sbjct: 73 FAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEK 132
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
L + + +I+ PTREL AQ V ++ +F + GL +GG + E
Sbjct: 133 LHRERWSPEDGVGCIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERVH 192
Query: 431 NPDIVIATPGRLIDHIRNTPSFGLHAIEVL 520
+I++ PGRL+ H+ TP+F +++L
Sbjct: 193 EMNILVCAPGRLLQHMDETPNFECPQLQIL 222
>UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;
Coelomata|Rep: ATP-dependent RNA helicase DDX18 - Homo
sapiens (Human)
Length = 670
Score = 77.8 bits (183), Expect = 1e-13
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Frame = +2
Query: 59 ENASFYMM-NL-SRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYM 232
E+ SF + NL + LKAI + + + T IQ +I L G+D+ ++
Sbjct: 175 EDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFL 234
Query: 233 LPILERLLYKAKGGDRV-TRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKY 409
+P +E L+ K + R T VLIL PTREL Q V ++L T GL +GG +
Sbjct: 235 IPAVE-LIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSA 293
Query: 410 QESVLRRNPDIVIATPGRLIDHIRNTPSF 496
+ L +I++ATPGRL+DH++NTP F
Sbjct: 294 EAQKLGNGINIIVATPGRLLDHMQNTPGF 322
>UniRef50_Q4P7M1 Cluster: ATP-dependent RNA helicase DBP9; n=2;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP9 -
Ustilago maydis (Smut fungus)
Length = 686
Score = 77.8 bits (183), Expect = 1e-13
Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 8/137 (5%)
Frame = +2
Query: 98 LLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERLL------Y 259
LL+A+ L Y PTPIQ IP+AL GKD+ Y LP+L+++L
Sbjct: 70 LLRALADLGYGIPTPIQQKAIPLALAGKDILARARTGSGKTLAYGLPLLQKVLDAKSAVA 129
Query: 260 KAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDV--KYQESVLRRN 433
K+ ++TR L+LVPTREL QV + ++ + L + K Q +L
Sbjct: 130 KSDANHQLTRALVLVPTRELAEQVFRHLSVVIEYVRDDIRLVNVAREASEKVQRLLLSEK 189
Query: 434 PDIVIATPGRLIDHIRN 484
PD+VIATP + +++++N
Sbjct: 190 PDVVIATPSKALNYLQN 206
>UniRef50_UPI00015B6103 Cluster: PREDICTED: similar to CG8611-PB;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG8611-PB - Nasonia vitripennis
Length = 964
Score = 77.4 bits (182), Expect = 2e-13
Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Frame = +2
Query: 137 TPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILERL--LYKAKGGDRVTRVLILVPT 310
T +Q IPV L GKDV Y LPI+E L + D + L++VPT
Sbjct: 352 TTVQKKAIPVILSGKDVLVRSQTGSGKTLAYALPIIETLQRVRPKLARDSGIKALVVVPT 411
Query: 311 RELGAQVHTVTRQLSQ-FTTVTVGLSVGGLDVKYQESVLRRNPDIVIATPGRLIDHIRNT 487
REL Q + +L + FT + G VGG K +++ LR+ +++ATPGRL+DHI++T
Sbjct: 412 RELALQTYECFLKLVKPFTWIVPGYLVGGEKRKAEKARLRKGCTVLVATPGRLLDHIKHT 471
Query: 488 PSFGLHAI 511
+ L I
Sbjct: 472 QALRLDLI 479
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 77.4 bits (182), Expect = 2e-13
Identities = 43/134 (32%), Positives = 69/134 (51%)
Frame = +2
Query: 71 FYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXXXXXYMLPILER 250
F MN+ +LK++ + + PT IQ A +P A GKD+ + +PIL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 251 LLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRR 430
L +R+ L++ PTREL Q++ L ++T + L +GG+ + Q++ L
Sbjct: 63 LDCSI---NRIQH-LVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAALNS 118
Query: 431 NPDIVIATPGRLID 472
+IV+ATPGRL D
Sbjct: 119 GVNIVVATPGRLED 132
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,808,130
Number of Sequences: 1657284
Number of extensions: 10280908
Number of successful extensions: 28805
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 26939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27786
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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