Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_O03
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    72   4e-15
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   1.6  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    22   2.9  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.7  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 71.7 bits (168), Expect = 4e-15
 Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 6/159 (3%)
 Frame = +2

Query: 38  EEPPPYDENASFYMMNLSRPLLKAIGALNYVHPTPIQAATIPVALLGKDVXXXXXXXXXX 217
           + PPP     SF    L   LL+ +    Y  PT IQ   IPV L G+D+          
Sbjct: 152 DAPPPI---TSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTGSGK 208

Query: 218 XXXYMLPILERLLYKAKGGDRVTR-----VLILVPTRELGAQVHTVTRQLSQFTTVTVGL 382
              +MLPI+  LL      +         V+I+ PTREL  Q+    ++ +  +TV V +
Sbjct: 209 TAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQGKKFAYNSTVKVAV 268

Query: 383 SVGGLDVKYQESVLRRNPDIVIATPGRLIDHI-RNTPSF 496
             GG    +Q   +     I++ATPGRL D + R   SF
Sbjct: 269 IYGGTSTNHQRGRILGGCHILVATPGRLKDFVNRGNVSF 307


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 346 TTVTVYNSHCWFVRRW 393
           TTVT++ S  W V +W
Sbjct: 94  TTVTIFKSAFWDVDKW 109


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +2

Query: 239 ILERLLYKAKGGDRVTRVLILVPTRELGAQVHTVTRQLSQFTTVTVGLSV 388
           +LE+L+ +  GG     +LIL P  ++    HTV   L    T  +G S+
Sbjct: 103 LLEQLVCEQLGGF----LLILTPNGKIVFVSHTVEHLLGHLQTDLMGQSI 148


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 349 LSRNCMYLSPEFPRRYQYENPSDAVPALR 263
           +S +C+YL+   P+R +  +  D  P  R
Sbjct: 9   ISEDCLYLNIWVPQRLRIRHHGDKPPQER 37


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = +2

Query: 14  IEYDSDFFEEPPPYD 58
           + YD +++ +P  YD
Sbjct: 396 LHYDPEYYPDPEKYD 410


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,864
Number of Sequences: 336
Number of extensions: 2567
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)