Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_O02
         (299 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.20 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   0.20 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   0.81 
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    22   1.4  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   1.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   2.5  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.20
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 198 QIVEMAENDDYLDSIDNNHLDGTNGSLNMTDNSL 299
           +++E+ E+  Y   IDN  LD  +G   +T NSL
Sbjct: 529 KLIEIPEDLKYFYEIDNWMLDLNSGLNKITRNSL 562


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.20
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 198 QIVEMAENDDYLDSIDNNHLDGTNGSLNMTDNSL 299
           +++E+ E+  Y   IDN  LD  +G   +T NSL
Sbjct: 529 KLIEIPEDLKYFYEIDNWMLDLNSGLNKITRNSL 562


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 0.81
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = +3

Query: 162 SVYNQV---PNSCFRQIVEMAENDDYLDSIDNNHLDGTNGSLNMTD 290
           S+Y+ +   P S FRQ  +   +     S DN  L G     NMT+
Sbjct: 380 SIYSSLLRYPRSIFRQTDDHQNSPSIFISDDNQKLTGIVQISNMTE 425


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 10  NSARGSDKYYNVNRSTLEYINTDFV 84
           NS   S+ YYN N     Y N +++
Sbjct: 309 NSCNYSNNYYNNNNYKKLYYNINYI 333


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 210 MAENDDYLDSIDNNHLDGTNG 272
           +A ND+ L+SI     DGT G
Sbjct: 177 LATNDNILESISYVKDDGTEG 197


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 13   SARGSDKYYNVNRSTLEY 66
            S   +  YY V  STLEY
Sbjct: 1061 SVHRAGSYYGVPHSTLEY 1078


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,633
Number of Sequences: 438
Number of extensions: 1617
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6244050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)