Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_O01
         (622 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   336   4e-94
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           27   0.64 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   1.5  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    24   4.5  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           24   4.5  
EF426175-1|ABO26418.1|  155|Anopheles gambiae unknown protein.         23   7.8  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    23   7.8  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   7.8  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  336 bits (825), Expect = 4e-94
 Identities = 150/187 (80%), Positives = 165/187 (88%)
 Frame = +3

Query: 60  MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 239
           MGFVKVVKNKQYFKRYQV+F+RRREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+
Sbjct: 1   MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60

Query: 240 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 419
           TCQ+AY RIEGD IVCAAYSHELPRYG+KVGLTNYAAAYCTG             D+LY 
Sbjct: 61  TCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYA 120

Query: 420 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 599
           G T+VTG+EY VEPVD GP AFRCYLDVGLARTTTG+RVFGAMKGAVDGGLN+PHS+KRF
Sbjct: 121 GCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGSRVFGAMKGAVDGGLNIPHSVKRF 180

Query: 600 PGYDAES 620
           PGY AE+
Sbjct: 181 PGYSAEN 187


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
 Frame = -1

Query: 595 LLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK*HLN-------APGPLSTGSTLYSSP 437
           L +  G   PP+T    A  T AP      PT+   +        APG  +T +T+ S P
Sbjct: 15  LAVTSGQIDPPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTT-TTVASGP 73

Query: 436 VTSVAPV*RLSKPSLCNNLLASNRPV 359
           VT+       +  S   ++ A+  PV
Sbjct: 74  VTTTGSTDTTTPSSAPQDVKAALVPV 99


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +3

Query: 420  GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK--GAVDGGLNVP 581
            G T+ +GD+  ++  DNG G      +       TG+   G+    G++ GG   P
Sbjct: 2011 GGTDASGDDLEIDACDNGCGGGNGNENDDSGDGATGSGDNGSQHGGGSISGGGGTP 2066


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 217 TISRYFGVLYLFLSWTTRRL 158
           TI RYF + + FLS T  +L
Sbjct: 141 TIERYFAICHPFLSHTMSKL 160


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -1

Query: 595 LLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTS 497
           L +  G   PP+T    A  T AP      PT+
Sbjct: 15  LAVTSGQIDPPTTTVAPATTTVAPTTTTVAPTT 47


>EF426175-1|ABO26418.1|  155|Anopheles gambiae unknown protein.
          Length = 155

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 225 ITVQSVGTLECCICFYPGQRGVCEHSSQ 142
           +  QSV  L C  C  P     C+ S+Q
Sbjct: 19  LLAQSVSALRCYQCASPSSWSDCQASAQ 46


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = -1

Query: 565 PSTAPFMAPNTRAPVV-VRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 419
           P  A  +A     P+V V  +P+S    +  G +S  +  + +P  S+AP
Sbjct: 114 PRDASKIAARLIIPIVPVTVRPSSPKPNSRKGKISNANDKHVAPALSIAP 163


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -3

Query: 371 QQTSAVGSSIVSQTHLDTIAWEFM 300
           ++ SA+  + VSQ+ ++T  WE +
Sbjct: 170 ERKSAIDLTFVSQSLMETTGWEVL 193


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,270
Number of Sequences: 2352
Number of extensions: 14622
Number of successful extensions: 74
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)