Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_N24
         (366 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21323-12|AAA62554.2|  354|Caenorhabditis elegans Hypothetical p...    31   0.25 
Z69794-4|CAA93678.3|  654|Caenorhabditis elegans Hypothetical pr...    28   2.4  
Z83112-2|CAB05539.1|  391|Caenorhabditis elegans Hypothetical pr...    27   3.1  
AF125964-4|ABA03109.1|  414|Caenorhabditis elegans Hypothetical ...    27   3.1  
AF047655-3|ABD63244.1|  414|Caenorhabditis elegans Hypothetical ...    27   3.1  
AF025465-11|AAB71024.1|  411|Caenorhabditis elegans Hypothetical...    27   3.1  
AF016422-3|AAG24173.1|  411|Caenorhabditis elegans Hypothetical ...    27   3.1  
AC024831-4|ABD63212.1|  355|Caenorhabditis elegans Hypothetical ...    27   3.1  
AF036703-4|AAB88555.1|  261|Caenorhabditis elegans Hypothetical ...    27   5.4  
Z73098-12|CAA97339.1|  452|Caenorhabditis elegans Hypothetical p...    26   9.5  
U97002-8|AAB52265.2|  166|Caenorhabditis elegans Hypothetical pr...    26   9.5  
U41279-1|AAQ81282.1|   78|Caenorhabditis elegans Insulin related...    26   9.5  

>U21323-12|AAA62554.2|  354|Caenorhabditis elegans Hypothetical
           protein C45G9.11 protein.
          Length = 354

 Score = 31.1 bits (67), Expect = 0.25
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = -3

Query: 355 VYGLSFCWCFFTFGLRYFF--FSFWSRIGFLFLFRNGMLCFSGFCVSYRSRLSNQFLFFI 182
           V  + + +C F+F + +FF  FS WS +    L    + C   FC  Y+  L N + FF+
Sbjct: 276 VLHIHYIFCIFSFFINFFFLIFSIWSLVSPGSLTFTPINCLLIFCFLYQLPL-NIWGFFV 334

Query: 181 SDRLRN 164
               R+
Sbjct: 335 VKSCRD 340


>Z69794-4|CAA93678.3|  654|Caenorhabditis elegans Hypothetical
           protein R03G8.3 protein.
          Length = 654

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 241 FSGFCVSYRSRLSNQFLFFISDR-LRNSHSRK 149
           F  F + +R +L N F+FF+ D  LR  + RK
Sbjct: 394 FHKFLIKHREQLDNSFVFFMGDHGLRFGNVRK 425


>Z83112-2|CAB05539.1|  391|Caenorhabditis elegans Hypothetical
           protein K02B7.2 protein.
          Length = 391

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +2

Query: 143 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 241
           M+F    +AK  P+ +EK +LV +PT     +TTE
Sbjct: 37  MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 71


>AF125964-4|ABA03109.1|  414|Caenorhabditis elegans Hypothetical
           protein W03G1.3 protein.
          Length = 414

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +2

Query: 143 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 241
           M+F    +AK  P+ +EK +LV +PT     +TTE
Sbjct: 1   MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 35


>AF047655-3|ABD63244.1|  414|Caenorhabditis elegans Hypothetical
           protein C17B7.13 protein.
          Length = 414

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +2

Query: 143 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 241
           M+F    +AK  P+ +EK +LV +PT     +TTE
Sbjct: 1   MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 35


>AF025465-11|AAB71024.1|  411|Caenorhabditis elegans Hypothetical
           protein K02E7.2 protein.
          Length = 411

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +2

Query: 143 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 241
           M+F    +AK  P+ +EK +LV +PT     +TTE
Sbjct: 1   MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 35


>AF016422-3|AAG24173.1|  411|Caenorhabditis elegans Hypothetical
           protein R09E12.5 protein.
          Length = 411

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +2

Query: 143 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 241
           M+F    +AK  P+ +EK +LV +PT     +TTE
Sbjct: 1   MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 35


>AC024831-4|ABD63212.1|  355|Caenorhabditis elegans Hypothetical
           protein Y55F3C.11 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +2

Query: 143 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 241
           M+F    +AK  P+ +EK +LV +PT     +TTE
Sbjct: 1   MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 35


>AF036703-4|AAB88555.1|  261|Caenorhabditis elegans Hypothetical
           protein T11F8.1 protein.
          Length = 261

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 298 FSFWSRIGFLFLFRNGMLCFSGFCVSYRSRLSNQFLFFISD 176
           F +  RIG   +F+N +L    F     S L+  F FF+S+
Sbjct: 78  FKWHYRIGTYGIFQNNLLALLIFYNFQNSPLTTYFAFFVSN 118


>Z73098-12|CAA97339.1|  452|Caenorhabditis elegans Hypothetical
           protein T21C9.12 protein.
          Length = 452

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -3

Query: 286 SRIGFLFLFRNGMLCFSGFCVSYRSRLSNQFLFFISDRLRNS 161
           +RIG   LF   ++ F  FC  Y     ++F   ISD    S
Sbjct: 166 TRIGAYVLFGGSIIGFISFCFYYGRAQRDEFGNVISDEFSGS 207


>U97002-8|AAB52265.2|  166|Caenorhabditis elegans Hypothetical
           protein K09H11.6 protein.
          Length = 166

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -3

Query: 328 FFTFGL-RYFFFSFWSRIGFLFLF 260
           FF + + R  F+S WS +GF F+F
Sbjct: 108 FFLYVVTRATFYSVWSDLGFFFVF 131


>U41279-1|AAQ81282.1|   78|Caenorhabditis elegans Insulin related
           protein 38 protein.
          Length = 78

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 131 LLFCMAFAAVTIAKPVADEKQE 196
           LL C+AFA +T+     DEK +
Sbjct: 5   LLVCIAFAIITVTSFTPDEKSQ 26


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,581,789
Number of Sequences: 27780
Number of extensions: 112901
Number of successful extensions: 265
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)