Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_N24
         (366 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   2.6  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   2.6  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   2.6  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          21   4.6  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   6.0  

>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -3

Query: 241 FSGFCVSYRSRLSNQFLFFISD 176
           +SG+ +++   L N+ ++FI D
Sbjct: 205 YSGWYLNHDYNLENKLIYFIED 226


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +2

Query: 59  VSVTVNFFITSN---PTSQDLNFTMKVLLFCMAFAAVTIAKPVA 181
           +S+TV F + +    PTS  +    K LLF M    +++   +A
Sbjct: 276 LSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMVLVTLSVVVTIA 319


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 152 AAVTIAKPVADEKQELVAQPTSVADTKT 235
           AA+ IAK + +EK+ ++  P  + +  T
Sbjct: 314 AALKIAKDIPEEKRMVIILPDGIRNYLT 341


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 108 SCDVGFEVMKKLTVTDTQVLF 46
           SC V +EV   +T +DT + F
Sbjct: 48  SCSVSWEVHDPVTNSDTYIGF 68


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 47  NKTCVSVTVNFFITSN 94
           NK C ++T+N   TSN
Sbjct: 108 NKYCGNITLNIESTSN 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,994
Number of Sequences: 438
Number of extensions: 1222
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)