Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_N23
         (341 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   1.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   3.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   4.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   6.1  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = -1

Query: 140 TLMRLPTISAGNTRSSNMASYTEVSVLERGLFC-LLATRVLWLGLPR 3
           TL     + A N          +++VLE G FC +   R L +G+ R
Sbjct: 527 TLSNTSLLGAANQLEELNLKNIDLTVLESGAFCKMQPLRTLKIGVYR 573


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 216 VNLVFNSCLLVF 181
           VNL+FN+C  VF
Sbjct: 64  VNLIFNTCGEVF 75


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 185 FLSRCTLMSCEPSSFTLM 132
           FLSRC L+S   + +TL+
Sbjct: 679 FLSRCRLLSERLTRWTLI 696


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 142 KLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKK 240
           K+D +Q+     D+   TT+   V+  Q   KK
Sbjct: 424 KVDPTQVESEEEDEETSTTVFSNVEVVQEEAKK 456


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,363
Number of Sequences: 336
Number of extensions: 1693
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6664455
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)