Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_N19
         (572 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00004DBC97 Cluster: UPI00004DBC97 related cluster; n...    36   0.51 
UniRef50_Q6ZR84 Cluster: CDNA FLJ46559 fis, clone THYMU3040126; ...    36   0.89 
UniRef50_A6NDX2 Cluster: Uncharacterized protein ENSP00000295251...    34   2.7  
UniRef50_UPI0000DBEF8D Cluster: UPI0000DBEF8D related cluster; n...    33   3.6  
UniRef50_Q6ZQV8 Cluster: CDNA FLJ46861 fis, clone UTERU3011092; ...    33   3.6  
UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;...    33   4.8  
UniRef50_O25793 Cluster: Multidrug-efflux transporter; n=4; Heli...    33   4.8  
UniRef50_A7QMC2 Cluster: Chromosome undetermined scaffold_125, w...    33   4.8  
UniRef50_A3HS96 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  
UniRef50_Q6ZVA9 Cluster: CDNA FLJ42813 fis, clone BRCAN2012355; ...    33   6.3  
UniRef50_A6NHA2 Cluster: Uncharacterized protein ENSP00000355631...    33   6.3  
UniRef50_UPI0000DBFE1A Cluster: UPI0000DBFE1A related cluster; n...    32   8.3  
UniRef50_Q1X874 Cluster: Fanconi anemia A; n=1; Danio rerio|Rep:...    32   8.3  
UniRef50_Q7R9X9 Cluster: Putative uncharacterized protein PY0673...    32   8.3  
UniRef50_Q6ZSA2 Cluster: CDNA FLJ45698 fis, clone FEBRA2017811; ...    32   8.3  
UniRef50_A6NNQ8 Cluster: Uncharacterized protein ENSP00000371436...    32   8.3  

>UniRef50_UPI00004DBC97 Cluster: UPI00004DBC97 related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00004DBC97 UniRef100 entry -
           Xenopus tropicalis
          Length = 173

 Score = 36.3 bits (80), Expect = 0.51
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 464 IEVFVRTYAYMHAYASGYISLLSYTCVSVQMHTCLH 571
           +  +  T A++HAY   ++ L +YTC  + +H C H
Sbjct: 12  LHTYALTLAHLHAYTIAHLRLHTYTCKHLHIHACKH 47


>UniRef50_Q6ZR84 Cluster: CDNA FLJ46559 fis, clone THYMU3040126;
           n=1; Homo sapiens|Rep: CDNA FLJ46559 fis, clone
           THYMU3040126 - Homo sapiens (Human)
          Length = 303

 Score = 35.5 bits (78), Expect = 0.89
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 461 YIEVFVRTYAYMHAYASGYISLLSYTCVSVQMHTCLH 571
           ++ V V T+ Y+H Y   Y  + +YTCV V  H  +H
Sbjct: 120 HVCVCVHTHIYIHMYVCVYTRIYTYTCVCVCTHAYIH 156


>UniRef50_A6NDX2 Cluster: Uncharacterized protein ENSP00000295251;
           n=1; Homo sapiens|Rep: Uncharacterized protein
           ENSP00000295251 - Homo sapiens (Human)
          Length = 80

 Score = 33.9 bits (74), Expect = 2.7
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +2

Query: 461 YIEVFVRTYAYMHAYASGYISLLSYTCVSVQMHTCLH 571
           YI V++R Y YM  Y   Y+ L  YTC+ +  + C+H
Sbjct: 18  YICVYIRMYTYMCIYT--YV-LCMYTCMCIYTYVCIH 51


>UniRef50_UPI0000DBEF8D Cluster: UPI0000DBEF8D related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DBEF8D UniRef100 entry -
           Rattus norvegicus
          Length = 230

 Score = 33.5 bits (73), Expect = 3.6
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -3

Query: 564 HVCICTLTHVYDNRLMYPDAYA--CIYAYVRTKTSI 463
           +VCIC   ++Y +R +Y   Y   CI+ Y  T T I
Sbjct: 155 YVCICVYMYMYTHRYIYKQIYTNICIHTYTHTHTYI 190


>UniRef50_Q6ZQV8 Cluster: CDNA FLJ46861 fis, clone UTERU3011092;
           n=3; Homo sapiens|Rep: CDNA FLJ46861 fis, clone
           UTERU3011092 - Homo sapiens (Human)
          Length = 291

 Score = 33.5 bits (73), Expect = 3.6
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +2

Query: 461 YIEVFVRTYAYMHAYASGYISLLSYT--CVSVQMHTCLH 571
           +I   + TY Y+H +A  YI + SYT  C+ + +  C H
Sbjct: 92  FIYTHMHTYMYIHMHAYAYIYVYSYTRICIHICIFICTH 130


>UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;
           n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
           - Equus caballus
          Length = 187

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +2

Query: 461 YIEVFVRTYAYMHAYASGYISLLSYTCVSVQMHTCLH 571
           YI +++ TY Y H Y   Y+ +  Y+ + + M+T ++
Sbjct: 96  YIYIYIYTYIYTHIYICTYLYIYIYSFIYIYMYTYIY 132


>UniRef50_O25793 Cluster: Multidrug-efflux transporter; n=4;
           Helicobacter|Rep: Multidrug-efflux transporter -
           Helicobacter pylori (Campylobacter pylori)
          Length = 443

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = +1

Query: 370 GVALSGVLLY*ISKKLLFLKYDAFVGPSHWLY 465
           GV LSGVLL+ +S   LFL   +F+G   WL+
Sbjct: 266 GVMLSGVLLFIVSYLCLFLADSSFLGKYLWLF 297


>UniRef50_A7QMC2 Cluster: Chromosome undetermined scaffold_125,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_125, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 1694

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -1

Query: 512 LTHMHAYTRMCVRKPRYNQCEGPTNASYFKNNNFLEIQYSNTPLSAT 372
           LT+MH YT +C+ K   N+     N  +F   N L +  SN     T
Sbjct: 820 LTYMHFYTPLCMTKRHLNELCTLHNLDFFSLPNLLTLNLSNNSFYGT 866


>UniRef50_A3HS96 Cluster: Putative uncharacterized protein; n=1;
           Algoriphagus sp. PR1|Rep: Putative uncharacterized
           protein - Algoriphagus sp. PR1
          Length = 233

 Score = 32.7 bits (71), Expect = 6.3
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +1

Query: 214 LILKTLYAIHTLIFYGKIHLLFLHYVYTHFF 306
           ++L T++ +  LI YGK+H+LF++ V+   F
Sbjct: 35  ILLFTVFVLPILIEYGKVHILFVNVVFLFLF 65


>UniRef50_Q6ZVA9 Cluster: CDNA FLJ42813 fis, clone BRCAN2012355;
           n=1; Homo sapiens|Rep: CDNA FLJ42813 fis, clone
           BRCAN2012355 - Homo sapiens (Human)
          Length = 180

 Score = 32.7 bits (71), Expect = 6.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 485 YAYMHAYASGYISLLSYTCVSVQMHTCLH 571
           Y + H Y   YI + +YT V V +H C+H
Sbjct: 48  YTHKHMYVYTYIYVYTYTYVCVHIHICVH 76


>UniRef50_A6NHA2 Cluster: Uncharacterized protein ENSP00000355631;
           n=1; Homo sapiens|Rep: Uncharacterized protein
           ENSP00000355631 - Homo sapiens (Human)
          Length = 152

 Score = 32.7 bits (71), Expect = 6.3
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 7/45 (15%)
 Frame = +2

Query: 458 GYIEVFVRTYAYM-----HAYASGYISLLS--YTCVSVQMHTCLH 571
           GYI ++V TY YM     + Y   YIS+    Y CV +  + C H
Sbjct: 41  GYIHIYVYTYMYMLYVYTYMYVYTYISICVHIYVCVYIHKYMCTH 85


>UniRef50_UPI0000DBFE1A Cluster: UPI0000DBFE1A related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DBFE1A UniRef100 entry -
           Rattus norvegicus
          Length = 164

 Score = 32.3 bits (70), Expect = 8.3
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +2

Query: 461 YIEVFVRTYAYMHAYASGYISLLSYTCVSVQMHTCLH 571
           Y+ V+V  Y Y++ Y  G + +    CV V +H  +H
Sbjct: 59  YVYVYVYVYVYVYVYVCGCVCVCVCVCVCVCVHVHVH 95


>UniRef50_Q1X874 Cluster: Fanconi anemia A; n=1; Danio rerio|Rep:
           Fanconi anemia A - Danio rerio (Zebrafish) (Brachydanio
           rerio)
          Length = 1375

 Score = 32.3 bits (70), Expect = 8.3
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -1

Query: 539 MCTIIGLCTLTHMHAYTRMCVRKPRYNQCEGPTNA 435
           +C  +  CT THMH   R CV    Y  C     A
Sbjct: 775 VCDALSCCTDTHMHTCLRFCVSVLSYGLCRATAQA 809


>UniRef50_Q7R9X9 Cluster: Putative uncharacterized protein PY06730;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY06730 - Plasmodium yoelii
           yoelii
          Length = 888

 Score = 32.3 bits (70), Expect = 8.3
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 225 NTLCNTYSYFLRKNTSIVFTLCLYALFRVM 314
           NT    Y +FL+ N +I+F+LC+  +F V+
Sbjct: 92  NTEIKYYLFFLKANRNIIFSLCILGIFLVL 121


>UniRef50_Q6ZSA2 Cluster: CDNA FLJ45698 fis, clone FEBRA2017811;
           n=3; Homo sapiens|Rep: CDNA FLJ45698 fis, clone
           FEBRA2017811 - Homo sapiens (Human)
          Length = 415

 Score = 32.3 bits (70), Expect = 8.3
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 569 VDTYASVRLRMCTIIGLCTLTHMHAYTRM 483
           + T+    +  CT   +CT THMH YT M
Sbjct: 127 IHTHTCTHIYTCTYTVVCTHTHMHIYTHM 155


>UniRef50_A6NNQ8 Cluster: Uncharacterized protein ENSP00000371436;
           n=1; Homo sapiens|Rep: Uncharacterized protein
           ENSP00000371436 - Homo sapiens (Human)
          Length = 299

 Score = 32.3 bits (70), Expect = 8.3
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 461 YIEVFVRTYAYMHAYASGYISLLSYTCVSVQMHTCLH 571
           Y  ++ RT   +H Y    I + ++ C+ V  H C+H
Sbjct: 174 YGYMYTRTRVRIHVYTHACIHVYTHACIHVYTHACIH 210


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,589,399
Number of Sequences: 1657284
Number of extensions: 8857725
Number of successful extensions: 20464
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20373
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)