Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_N18
(342 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK125767-1|BAC86280.1| 168|Homo sapiens protein ( Homo sapiens ... 34 0.13
BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein. 31 1.2
AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5 s... 31 1.2
AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5 p... 31 1.2
AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein. 31 1.2
AB208863-1|BAD92100.1| 251|Homo sapiens protocadherin alpha 5 i... 31 1.2
BC073800-1|AAH73800.1| 589|Homo sapiens ZBTB46 protein protein. 29 2.9
BC052269-1|AAH52269.1| 589|Homo sapiens ZBTB46 protein protein. 29 2.9
AL121845-12|CAI21885.1| 589|Homo sapiens zinc finger and BTB do... 29 2.9
AK131482-1|BAD18627.1| 589|Homo sapiens protein ( Homo sapiens ... 29 2.9
U48250-1|AAC72247.1| 334|Homo sapiens protein kinase C-binding ... 29 5.0
BC146808-1|AAI46809.1| 402|Homo sapiens C9orf128 protein protein. 29 5.0
BC062590-1|AAH62590.1| 457|Homo sapiens POLM protein protein. 29 5.0
BC049202-1|AAH49202.2| 508|Homo sapiens POLM protein protein. 29 5.0
BC047511-1|AAH47511.1| 323|Homo sapiens oligodendrocyte lineage... 29 5.0
BC036245-1|AAH36245.1| 323|Homo sapiens OLIG2 protein protein. 29 5.0
AL133410-16|CAI10992.1| 156|Homo sapiens chromosome 9 open read... 29 5.0
AF221520-1|AAF61215.1| 357|Homo sapiens basic helix-loop-helix ... 29 5.0
BC101543-1|AAI01544.1| 261|Homo sapiens matrix metallopeptidase... 28 8.7
BC101541-1|AAI01542.1| 261|Homo sapiens matrix metallopeptidase... 28 8.7
AK096678-1|BAC04838.1| 738|Homo sapiens protein ( Homo sapiens ... 28 8.7
AJ251531-1|CAC08821.1| 261|Homo sapiens matrilysin-2 protein. 28 8.7
AF291665-1|AAG02470.1| 261|Homo sapiens matrix metalloproteinas... 28 8.7
AF291664-1|AAG00603.1| 261|Homo sapiens matrix metalloproteinas... 28 8.7
AF248646-1|AAF82359.1| 261|Homo sapiens matrix metalloproteinas... 28 8.7
AF230354-1|AAF80180.1| 261|Homo sapiens matrix metalloproteinas... 28 8.7
AB065923-1|BAC06138.1| 200|Homo sapiens seven transmembrane hel... 28 8.7
AB002340-1|BAA20800.3| 2467|Homo sapiens KIAA0342 protein protein. 28 8.7
>AK125767-1|BAC86280.1| 168|Homo sapiens protein ( Homo sapiens
cDNA FLJ43779 fis, clone TESTI2051488. ).
Length = 168
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 150 CIRVVHICRCGAAGGSHSAWSP-SPCKWCGCRPPHGSRH 263
C +H R G+ G S S+ P S C+WC C H S H
Sbjct: 96 CCSSLHSSR-GSRGSSWSSSPPGSTCRWCSCHSHHHSHH 133
>BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein.
Length = 890
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 30 LIDSISKYLVVFTCKVSDPVCDFCLDISAHRA*AEPG*AVCIRVVHICRCGAAGGSHS 203
L+D ++ YL++ C VS + L +A R A+P AVC R C +A GS S
Sbjct: 692 LVD-VNVYLIIAICAVSSLLVLTLLLYTALRCSAQPTEAVCTRGKPTLLCSSAVGSWS 748
>AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5
short form protein protein.
Length = 816
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 30 LIDSISKYLVVFTCKVSDPVCDFCLDISAHRA*AEPG*AVCIRVVHICRCGAAGGSHS 203
L+D ++ YL++ C VS + L +A R A+P AVC R C +A GS S
Sbjct: 692 LVD-VNVYLIIAICAVSSLLVLTLLLYTALRCSAQPTEAVCTRGKPTLLCSSAVGSWS 748
>AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5
protein.
Length = 936
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 30 LIDSISKYLVVFTCKVSDPVCDFCLDISAHRA*AEPG*AVCIRVVHICRCGAAGGSHS 203
L+D ++ YL++ C VS + L +A R A+P AVC R C +A GS S
Sbjct: 692 LVD-VNVYLIIAICAVSSLLVLTLLLYTALRCSAQPTEAVCTRGKPTLLCSSAVGSWS 748
>AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein.
Length = 816
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 30 LIDSISKYLVVFTCKVSDPVCDFCLDISAHRA*AEPG*AVCIRVVHICRCGAAGGSHS 203
L+D ++ YL++ C VS + L +A R A+P AVC R C +A GS S
Sbjct: 692 LVD-VNVYLIIAICAVSSLLVLTLLLYTALRCSAQPTEAVCTRGKPTLLCSSAVGSWS 748
>AB208863-1|BAD92100.1| 251|Homo sapiens protocadherin alpha 5
isoform 1 precursor variant protein.
Length = 251
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 30 LIDSISKYLVVFTCKVSDPVCDFCLDISAHRA*AEPG*AVCIRVVHICRCGAAGGSHS 203
L+D ++ YL++ C VS + L +A R A+P AVC R C +A GS S
Sbjct: 7 LVD-VNVYLIIAICAVSSLLVLTLLLYTALRCSAQPTEAVCTRGKPTLLCSSAVGSWS 63
>BC073800-1|AAH73800.1| 589|Homo sapiens ZBTB46 protein protein.
Length = 589
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Frame = +3
Query: 162 VHICRCGAAGGSHSAWSPSPCKWCG---CRPPHGSRHT*RRHPPASRTCSVTSHIDTMTA 332
+H C SH+ P PC+ CG R H RHT C V S + A
Sbjct: 428 MHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTLVHSKDKKYVCKVCSRVFMSAA 487
Query: 333 APG 341
+ G
Sbjct: 488 SVG 490
>BC052269-1|AAH52269.1| 589|Homo sapiens ZBTB46 protein protein.
Length = 589
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Frame = +3
Query: 162 VHICRCGAAGGSHSAWSPSPCKWCG---CRPPHGSRHT*RRHPPASRTCSVTSHIDTMTA 332
+H C SH+ P PC+ CG R H RHT C V S + A
Sbjct: 428 MHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTLVHSKDKKYVCKVCSRVFMSAA 487
Query: 333 APG 341
+ G
Sbjct: 488 SVG 490
>AL121845-12|CAI21885.1| 589|Homo sapiens zinc finger and BTB
domain containing 46 protein.
Length = 589
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Frame = +3
Query: 162 VHICRCGAAGGSHSAWSPSPCKWCG---CRPPHGSRHT*RRHPPASRTCSVTSHIDTMTA 332
+H C SH+ P PC+ CG R H RHT C V S + A
Sbjct: 428 MHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTLVHSKDKKYVCKVCSRVFMSAA 487
Query: 333 APG 341
+ G
Sbjct: 488 SVG 490
>AK131482-1|BAD18627.1| 589|Homo sapiens protein ( Homo sapiens
cDNA FLJ16656 fis, clone TESTI4038779, weakly similar
to Rattus norvegicus zinc finger protein RIN ZF (RINZF).
).
Length = 589
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Frame = +3
Query: 162 VHICRCGAAGGSHSAWSPSPCKWCG---CRPPHGSRHT*RRHPPASRTCSVTSHIDTMTA 332
+H C SH+ P PC+ CG R H RHT C V S + A
Sbjct: 428 MHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTLVHSKDKKYVCKVCSRVFMSAA 487
Query: 333 APG 341
+ G
Sbjct: 488 SVG 490
>U48250-1|AAC72247.1| 334|Homo sapiens protein kinase C-binding
protein RACK17 protein.
Length = 334
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +3
Query: 180 GAAGG-SHSAWSPSPCKWCGCRPPH 251
GA+GG H P PC C PPH
Sbjct: 291 GASGGFQHWGGMPCPCSMCQVPPPH 315
>BC146808-1|AAI46809.1| 402|Homo sapiens C9orf128 protein protein.
Length = 402
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 171 CRCGAAGGSHSAWSPSPCKWCGC 239
CRC + H+A P PC+ GC
Sbjct: 330 CRCKHSHEEHAATGPHPCRHHGC 352
>BC062590-1|AAH62590.1| 457|Homo sapiens POLM protein protein.
Length = 457
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +3
Query: 171 CRCGAAGGSHSAWSPSPCKWCGCRPPHGSRHT*RRHP 281
CRC AAGG S CG P G RH RR P
Sbjct: 292 CRCPAAGGGGS---------CGAGPAWGHRHADRRLP 319
>BC049202-1|AAH49202.2| 508|Homo sapiens POLM protein protein.
Length = 508
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +3
Query: 171 CRCGAAGGSHSAWSPSPCKWCGCRPPHGSRHT*RRHP 281
CRC AAGG S CG P G RH RR P
Sbjct: 249 CRCPAAGGGGS---------CGAGPAWGHRHADRRLP 276
>BC047511-1|AAH47511.1| 323|Homo sapiens oligodendrocyte lineage
transcription factor 2 protein.
Length = 323
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +3
Query: 180 GAAGG-SHSAWSPSPCKWCGCRPPH 251
GA+GG H P PC C PPH
Sbjct: 280 GASGGFQHWGGMPCPCSMCQVPPPH 304
>BC036245-1|AAH36245.1| 323|Homo sapiens OLIG2 protein protein.
Length = 323
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +3
Query: 180 GAAGG-SHSAWSPSPCKWCGCRPPH 251
GA+GG H P PC C PPH
Sbjct: 280 GASGGFQHWGGMPCPCSMCQVPPPH 304
>AL133410-16|CAI10992.1| 156|Homo sapiens chromosome 9 open reading
frame 128 protein.
Length = 156
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 171 CRCGAAGGSHSAWSPSPCKWCGC 239
CRC + H+A P PC+ GC
Sbjct: 84 CRCKHSHEEHAATGPHPCRHHGC 106
>AF221520-1|AAF61215.1| 357|Homo sapiens basic helix-loop-helix
protein class B 1 protein.
Length = 357
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +3
Query: 180 GAAGG-SHSAWSPSPCKWCGCRPPH 251
GA+GG H P PC C PPH
Sbjct: 314 GASGGFQHWGGMPCPCSMCQVPPPH 338
>BC101543-1|AAI01544.1| 261|Homo sapiens matrix metallopeptidase 26
protein.
Length = 261
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 159 VVHICRCGAAGGSHSAWSPSPCKW 230
++H CG GS ++ SP CKW
Sbjct: 76 LLHQPHCGVPDGSDTSISPGRCKW 99
>BC101541-1|AAI01542.1| 261|Homo sapiens matrix metallopeptidase 26
protein.
Length = 261
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 159 VVHICRCGAAGGSHSAWSPSPCKW 230
++H CG GS ++ SP CKW
Sbjct: 76 LLHQPHCGVPDGSDTSISPGRCKW 99
>AK096678-1|BAC04838.1| 738|Homo sapiens protein ( Homo sapiens
cDNA FLJ39359 fis, clone PEBLM2004290. ).
Length = 738
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = -3
Query: 256 EPCGGRQPHHLQGDGDQAECDPPAAPHRQI*TTRIHTAHPGSAHARCAEISR 101
E C G GDG AE P PH+ +H H C E+ R
Sbjct: 328 EACAGGAGVEPAGDGQAAEVCAPEHPHQ---LEHLHQIFVTKNHVLCQEVQR 376
>AJ251531-1|CAC08821.1| 261|Homo sapiens matrilysin-2 protein.
Length = 261
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 159 VVHICRCGAAGGSHSAWSPSPCKW 230
++H CG GS ++ SP CKW
Sbjct: 76 LLHQPHCGVPDGSDTSISPGRCKW 99
>AF291665-1|AAG02470.1| 261|Homo sapiens matrix
metalloproteinase-26 protein.
Length = 261
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 159 VVHICRCGAAGGSHSAWSPSPCKW 230
++H CG GS ++ SP CKW
Sbjct: 76 LLHQPHCGVPDGSDTSISPGRCKW 99
>AF291664-1|AAG00603.1| 261|Homo sapiens matrix
metalloproteinase-26 protein.
Length = 261
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 159 VVHICRCGAAGGSHSAWSPSPCKW 230
++H CG GS ++ SP CKW
Sbjct: 76 LLHQPHCGVPDGSDTSISPGRCKW 99
>AF248646-1|AAF82359.1| 261|Homo sapiens matrix
metalloproteinase-26 precursor protein.
Length = 261
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 159 VVHICRCGAAGGSHSAWSPSPCKW 230
++H CG GS ++ SP CKW
Sbjct: 76 LLHQPHCGVPDGSDTSISPGRCKW 99
>AF230354-1|AAF80180.1| 261|Homo sapiens matrix metalloproteinase
MMP-26 protein.
Length = 261
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 159 VVHICRCGAAGGSHSAWSPSPCKW 230
++H CG GS ++ SP CKW
Sbjct: 76 LLHQPHCGVPDGSDTSISPGRCKW 99
>AB065923-1|BAC06138.1| 200|Homo sapiens seven transmembrane helix
receptor protein.
Length = 200
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = -3
Query: 265 VCLEPCG---GRQPHHLQGDGDQAECDPPAAPH 176
+C +PCG + H QG +E PP PH
Sbjct: 10 LCSDPCGVCVAPKHSHSQGQQPDSELHPPCLPH 42
>AB002340-1|BAA20800.3| 2467|Homo sapiens KIAA0342 protein protein.
Length = 2467
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = -3
Query: 256 EPCGGRQPHHLQGDGDQAECDPPAAPHRQI*TTRIHTAHPGSAHARCAEISR 101
E C G GDG AE P PH+ +H H C E+ R
Sbjct: 657 EACAGGAGVEPAGDGQAAEVCAPEHPHQ---LEHLHQIFVTKNHVLCQEVQR 705
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,192,759
Number of Sequences: 237096
Number of extensions: 1175571
Number of successful extensions: 7800
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 7435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7797
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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