Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_N16
         (590 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   5.2  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    22   5.2  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    22   5.2  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   6.8  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   9.0  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   9.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.0  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   9.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.0  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 74  RVRSWLLSTRTCFGCKTFMECSPR 3
           R+  W L+ R CF  +T ++ S R
Sbjct: 367 RLAFWRLTCRKCFKSRTNLDPSNR 390


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 103 FLRCAAKQAPEYVHGCYLLEPVLAAK 26
           FLR   K  P Y H  Y++   L  +
Sbjct: 28  FLRTRTKLQPTYFHHTYIIYESLCGR 53


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 103 FLRCAAKQAPEYVHGCYLLEPVLAAK 26
           FLR   K  P Y H  Y++   L  +
Sbjct: 28  FLRTRTKLQPTYFHHTYIIYESLCGR 53


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 251 FVVLLRPIYLYSKFN 295
           F+++  PI++Y+ FN
Sbjct: 96  FMMIKTPIFIYNSFN 110


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -1

Query: 152 NIGLEADISFSETTWAILALRCQTSSRVRSWLLSTRT 42
           NI L    S + TT+  L +   T + +  WL  + T
Sbjct: 236 NILLRRHYSMNSTTYVTLTIVLMTMTLMTLWLEPSST 272


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 529 YTLNHHRKRAAT 494
           YTL HH +  AT
Sbjct: 169 YTLGHHHQNGAT 180


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 95  AQESPM*FLKN*CPLQDQCFTII 163
           A  +P   LK  CP ++ CF ++
Sbjct: 254 AGPTPGTILKKLCPQEEACFRLL 276


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 95  AQESPM*FLKN*CPLQDQCFTII 163
           A  +P   LK  CP ++ CF ++
Sbjct: 169 AGPTPGTILKKLCPQEEACFRLL 191


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 95  AQESPM*FLKN*CPLQDQCFTII 163
           A  +P   LK  CP ++ CF ++
Sbjct: 488 AGPTPGTILKKLCPQEEACFRLL 510


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,450
Number of Sequences: 438
Number of extensions: 2550
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)