Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_N14
(600 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 85 3e-17
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 85 3e-17
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 62 3e-10
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 62 3e-10
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 55 4e-08
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 55 4e-08
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 55 4e-08
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 4e-06
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 48 4e-06
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 48 4e-06
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 48 7e-06
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 48 7e-06
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 48 7e-06
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 48 7e-06
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 47 9e-06
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 47 9e-06
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 47 9e-06
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 46 3e-05
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 44 6e-05
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 44 1e-04
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 44 1e-04
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 44 1e-04
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 44 1e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 42 3e-04
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 42 3e-04
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 42 3e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 41 8e-04
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 40 0.002
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 39 0.002
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 38 0.004
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 38 0.005
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 38 0.005
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 38 0.005
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 38 0.005
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 38 0.005
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 38 0.005
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 38 0.005
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 38 0.007
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 38 0.007
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 37 0.010
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 36 0.017
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 36 0.022
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 36 0.029
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.029
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 36 0.029
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 36 0.029
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 36 0.029
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 35 0.051
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 35 0.051
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 34 0.067
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 34 0.067
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 34 0.067
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 34 0.067
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 34 0.067
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 34 0.067
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 33 0.12
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 32 0.36
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 32 0.36
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 32 0.36
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 32 0.36
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 32 0.36
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 30 1.1
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 30 1.1
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 30 1.1
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 30 1.5
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z81069-1|CAB02990.1| 359|Caenorhabditis elegans Hypothetical pr... 29 2.5
U80842-1|AAB37946.2| 1000|Caenorhabditis elegans Guanylyl cyclas... 29 2.5
AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyc... 29 2.5
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 29 3.3
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 28 4.4
Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical pr... 27 7.7
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 85.4 bits (202), Expect = 3e-17
Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Frame = +1
Query: 196 SDKELRDHFSAYGEEN*EH*CKDRSKHGEVTRVCIHSFQSARFY**GMAAGEHTINSKKV 375
++++L HF+ YGE DR+ +G F + +AA E TI K V
Sbjct: 41 NNEDLSSHFTQYGEVAQAQVKYDRT-NGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSV 99
Query: 376 DPKKAKARHGK-IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFE 552
+ K AK+R K +FVGGL S+ S+ ++++ F FG + ++E PFDK R+ F FI FE
Sbjct: 100 EVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFE 159
Query: 553 SEQVVNELLKTPKQT 597
E+ ++ KQT
Sbjct: 160 EEESADKASSQTKQT 174
Score = 54.8 bits (126), Expect = 4e-08
Identities = 20/65 (30%), Positives = 42/65 (64%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 585
KIFVGG+S E++++++ + F+ +G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 586 PKQTI 600
+QTI
Sbjct: 90 REQTI 94
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 85.4 bits (202), Expect = 3e-17
Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Frame = +1
Query: 196 SDKELRDHFSAYGEEN*EH*CKDRSKHGEVTRVCIHSFQSARFY**GMAAGEHTINSKKV 375
++++L HF+ YGE DR+ +G F + +AA E TI K V
Sbjct: 41 NNEDLSSHFTQYGEVAQAQVKYDRT-NGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSV 99
Query: 376 DPKKAKARHGK-IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFE 552
+ K AK+R K +FVGGL S+ S+ ++++ F FG + ++E PFDK R+ F FI FE
Sbjct: 100 EVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFE 159
Query: 553 SEQVVNELLKTPKQT 597
E+ ++ KQT
Sbjct: 160 EEESADKASSQTKQT 174
Score = 54.8 bits (126), Expect = 4e-08
Identities = 20/65 (30%), Positives = 42/65 (64%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 585
KIFVGG+S E++++++ + F+ +G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 586 PKQTI 600
+QTI
Sbjct: 90 REQTI 94
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 62.1 bits (144), Expect = 3e-10
Identities = 41/142 (28%), Positives = 75/142 (52%), Gaps = 14/142 (9%)
Frame = +1
Query: 193 TSDKELRDHFSAYGEEN*EH*CKD----RSK-HGEVTRVCIHSFQSARFY**GMAAGEHT 357
T+ + LRD+F +GE N +D R++ G +T V S + EH
Sbjct: 56 TTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKV------LNNREHE 109
Query: 358 INSKKVDPK---------KAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK 510
++ KK+DPK K + K+F+GGLS+ + +++K +F +G + + + FDK
Sbjct: 110 LDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDK 169
Query: 511 TKNQRKGFCFITFESEQVVNEL 576
+ +GF F+TF+S++V +++
Sbjct: 170 ATQRHRGFGFVTFDSDEVADKV 191
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/77 (29%), Positives = 41/77 (53%)
Frame = +1
Query: 349 EHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRK 528
E +N+ D GK+F+GGLS + + + ++++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 529 GFCFITFESEQVVNELL 579
GF FITF V+++L
Sbjct: 87 GFGFITFVDPSSVDKVL 103
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 239 KIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 337
++ V DP T R+RGF FI F P S+DKV
Sbjct: 70 EVNECMVMRDPATKRARGFGFITFVDPSSVDKV 102
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 230 TVRKIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 337
T K+E + D T R RGF F+ F + + DKV
Sbjct: 156 TYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKV 191
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 62.1 bits (144), Expect = 3e-10
Identities = 41/142 (28%), Positives = 75/142 (52%), Gaps = 14/142 (9%)
Frame = +1
Query: 193 TSDKELRDHFSAYGEEN*EH*CKD----RSK-HGEVTRVCIHSFQSARFY**GMAAGEHT 357
T+ + LRD+F +GE N +D R++ G +T V S + EH
Sbjct: 56 TTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKV------LNNREHE 109
Query: 358 INSKKVDPK---------KAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK 510
++ KK+DPK K + K+F+GGLS+ + +++K +F +G + + + FDK
Sbjct: 110 LDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDK 169
Query: 511 TKNQRKGFCFITFESEQVVNEL 576
+ +GF F+TF+S++V +++
Sbjct: 170 ATQRHRGFGFVTFDSDEVADKV 191
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/77 (29%), Positives = 41/77 (53%)
Frame = +1
Query: 349 EHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRK 528
E +N+ D GK+F+GGLS + + + ++++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 529 GFCFITFESEQVVNELL 579
GF FITF V+++L
Sbjct: 87 GFGFITFVDPSSVDKVL 103
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 239 KIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 337
++ V DP T R+RGF FI F P S+DKV
Sbjct: 70 EVNECMVMRDPATKRARGFGFITFVDPSSVDKV 102
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 230 TVRKIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 337
T K+E + D T R RGF F+ F + + DKV
Sbjct: 156 TYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKV 191
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK 582
KIFVGGL+S +DD ++ F+S FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Frame = +1
Query: 352 HTINSKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIKNFFSNFGNIIEVEM 498
H I+ K VDPK+A R K ++V G+ + ++D + +F+ +G + + E+
Sbjct: 86 HIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 145
Query: 499 PFDKTKNQRKGFCFITFESEQVVNE 573
DK + +GF F+TF+ V++
Sbjct: 146 ILDKATQKPRGFGFVTFDDHDSVDQ 170
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 239 KIESINVKTDPNTGRSRGFAFIVFKAPDSID 331
+I I V DP T RSRGF F+ F +D
Sbjct: 48 EITDIIVMRDPTTKRSRGFGFVTFSGKTEVD 78
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK 582
KIFVGGL+S +DD ++ F+S FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Frame = +1
Query: 352 HTINSKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIKNFFSNFGNIIEVEM 498
H I+ K VDPK+A R K ++V G+ + ++D + +F+ +G + + E+
Sbjct: 86 HIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 145
Query: 499 PFDKTKNQRKGFCFITFESEQVVNE 573
DK + +GF F+TF+ V++
Sbjct: 146 ILDKATQKPRGFGFVTFDDHDSVDQ 170
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 239 KIESINVKTDPNTGRSRGFAFIVFKAPDSID 331
+I I V DP T RSRGF F+ F +D
Sbjct: 48 EITDIIVMRDPTTKRSRGFGFVTFSGKTEVD 78
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK 582
KIFVGGL+S +DD ++ F+S FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Frame = +1
Query: 352 HTINSKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIKNFFSNFGNIIEVEM 498
H I+ K VDPK+A R K ++V G+ + ++D + +F+ +G + + E+
Sbjct: 86 HIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 145
Query: 499 PFDKTKNQRKGFCFITFESEQVVNE 573
DK + +GF F+TF+ V++
Sbjct: 146 ILDKATQKPRGFGFVTFDDHDSVDQ 170
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 239 KIESINVKTDPNTGRSRGFAFIVFKAPDSID 331
+I I V DP T RSRGF F+ F +D
Sbjct: 48 EITDIIVMRDPTTKRSRGFGFVTFSGKTEVD 78
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK 582
+FVG +S ++S+D I++ FS GN++ ++M D+ + KG+ FI F Q ++
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIR 77
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Frame = +1
Query: 352 HTINSKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIKNFFSNFGNIIEVEM 498
H I+ K VDPK+A R K ++V G+ + ++D + +F+ +G + + E+
Sbjct: 48 HIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 107
Query: 499 PFDKTKNQRKGFCFITFESEQVVNE 573
DK + +GF F+TF+ V++
Sbjct: 108 ILDKATQKPRGFGFVTFDDHDSVDQ 132
Score = 35.1 bits (77), Expect = 0.039
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 451 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK 582
++ F+S FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 44
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 239 KIESINVKTDPNTGRSRGFAFIVFKAPDSID 331
+I I V DP T RSRGF F+ F +D
Sbjct: 10 EITDIIVMRDPTTKRSRGFGFVTFSGKTEVD 40
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Frame = +1
Query: 352 HTINSKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIKNFFSNFGNIIEVEM 498
H I+ K VDPK+A R K ++V G+ + ++D + +F+ +G + + E+
Sbjct: 48 HIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 107
Query: 499 PFDKTKNQRKGFCFITFESEQVVNE 573
DK + +GF F+TF+ V++
Sbjct: 108 ILDKATQKPRGFGFVTFDDHDSVDQ 132
Score = 35.1 bits (77), Expect = 0.039
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 451 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK 582
++ F+S FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 44
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 239 KIESINVKTDPNTGRSRGFAFIVFKAPDSID 331
+I I V DP T RSRGF F+ F +D
Sbjct: 10 EITDIIVMRDPTTKRSRGFGFVTFSGKTEVD 40
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 47.6 bits (108), Expect = 7e-06
Identities = 19/70 (27%), Positives = 43/70 (61%)
Frame = +1
Query: 352 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKG 531
H+ + ++ + ++H +FVG LS ++S++ +K+ F+ FG + E ++ D + KG
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 532 FCFITFESEQ 561
+ F++F ++Q
Sbjct: 178 YGFVSFPNKQ 187
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 47.6 bits (108), Expect = 7e-06
Identities = 18/50 (36%), Positives = 33/50 (66%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
K+F+GGLS + +D+++ N+FS +G +++ + D +GF F+TF S
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFAS 99
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 242 IESINVKTDPNTGRSRGFAFIVF 310
+++I ++ DPNT SRGF F+ F
Sbjct: 76 VDAIVIR-DPNTKHSRGFGFVTF 97
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 47.6 bits (108), Expect = 7e-06
Identities = 18/50 (36%), Positives = 33/50 (66%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
K+F+GGLS + +D+++ N+FS +G +++ + D +GF F+TF S
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFAS 119
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 242 IESINVKTDPNTGRSRGFAFIVF 310
+++I ++ DPNT SRGF F+ F
Sbjct: 96 VDAIVIR-DPNTKHSRGFGFVTF 117
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 47.6 bits (108), Expect = 7e-06
Identities = 18/50 (36%), Positives = 33/50 (66%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
K+F+GGLS + +D+++ N+FS +G +++ + D +GF F+TF S
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFAS 120
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 242 IESINVKTDPNTGRSRGFAFIVF 310
+++I ++ DPNT SRGF F+ F
Sbjct: 97 VDAIVIR-DPNTKHSRGFGFVTF 118
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 47.2 bits (107), Expect = 9e-06
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 334 GMAAGEHTINSKKVDPKKAK-ARHGKIFVGGLSSEISDDEIKNFFS-NFGNIIEVEMPFD 507
G +H I KV KK + + IFVG L EI++D + FFS G + V + D
Sbjct: 222 GTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRD 281
Query: 508 KTKNQRKGFCFITFESEQVVN 570
K + KGF F+ F+ + V+
Sbjct: 282 KDTGKGKGFAFVNFKQDSSVS 302
Score = 35.9 bits (79), Expect = 0.022
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 155 GREMTKFCGAKLEHQTRNYVITSVLT-VRKIESINVKTDPNTGRSRGFAFIVFKAPDSI 328
G++M F G T + +IT + +E++ + D +TG+ +GFAF+ FK S+
Sbjct: 243 GKDMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSV 301
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEM 498
+FVG + +++ ++ FS+FG I V M
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 47.2 bits (107), Expect = 9e-06
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK- 582
+IFVGG + ++ E++ F F + +V+M Q KG+ FITFE+E E+ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 583 TPKQ 594
TPKQ
Sbjct: 126 TPKQ 129
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 47.2 bits (107), Expect = 9e-06
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK- 582
+IFVGG + ++ E++ F F + +V+M Q KG+ FITFE+E E+ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 583 TPKQ 594
TPKQ
Sbjct: 127 TPKQ 130
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Frame = +1
Query: 382 KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF---- 549
K +RH +FVG L SEI +++ F FG + E ++ D N+ KG+ F+++
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRRE 184
Query: 550 ESEQVVNEL 576
++E+ ++E+
Sbjct: 185 DAERAIDEM 193
Score = 30.7 bits (66), Expect = 0.83
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 352 HTINSKKVDP--KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQR 525
H + K D +A A + ++VG +++ + +DEI+ F FG I EV +
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKI 289
Query: 526 KGFCFITFESEQ 561
+G+ F+ FE+++
Sbjct: 290 QGYAFVKFETKE 301
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 44.4 bits (100), Expect = 6e-05
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 585
KIFVGGL SD + +F FG+I E + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 586 PKQTI 600
P I
Sbjct: 96 PNPII 100
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +1
Query: 376 DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
DP +A +G IF+ L I + + + FS FGNI+ ++ D N KG+ F+ FE+
Sbjct: 136 DPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFET 194
Query: 556 E 558
E
Sbjct: 195 E 195
Score = 37.5 bits (83), Expect = 0.007
Identities = 15/51 (29%), Positives = 31/51 (60%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 561
++V + +++DD +++ FS+FG I ++ D+ + KGF F+ FE +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPE 394
Score = 31.1 bits (67), Expect = 0.63
Identities = 14/68 (20%), Positives = 30/68 (44%)
Frame = +1
Query: 397 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNEL 576
++ +FV + +++ FS FG I + D + + KGF F+ F + +
Sbjct: 236 KYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQA 294
Query: 577 LKTPKQTI 600
++ +I
Sbjct: 295 VEKLNDSI 302
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 242 IESINVKTDPNTGRSRGFAFIVFKAPD 322
I S V D N GRS+GF F+ F+ P+
Sbjct: 369 ITSAKVMVDEN-GRSKGFGFVCFEKPE 394
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +1
Query: 376 DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
DP +A +G IF+ L I + + + FS FGNI+ ++ D N KG+ F+ FE+
Sbjct: 136 DPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFET 194
Query: 556 E 558
E
Sbjct: 195 E 195
Score = 37.5 bits (83), Expect = 0.007
Identities = 15/51 (29%), Positives = 31/51 (60%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 561
++V + +++DD +++ FS+FG I ++ D+ + KGF F+ FE +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPE 394
Score = 31.1 bits (67), Expect = 0.63
Identities = 14/68 (20%), Positives = 30/68 (44%)
Frame = +1
Query: 397 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNEL 576
++ +FV + +++ FS FG I + D + + KGF F+ F + +
Sbjct: 236 KYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQA 294
Query: 577 LKTPKQTI 600
++ +I
Sbjct: 295 VEKLNDSI 302
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 242 IESINVKTDPNTGRSRGFAFIVFKAPD 322
I S V D N GRS+GF F+ F+ P+
Sbjct: 369 ITSAKVMVDEN-GRSKGFGFVCFEKPE 394
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 415 VGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
V L E+++DE+++ F G +I + + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1
Query: 400 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL 579
H +F+GGL ++ +EI FS FG ++ V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 580 K 582
+
Sbjct: 378 E 378
Score = 35.5 bits (78), Expect = 0.029
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
Frame = +1
Query: 304 SFQSARFY**GMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNI 483
SF Y A HT+ + + K+FVGG+S ++ I FF FG +
Sbjct: 175 SFDQGNIY---TAEDVHTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTV 231
Query: 484 IEVEMPFDKTKNQR--------KGFCFITFESEQVVNELL 579
V+ P + N R + F+ + EQ V +L+
Sbjct: 232 F-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQSVIKLM 270
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1
Query: 400 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL 579
H +F+GGL ++ +EI FS FG ++ V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 580 K 582
+
Sbjct: 378 E 378
Score = 35.5 bits (78), Expect = 0.029
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
Frame = +1
Query: 304 SFQSARFY**GMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNI 483
SF Y A HT+ + + K+FVGG+S ++ I FF FG +
Sbjct: 175 SFDQGNIY---TAEDVHTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTV 231
Query: 484 IEVEMPFDKTKNQR--------KGFCFITFESEQVVNELL 579
V+ P + N R + F+ + EQ V +L+
Sbjct: 232 F-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQSVIKLM 270
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1
Query: 400 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL 579
H +F+GGL ++ +EI FS FG ++ V + D+ KG +TFE + N L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 163
Query: 580 K 582
+
Sbjct: 164 E 164
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1
Query: 400 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL 579
H +F+GGL ++ +EI FS FG ++ V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 580 K 582
+
Sbjct: 378 E 378
Score = 35.5 bits (78), Expect = 0.029
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
Frame = +1
Query: 304 SFQSARFY**GMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNI 483
SF Y A HT+ + + K+FVGG+S ++ I FF FG +
Sbjct: 175 SFDQGNIY---TAEDVHTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTV 231
Query: 484 IEVEMPFDKTKNQR--------KGFCFITFESEQVVNELL 579
V+ P + N R + F+ + EQ V +L+
Sbjct: 232 F-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQSVIKLM 270
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/64 (28%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Frame = +1
Query: 397 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF----ESEQV 564
RH +FVG LSSE+ + +++ F FG++ + ++ D + KG+ F+++ E+E+
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
Query: 565 VNEL 576
+ ++
Sbjct: 80 IEQM 83
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/50 (30%), Positives = 33/50 (66%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 558
++VG ++S +++DEI+ F++FG I EV + + +G+ F+ F+++
Sbjct: 130 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNK 172
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/64 (28%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Frame = +1
Query: 397 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF----ESEQV 564
RH +FVG LSSE+ + +++ F FG++ + ++ D + KG+ F+++ E+E+
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
Query: 565 VNEL 576
+ ++
Sbjct: 90 IEQM 93
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/50 (30%), Positives = 33/50 (66%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 558
++VG ++S +++DEI+ F++FG I EV + + +G+ F+ F+++
Sbjct: 140 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNK 182
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/64 (28%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Frame = +1
Query: 397 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF----ESEQV 564
RH +FVG LSSE+ + +++ F FG++ + ++ D + KG+ F+++ E+E+
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 192
Query: 565 VNEL 576
+ ++
Sbjct: 193 IEQM 196
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/50 (30%), Positives = 33/50 (66%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 558
++VG ++S +++DEI+ F++FG I EV + + +G+ F+ F+++
Sbjct: 243 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNK 285
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/64 (28%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Frame = +1
Query: 397 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF----ESEQV 564
RH +FVG LSSE+ + +++ F FG++ + ++ D + KG+ F+++ E+E+
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 160
Query: 565 VNEL 576
+ ++
Sbjct: 161 IEQM 164
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/50 (30%), Positives = 33/50 (66%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 558
++VG ++S +++DEI+ F++FG I EV + + +G+ F+ F+++
Sbjct: 211 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNK 253
Score = 31.1 bits (67), Expect = 0.63
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTK 516
++VG L S +++D I F+ G++ + ++ FD+ K
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 561
+++ GL +DD ++ S +GNI + DK N KG+ F+ FES Q
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 561
+++ GL +DD ++ S +GNI + DK N KG+ F+ FES Q
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 42.3 bits (95), Expect = 3e-04
Identities = 15/51 (29%), Positives = 32/51 (62%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 561
I++GGLS +S+ ++ FS +G ++ + + DK + KGF F+ ++ ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
Score = 30.7 bits (66), Expect = 0.83
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +2
Query: 239 KIESINVKTDPNTGRSRGFAFIVFK 313
++ +IN+ D +TG+S+GFAF+ +K
Sbjct: 63 EVMNINLIRDKDTGKSKGFAFLCYK 87
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +1
Query: 376 DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
DP ++ G IF+ L I + I + FS FGNI+ ++ D+ KG+ F+ FE+
Sbjct: 111 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 169
Query: 556 EQVVNELLK 582
E+ ++
Sbjct: 170 EEAAQNAIQ 178
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 561
++V L + DD +K F ++GNI ++ D+ + KGF F+ FE +
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPE 368
Score = 30.7 bits (66), Expect = 0.83
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 242 IESINVKTDPNTGRSRGFAFIVFKAPD 322
I S V TD N GRS+GF F+ F+ P+
Sbjct: 343 ITSAKVMTDEN-GRSKGFGFVCFEKPE 368
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +1
Query: 376 DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
DP ++ G IF+ L I + I + FS FGNI+ ++ D+ KG+ F+ FE+
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 106
Query: 556 EQVVNELLK 582
E+ ++
Sbjct: 107 EEAAQNAIQ 115
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 561
++V L + DD +K F ++GNI ++ D+ + KGF F+ FE +
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPE 305
Score = 30.7 bits (66), Expect = 0.83
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 242 IESINVKTDPNTGRSRGFAFIVFKAPD 322
I S V TD N GRS+GF F+ F+ P+
Sbjct: 280 ITSAKVMTDEN-GRSKGFGFVCFEKPE 305
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +1
Query: 376 DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
DP ++ G IF+ L I + I + FS FGNI+ ++ D+ KG+ F+ FE+
Sbjct: 111 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 169
Query: 556 EQVVNELLK 582
E+ ++
Sbjct: 170 EEAAQNAIQ 178
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 561
++V L + DD +K F ++GNI ++ D+ + KGF F+ FE +
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPE 368
Score = 30.7 bits (66), Expect = 0.83
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 242 IESINVKTDPNTGRSRGFAFIVFKAPD 322
I S V TD N GRS+GF F+ F+ P+
Sbjct: 343 ITSAKVMTDEN-GRSKGFGFVCFEKPE 368
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 41.1 bits (92), Expect = 6e-04
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 558
++VG + ++D++ N+FS GN+ V + D+ + +GF F+ F E
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 242 IESINVKTDPNTGRSRGFAFIVF 310
+ ++ + D TGR RGFAF+ F
Sbjct: 30 VSNVRIVCDRETGRPRGFAFVEF 52
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 41.1 bits (92), Expect = 6e-04
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 558
++VG + +++E+ NFFS+ G I V + D+ + +GF FI F E
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
Score = 30.7 bits (66), Expect = 0.83
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 230 TVRKIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 334
++ +I ++ + D TGR RGFAFI F S +
Sbjct: 27 SIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQR 61
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 40.7 bits (91), Expect = 8e-04
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTP 588
+FV + E ++D++ + FS +G I + + D+ KG+ + +E+++ NE +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 589 KQT 597
T
Sbjct: 117 NDT 119
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 558
++VG + + +++EI N+F+ G++ V + +D+ + +GF F+ F E
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 233 VRKIESINVKTDPNTGRSRGFAFIVF 310
V + ++ + D TGR RGFAF+ F
Sbjct: 29 VGHVNNVRIVYDRETGRPRGFAFVEF 54
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK 582
I+VGGL ++S+ + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIK 72
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK 582
I+VGGL ++S+ + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIK 82
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 39.1 bits (87), Expect = 0.002
Identities = 13/52 (25%), Positives = 30/52 (57%)
Frame = +1
Query: 397 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFE 552
R ++VGG + ++++ + F FG+++ + +P D + +GF F+ F+
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 558
K+FV + + +DDE+K FS FG + V K + KG F+ F++E
Sbjct: 684 KVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTE 733
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 549
K+FVG + + ++ + + F +G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +1
Query: 352 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKG 531
H + K D + R K+F+G LS + +++ ++ F+ FG+I + + D+ R G
Sbjct: 127 HPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-G 183
Query: 532 FCFITF 549
F+TF
Sbjct: 184 CAFVTF 189
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 549
K+FVG + + ++ + + F +G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +1
Query: 352 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKG 531
H + K D + R K+F+G LS + +++ ++ F+ FG+I + + D+ R G
Sbjct: 127 HPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-G 183
Query: 532 FCFITF 549
F+TF
Sbjct: 184 CAFVTF 189
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 549
K+FVG + + ++ + + F +G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +1
Query: 352 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKG 531
H + K D + R K+F+G LS + +++ ++ F+ FG+I + + D+ R G
Sbjct: 127 HPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-G 183
Query: 532 FCFITF 549
F+TF
Sbjct: 184 CAFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 549
K+FVG + + ++ + + F +G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +1
Query: 352 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKG 531
H + K D + R K+F+G LS + +++ ++ F+ FG+I + + D+ R G
Sbjct: 127 HPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-G 183
Query: 532 FCFITF 549
F+TF
Sbjct: 184 CAFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 549
K+FVG + + ++ + + F +G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +1
Query: 352 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKG 531
H + K D + R K+F+G LS + +++ ++ F+ FG+I + + D+ R G
Sbjct: 127 HPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-G 183
Query: 532 FCFITF 549
F+TF
Sbjct: 184 CAFVTF 189
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 549
K+FVG + + ++ + + F +G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 32.3 bits (70), Expect = 0.27
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +1
Query: 352 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQR 525
H + K D + R K+F+G LS + +++ ++ F+ FG+I + + D+ R
Sbjct: 127 HPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR 182
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 549
K+FVG + + ++ + + F +G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +1
Query: 352 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKG 531
H + K D + R K+F+G LS + +++ ++ F+ FG+I + + D+ R G
Sbjct: 127 HPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-G 183
Query: 532 FCFITF 549
F+TF
Sbjct: 184 CAFVTF 189
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 37.5 bits (83), Expect = 0.007
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 549
K+FVG + + + ++++ F FG I E + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 36.7 bits (81), Expect = 0.013
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 361 NSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCF 540
+S+ PK K K+F+G LS + S+DE++ F+ FG + EV + KG F
Sbjct: 111 DSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTV-LRGADGASKGCAF 168
Query: 541 ITFE 552
+ ++
Sbjct: 169 VKYK 172
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 382 KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF-ESE 558
+KA+A ++VG + + +EI+ F G++ V + D+ KGF ++ F E E
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130
Query: 559 QVVNELLKT 585
+ N L T
Sbjct: 131 GMQNALAMT 139
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/84 (22%), Positives = 36/84 (42%)
Frame = +1
Query: 334 GMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKT 513
G+ TI P + + ++V G+ ++ E+++ F FG II + D
Sbjct: 105 GLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNV 164
Query: 514 KNQRKGFCFITFESEQVVNELLKT 585
KG F+ F+ + + +KT
Sbjct: 165 TGLSKGVGFVRFDKKDEADVAIKT 188
Score = 34.7 bits (76), Expect = 0.051
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
+FV LSS+ D + FS FG I+ V++ D T+ Q KG+ F++ +
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSN 423
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 37.5 bits (83), Expect = 0.007
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 549
K+FVG + + + ++++ F FG I E + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 36.7 bits (81), Expect = 0.013
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 361 NSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCF 540
+S+ PK K K+F+G LS + S+DE++ F+ FG + EV + KG F
Sbjct: 111 DSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTV-LRGADGASKGCAF 168
Query: 541 ITFE 552
+ ++
Sbjct: 169 VKYK 172
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 561
++VG LS +D++ F G++ V M D+ K GFCF+ + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 561
++V L + DD +K F ++GNI ++ D+ + KGF F+ FE +
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPE 308
Score = 30.7 bits (66), Expect = 0.83
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 242 IESINVKTDPNTGRSRGFAFIVFKAPD 322
I S V TD N GRS+GF F+ F+ P+
Sbjct: 283 ITSAKVMTDEN-GRSKGFGFVCFEKPE 308
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 35.9 bits (79), Expect = 0.022
Identities = 17/76 (22%), Positives = 37/76 (48%)
Frame = +1
Query: 355 TINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGF 534
T N K+ + K +++ + +++++F +G+I V M +D +GF
Sbjct: 9 TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68
Query: 535 CFITFESEQVVNELLK 582
ITF+S+ N+ ++
Sbjct: 69 ASITFDSKDGANKAIE 84
Score = 34.7 bits (76), Expect = 0.051
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 242 IESINVKTDPNTGRSRGFAFIVFKAPDSIDK 334
I+S+N+ DP+TG RGFA I F + D +K
Sbjct: 51 IQSVNMFYDPDTGLHRGFASITFDSKDGANK 81
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 35.5 bits (78), Expect = 0.029
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 549
KIF+GGL + +++D++K +FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 35.5 bits (78), Expect = 0.029
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMP 501
K+FVGGL S + + +I NFFS +G ++V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 35.5 bits (78), Expect = 0.029
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 549
KIF+GGL + +++D++K +FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 35.5 bits (78), Expect = 0.029
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 549
KIF+GGL + +++D++K +FG + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 35.5 bits (78), Expect = 0.029
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 549
KIF+GGL + +++D++K +FG + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 34.7 bits (76), Expect = 0.051
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 379 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
PKK ++FVG L +E+ + E+K FS G+I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDT 159
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 34.7 bits (76), Expect = 0.051
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 379 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
PKK ++FVG L +E+ + E+K FS G+I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDT 159
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 34.3 bits (75), Expect = 0.067
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 379 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 489
PKK ++FVG L +E+ + E+K FS G+I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 34.3 bits (75), Expect = 0.067
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF-ESEQVVNEL 576
++F G L +E+SD+ + F + + + ++ + N+ KG+ F++F +SE V +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAM 261
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 34.3 bits (75), Expect = 0.067
Identities = 14/58 (24%), Positives = 34/58 (58%)
Frame = +1
Query: 382 KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
K AK ++ +++V + ++S+ ++K+ F FG I++ ++ T +GF ++ F +
Sbjct: 201 KDAK-KYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 32.3 bits (70), Expect = 0.27
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 242 IESINVKTDPNTGRSRGFAFIVFKAPDS 325
I+SIN+ DP TG + FAF+ ++ P++
Sbjct: 128 IKSINMSWDPATGHHKTFAFVEYEVPEA 155
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.067
Identities = 14/58 (24%), Positives = 34/58 (58%)
Frame = +1
Query: 382 KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
K AK ++ +++V + ++S+ ++K+ F FG I++ ++ T +GF ++ F +
Sbjct: 201 KDAK-KYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 32.3 bits (70), Expect = 0.27
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 242 IESINVKTDPNTGRSRGFAFIVFKAPDS 325
I+SIN+ DP TG + FAF+ ++ P++
Sbjct: 128 IKSINMSWDPATGHHKTFAFVEYEVPEA 155
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 34.3 bits (75), Expect = 0.067
Identities = 14/58 (24%), Positives = 34/58 (58%)
Frame = +1
Query: 382 KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
K AK ++ +++V + ++S+ ++K+ F FG I++ ++ T +GF ++ F +
Sbjct: 201 KDAK-KYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 32.3 bits (70), Expect = 0.27
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 242 IESINVKTDPNTGRSRGFAFIVFKAPDS 325
I+SIN+ DP TG + FAF+ ++ P++
Sbjct: 128 IKSINMSWDPATGHHKTFAFVEYEVPEA 155
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 34.3 bits (75), Expect = 0.067
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF-DKTKNQRKGFCFITFESEQVVNELL 579
+++VGG S+ +S ++I+N + EV + + + +GF F+ S N LL
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 415 VGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 549
V LSS ++ ++++ F FG I + ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 33.5 bits (73), Expect = 0.12
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Frame = +1
Query: 388 AKARHGKIFVGGLSSEI-------SDDEIKNFFSNFGNIIEVEMP---FDKTKNQRK-GF 534
A KI++GG++ EI ++ EIK F +G I EV MP D + K F
Sbjct: 321 ANLNERKIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAF 380
Query: 535 CFITFESEQVVNELLK 582
FIT ++ V + +
Sbjct: 381 AFITMRNKAGVKAIFE 396
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 32.7 bits (71), Expect = 0.21
Identities = 15/52 (28%), Positives = 32/52 (61%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 561
+I++G L+S +S+ +I++FF +G I +V + + GF F+ F+ ++
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKR 47
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 32.7 bits (71), Expect = 0.21
Identities = 15/52 (28%), Positives = 32/52 (61%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 561
+I++G L+S +S+ +I++FF +G I +V + + GF F+ F+ ++
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKR 47
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.21
Identities = 15/52 (28%), Positives = 32/52 (61%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 561
+I++G L+S +S+ +I++FF +G I +V + + GF F+ F+ ++
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKR 47
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 31.9 bits (69), Expect = 0.36
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 352 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK-TKNQRK 528
H N +++ + IF+ GL +IS +EIK + + ++ F K +++ K
Sbjct: 33 HYNNLPRINETQVPQSKHTIFIRGLHGDISTEEIKEYIGE--KVGKISFDFVKVAQDKSK 90
Query: 529 GFCFITFESEQVVNELLKT 585
F + FE+ E ++T
Sbjct: 91 IFVAVRFENRDEAKEFMET 109
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 31.9 bits (69), Expect = 0.36
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 352 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK-TKNQRK 528
H N +++ + IF+ GL +IS +EIK + + ++ F K +++ K
Sbjct: 33 HYNNLPRINETQVPQSKHTIFIRGLHGDISTEEIKEYIGE--KVGKISFDFVKVAQDKSK 90
Query: 529 GFCFITFESEQVVNELLKT 585
F + FE+ E ++T
Sbjct: 91 IFVAVRFENRDEAKEFMET 109
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 31.9 bits (69), Expect = 0.36
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 15/96 (15%)
Frame = +1
Query: 337 MAAGEHTINSKKVDPKKAKARHG-KIFVGGLSSEISDDEIKNFFSNFGNII--------- 486
M + + + K P A+ + K+F+GGL ++S++++ F FG ++
Sbjct: 222 MGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVLIDWPRRPEH 281
Query: 487 ---EVEMPFDKTKNQR--KGFCFITFESEQVVNELL 579
E K R G+ F+ F E+ V EL+
Sbjct: 282 NAERAEQELKKGSGSRAVTGYVFLVFTHERSVQELV 317
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFE 552
K++VGGL S+ + E++ F FG I +V + + GF F+ ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYD 47
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFE 552
K++VGGL S+ + E++ F FG I +V + + GF F+ ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYD 47
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFE 552
K++VGGL S+ + E++ F FG I +V + + GF F+ ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYD 47
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 31.9 bits (69), Expect = 0.36
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +1
Query: 352 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEI----KNFFSNFGNIIEVEMPFDKTKN 519
H I++ K + ++F+G + S DEI K ++I +P D K
Sbjct: 264 HEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVP-DNEKI 322
Query: 520 QRKGFCFITFESEQVVNEL 576
+ +GFCF+ F + +++
Sbjct: 323 KNRGFCFVDFIDHKTASDI 341
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 239 KIESINVKTDPNTGRSRGFAFIVF 310
KI + + DP +G SRG+AF+ +
Sbjct: 225 KIWDLRLMMDPMSGASRGYAFVTY 248
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 31.1 bits (67), Expect = 0.63
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = +1
Query: 442 DDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQV 564
+ E+ +F FGN++ + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 30.7 bits (66), Expect = 0.83
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 433 EISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVN 570
+ +D+E+K F ++ + D+ KGF ++TFE+EQ +N
Sbjct: 30 KFTDEELKKF--------DIHLVHDRDSGSFKGFAYVTFENEQQMN 67
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 30.7 bits (66), Expect = 0.83
Identities = 13/52 (25%), Positives = 30/52 (57%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 561
++++G L + SD ++++FF +G + +V M + GF F+ F+ ++
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQR 46
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
+FV L+ +D++++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
+FV L+ +D++++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 555
+FV L+ +D++++ FS FG I E+ D+ + FI F++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 448 EIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVV 567
+++ FFS G + +V + D + KG C++ F E+ V
Sbjct: 40 DLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 233 VRKIESINVKTDPNTGRSRGFAFIVFKAPDSI 328
V + + + TD TGRS+G ++ F +S+
Sbjct: 48 VGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 448 EIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVV 567
+++ FFS G + +V + D + KG C++ F E+ V
Sbjct: 185 DLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 233 VRKIESINVKTDPNTGRSRGFAFIVFKAPDSI 328
V + + + TD TGRS+G ++ F +S+
Sbjct: 193 VGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 346 GEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE-VEMPFDKTKNQ 522
G+HT + + K +FVG +S + SD+ I+ + GN+ + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 523 RKGFCFIT 546
GFC T
Sbjct: 88 GFGFCHFT 95
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 346 GEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE-VEMPFDKTKNQ 522
G+HT + + K +FVG +S + SD+ I+ + GN+ + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 523 RKGFCFIT 546
GFC T
Sbjct: 88 GFGFCHFT 95
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK 510
++VG L S +++D I F+ G++ + ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>Z81069-1|CAB02990.1| 359|Caenorhabditis elegans Hypothetical
protein F25H9.1 protein.
Length = 359
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 457 NFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 546
++F+N+ N+I+ E +D+ R FCFIT
Sbjct: 238 DYFTNYENLIKNESYYDEGIQCRGHFCFIT 267
>U80842-1|AAB37946.2| 1000|Caenorhabditis elegans Guanylyl cyclase
protein 15 protein.
Length = 1000
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 43 VYKCKIIKSGYTTFARLHIHNGNRHGGEM 129
VYK + I Y + L + NGN H GE+
Sbjct: 820 VYKVETIADAYMVASGLPVPNGNHHAGEI 848
>AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl
cyclase protein 21 protein.
Length = 1119
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 43 VYKCKIIKSGYTTFARLHIHNGNRHGGEM 129
VYK + I Y + L + NGN H GE+
Sbjct: 881 VYKVETIADAYMVASGLPVPNGNHHAGEI 909
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIKNFFSNFGNIIE------VEMPFDKTKNQRKGFCFITF 549
+FV G+S+ ++ I + FS G+I + +++ D+ + KG C ITF
Sbjct: 203 VFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDRNTGEPKGECMITF 255
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMP 501
KIFVGG+ +I++ +K+ F FG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 391 KARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQR-KGFCFITFESEQ 561
K +H +++ G S++ D+I + + FG V M K ++ KG FIT+++ +
Sbjct: 106 KIKHRTVYMKGFSTDTQLDDIIQWANQFGETENVLMRRLKPGDRTFKGSVFITYKTRE 163
>Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical
protein F54G8.5 protein.
Length = 844
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 560 CSDSNVMKQNPFLWFFVLSKGISTSIIFPKLL 465
CS N++K PF+ FF + +I LL
Sbjct: 283 CSSLNIVKSQPFIGFFAMFNATMATIASTSLL 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,832,189
Number of Sequences: 27780
Number of extensions: 292913
Number of successful extensions: 993
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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