Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_N13
(579 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 43 3e-05
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 43 4e-05
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 42 7e-05
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 40 2e-04
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 39 5e-04
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 38 8e-04
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 37 0.002
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 37 0.002
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 35 0.007
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 34 0.017
SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces... 33 0.040
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 32 0.053
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 29 0.37
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 29 0.65
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 27 2.0
SPBC18H10.11c |||conserved fungal protein|Schizosaccharomyces po... 27 2.6
SPCC777.05 |gtr2||Gtr1/RagA G protein Gtr2|Schizosaccharomyces p... 26 3.5
SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit Sf... 26 4.6
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 25 6.1
SPBC649.03 |rhp14||XP-A family homolog Rhp14|Schizosaccharomyces... 25 8.0
SPAC17A2.15 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 25 8.0
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 25 8.0
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 43.2 bits (97), Expect = 3e-05
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Frame = +2
Query: 206 MSSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLNFTRTKERGRKAVADLNKENIHP--NY 379
++ KVA+VTG++ GIG+ L ++ VYL R +E+ +K + ++ E H +
Sbjct: 40 LTGKVALVTGSSGGIGYVTALELARK-GAKVYL-AGRNEEKYQKVMKQIHDEVRHSKIRF 97
Query: 380 HQLDITDRKSVETFRDYIKNKYDGIDILVNNAAI 481
+LD+ D +SV + K + + ILVNNA I
Sbjct: 98 LRLDLLDFESVYQAAESFIAKEEKLHILVNNAGI 131
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 42.7 bits (96), Expect = 4e-05
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +2
Query: 209 SSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLNFTRTKERGRKAVADLNK-ENIHPNYH- 382
++KV + G N+GIG +V+ L R V+ R +A +L + HPN
Sbjct: 4 TNKVYFIAGGNRGIGLSLVKELSSREGTTVF-----ASARKPEAATELQEWSKSHPNVKT 58
Query: 383 -QLDITDRKSVETFRDYIKNKYDGIDILVNNAAI 481
+LD+T ++S + DGID+L N+ I
Sbjct: 59 VELDVTSQQSANEAAQSVAKAVDGIDVLWLNSGI 92
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 41.9 bits (94), Expect = 7e-05
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +2
Query: 206 MSSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLNFTRTKERGRKAVADLNKENIHPNYHQ 385
+ K ++TG + GIGF I + V L + R K+ A +K + +
Sbjct: 7 LKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLL-YGRNKKALEYAAELRDKHGVQAKAYS 65
Query: 386 LDITDRKSV-ETFRDYIKNKYDGIDILVNNAAIAFKHNSTE 505
I +R +V ET ++ +D+++ NA IA H S E
Sbjct: 66 CPIENRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLE 106
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 40.3 bits (90), Expect = 2e-04
Identities = 27/113 (23%), Positives = 51/113 (45%)
Frame = +2
Query: 206 MSSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLNFTRTKERGRKAVADLNKENIHPNYHQ 385
+ K VV GA KGIGF I + V+ T K +A+ +H +
Sbjct: 19 LKGKNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKKLAEETGVQVHT--LK 76
Query: 386 LDITDRKSVETFRDYIKNKYDGIDILVNNAAIAFKHNSTEPAAVQAKETLFVN 544
+DI+ +VE + I+ + I ++V NA + F+ + + + ++ + +N
Sbjct: 77 IDISRSDTVEAGVEEIQKIFKEIHVVVANAGMPFRRSVLDSPPHEFEKVMNIN 129
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 39.1 bits (87), Expect = 5e-04
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +2
Query: 224 VVTGANKGIGFGIVR-GLCKRFDGVVYLNFTRTKERGRKAVADLNKENIHPNYHQLDITD 400
++TG++KG+G+ +V+ GL + ++ + T + L +LD+TD
Sbjct: 9 LITGSSKGLGYALVKVGLAQGYNVIACSRAPDTITIEHSKLLKL----------KLDVTD 58
Query: 401 RKSVET-FRDYIKNKYDGIDILVNNA 475
KSVET F+D K ++ +DI++NNA
Sbjct: 59 VKSVETAFKD-AKRRFGNVDIVINNA 83
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 38.3 bits (85), Expect = 8e-04
Identities = 21/91 (23%), Positives = 45/91 (49%)
Frame = +2
Query: 209 SSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLNFTRTKERGRKAVADLNKENIHPNYHQL 388
++K+ + G N+GIG +V+ L R VV+ + K + + +K + + + +L
Sbjct: 4 TNKIYFIAGGNRGIGLSLVKELSNRKGTVVFA--SARKPGAATKLQEWSKSHSNVHIIKL 61
Query: 389 DITDRKSVETFRDYIKNKYDGIDILVNNAAI 481
D++ +S + D +D+L N+A+
Sbjct: 62 DVSSLESANEAAQEVTKVVDAVDVLWVNSAV 92
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 37.1 bits (82), Expect = 0.002
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +2
Query: 206 MSSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLNFTR--TKERGRKAVADLNKENIHPNY 379
+ K ++TGA+ GIG + K + L R T E K + + ++ P
Sbjct: 4 LDGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPL- 62
Query: 380 HQLDITDRKSVETFRDYIKNKYDGIDILVNNAAIA 484
+LD++D KS+ + + ++ ID+L+NNA +A
Sbjct: 63 -KLDVSDLKSIPGVIESLPKEFADIDVLINNAGLA 96
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 36.7 bits (81), Expect = 0.002
Identities = 23/97 (23%), Positives = 46/97 (47%)
Frame = +2
Query: 209 SSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLNFTRTKERGRKAVADLNKENIHPNYHQL 388
++K+ + G N+GIG +V+ L R +G V R E + + + +K + + + +L
Sbjct: 4 TNKIYFIAGGNRGIGLSLVKELSNR-EGTVVFASARKPEAATE-LQEWSKSHSNVHIIKL 61
Query: 389 DITDRKSVETFRDYIKNKYDGIDILVNNAAIAFKHNS 499
DI+ +S + +D+L N+ I N+
Sbjct: 62 DISSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNT 98
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 35.1 bits (77), Expect = 0.007
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +2
Query: 218 VAVVTGANKGIGFGIVRGLCKRFDGVVYLNFTRTKERGRKAVADLNK-ENIHPNYH--QL 388
V V+ G N+GIG +V+ L + +GV RG + ++L H N H +L
Sbjct: 8 VYVIVGGNRGIGLSLVKELSNK-EGVTVF----ASARGPGSASELKDWSKTHSNVHIIKL 62
Query: 389 DITDRKSVETFRDYIKNKYDGIDILVNNAAIA 484
D+T +S + ++ ID+L N+ I+
Sbjct: 63 DVTSLRSAKDAAMQVEKVVKCIDVLWVNSGIS 94
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 33.9 bits (74), Expect = 0.017
Identities = 27/92 (29%), Positives = 39/92 (42%)
Frame = +2
Query: 206 MSSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLNFTRTKERGRKAVADLNKENIHPNYHQ 385
+ K AVV G +GIG I + + T E+ K +A N + +
Sbjct: 19 LKGKNAVVFGGARGIGHAICSVFAEAGANAFIVYNTTPGEKAAKEIAQAN--GVKTYTCK 76
Query: 386 LDITDRKSVETFRDYIKNKYDGIDILVNNAAI 481
D+T K VE I+ +D IDI+V N I
Sbjct: 77 CDVTIPKEVEHAFAEIQKVFDTIDIVVPNNGI 108
>SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 338
Score = 32.7 bits (71), Expect = 0.040
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 12/99 (12%)
Frame = +2
Query: 215 KVAVVTGANKGIGFGIVRGLCKRF--------DGVVYLNFTRTKERGRKAVADLNK---- 358
K A++TG+N G+GFGI L + + + + R++E+ A L +
Sbjct: 5 KYALITGSNSGLGFGIATRLLQFYQPRLQDEPEVFTVILTCRSREKAEDACRRLKEFFPD 64
Query: 359 ENIHPNYHQLDITDRKSVETFRDYIKNKYDGIDILVNNA 475
I Y LD+++ SVE I ++ +D + NA
Sbjct: 65 RKIRLEYVLLDLSNMASVEAAVQDIATRFPKLDFVYLNA 103
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 32.3 bits (70), Expect = 0.053
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +2
Query: 224 VVTGANKGIGFGIVRGLCKRFDGVVYLNFTRTKERGRKAVADLNKENIHP----NYHQLD 391
+VTG ++G+G I + L R V + RT + ++AVA+L+ IH ++ +D
Sbjct: 26 LVTGGSQGLGKAIAKELVLRGANVTIV--ARTVTKLQEAVAELSDSKIHEDQQVSFESVD 83
Query: 392 ITDRKSVET 418
+T +SV +
Sbjct: 84 LTSYESVHS 92
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 29.5 bits (63), Expect = 0.37
Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Frame = +2
Query: 209 SSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLNFTRTKERGRKAVADLNKENIHPNYHQL 388
+ KV ++TG++KGIG L K+ V+ ++ + T E + + + +H
Sbjct: 5 AEKVILLTGSSKGIGLATAEALQKKAK-VIAVSRSLTPELETLLIQNPD-SFVHVKGDVT 62
Query: 389 DITDRKSVETFRDYIKNKYDGIDILVNNAAIAFKHNSTEPAAVQAKETLF-VNYFSLLST 565
++ + S+ET IK K+ +D ++ NA + A + LF +N+FS++ T
Sbjct: 63 EV-GKASIET---AIK-KFGKLDSVILNAGVLEPIAKIADADINEWRKLFDINFFSVVET 117
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 28.7 bits (61), Expect = 0.65
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +2
Query: 206 MSSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLNFTRTKERGRKA-VADLNKENIHPNYH 382
+ +V ++TGA GIG + LCK F T +R + D +K
Sbjct: 3 VEGRVVLITGAAGGIG----KVLCKMF--------TELGDRVAGIDIVDPSKVQDAALAL 50
Query: 383 QLDITDRKSVETFRDYIKNKYDGIDILVNNAAIA 484
Q D++ +ET + + ID+L+NNA +A
Sbjct: 51 QADVSKADQIETAIEKVIQTLGPIDVLINNAGLA 84
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 27.1 bits (57), Expect = 2.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 339 AFLPRSFVRVKFK*TTPSKRLQSPLTIPNPMPLLAPVTTAT 217
++ PR+ V + TP K + S P +L+PV TA+
Sbjct: 536 SYRPRNVVIKPYAAATPPKNIPSTYRAPQAPSVLSPVVTAS 576
>SPBC18H10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 432
Score = 26.6 bits (56), Expect = 2.6
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 260 IVRGLCKRFDGVVYLNFTRTKERGRKAVADLNKE--NIHPNYHQLDITDRKSVE 415
+++G C + NF++ +E K A KE N+ N H + I + S++
Sbjct: 150 LLKGFCDAIEKNKQGNFSKLREYSEKVTASALKESNNVTSNLHHIRIISKCSLK 203
>SPCC777.05 |gtr2||Gtr1/RagA G protein Gtr2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 314
Score = 26.2 bits (55), Expect = 3.5
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +2
Query: 320 KERGRKAVADLNKENIHPNYHQLDITDRKSVETFRDYIKNKYDGIDILVNNAAIAFKHNS 499
++R + +AD+ EN+ ++H I D E F I+ + L N I ++
Sbjct: 136 QQRTQDELADIGLENVPISFHLTSIFDHSIFEAFSRVIQKLIPQLPTLENLLNIFCSNSL 195
Query: 500 TEPA 511
E A
Sbjct: 196 VEKA 199
>SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit
Sfc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1339
Score = 25.8 bits (54), Expect = 4.6
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +1
Query: 418 ISRLHKKQIRRYRHFSKQCCDRVQTQLNRTCRRAGERNII 537
++++ KQI CD VQ+ N CR R ++
Sbjct: 196 VAQVSGKQIYNTEKIRSNICDAVQSSRNGICRHVDARAMV 235
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.4 bits (53), Expect = 6.1
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Frame = +2
Query: 221 AVVTGANKGIGFGIVRGLCKRFDGVVYLNFTRTKERGRKAVADLNK-ENIHPNYHQLDIT 397
AVVTGA GIG L VV + +RT+E+ +L + +D T
Sbjct: 60 AVVTGATDGIGKEYATQLAMSGFNVVLI--SRTQEKLDALAKELETVAKVKTRTIAIDYT 117
Query: 398 DRKSVETFRDYIKNKY-DGIDILVNNAAIA--FKHNSTEPAAVQAKETLFVNYFSLLSTC 568
+ + ETF ++ I +L+NN + + E + + + +N F L T
Sbjct: 118 -KTTAETFEKLHQDLVGTPITVLINNVGQSHYMPTSFAETTVKEMDDIMHINCFGTLHTT 176
Query: 569 ETL 577
+ +
Sbjct: 177 KAV 179
>SPBC649.03 |rhp14||XP-A family homolog Rhp14|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 289
Score = 25.0 bits (52), Expect = 8.0
Identities = 15/76 (19%), Positives = 33/76 (43%)
Frame = +1
Query: 232 WSQ*RHWIRYSKRTLQAFRWSCLFELHANERTWKESSRRLE*RKYPSQLPPIGHH*QEKC 411
WS ++RY +W + L A + + ++ +K+ QL + + +
Sbjct: 186 WSNMMLYLRYQVEEFAKKKWGSMEALDAEFERREVQKKEMKEKKFEKQLLELRK--RTRT 243
Query: 412 RNISRLHKKQIRRYRH 459
N SR+ ++ R++ H
Sbjct: 244 SNYSRMSIREKRKHVH 259
>SPAC17A2.15 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 69
Score = 25.0 bits (52), Expect = 8.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 147 RTIHFFHCFLPHC 185
+ ++F H FLPHC
Sbjct: 51 KRLNFLHAFLPHC 63
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 25.0 bits (52), Expect = 8.0
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 206 MSSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLNFTRTKERGRKAVADLNK 358
M+ V +VTG + GIG +V L VV L T + + DL K
Sbjct: 73 MNGMVVMVTGGSSGIGQVVVEKLASLGAQVVILLRTEPDQFTVDYIMDLRK 123
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,148,622
Number of Sequences: 5004
Number of extensions: 40620
Number of successful extensions: 146
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 248115846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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