Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_N13
         (579 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.5  
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    23   9.5  
AY117999-1|AAM66798.1|  120|Anopheles gambiae glucose-6-phosphat...    23   9.5  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 466 KQCCDRVQTQLNRTCRRAGERNIIR*LFFPLVHL 567
           ++  DR+  +L R CR+A +      L   LV L
Sbjct: 464 RKTIDRINRRLRRACRKAVKSQAFYWLIIILVFL 497


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 281 ACKVLLLYRIQCLY 240
           ACKV L  R  CLY
Sbjct: 149 ACKVFLFMRAFCLY 162


>AY117999-1|AAM66798.1|  120|Anopheles gambiae glucose-6-phosphate
           dehydrogenase protein.
          Length = 120

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +1

Query: 400 QEKCRNISRLHKKQIRRYRHF 462
           +EKCR   ++ + Q+ ++  F
Sbjct: 16  EEKCRQYMKVQEDQVEKFEEF 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,153
Number of Sequences: 2352
Number of extensions: 10132
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)