Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_N11
         (368 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   0.43 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   4.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   4.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   4.0  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   4.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   9.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    20   9.2  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    20   9.2  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 0.43
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 356 LPRVAIPPVFPPLLI 312
           +P + +PP+FPP +I
Sbjct: 180 VPPLPLPPIFPPTMI 194


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 225 PTPHPSSAAPLF 190
           PT HP +A P F
Sbjct: 116 PTGHPGAALPFF 127



 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -3

Query: 225 PTPHPSSAAPLFPFGS 178
           P PHP    P  P G+
Sbjct: 737 PPPHPHHQPPRNPVGT 752


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 225 PTPHPSSAAPLF 190
           PT HP +A P F
Sbjct: 8   PTGHPGAALPFF 19



 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -3

Query: 225 PTPHPSSAAPLFPFGS 178
           P PHP    P  P G+
Sbjct: 629 PPPHPHHQPPRNPVGT 644


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 34  TFKETWRRLG 63
           TF ETW +LG
Sbjct: 399 TFDETWAKLG 408


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 356 LPRVAIPPVFPPLLI 312
           +P + +PP+F P +I
Sbjct: 180 VPPLPLPPIFAPTMI 194


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 360 YASQGRHSSSVSTPPHP 310
           Y S+GRHS  V T   P
Sbjct: 155 YDSRGRHSEIVETVYDP 171


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 170 RHEPPFESKLPRCSL 126
           R +P F+  LP C +
Sbjct: 366 RDDPTFDESLPGCHM 380


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 170 RHEPPFESKLPRCSL 126
           R +P F+  LP C +
Sbjct: 373 RDDPTFDESLPGCHM 387


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 158 PFESKLPRCSLHLYQPHRRVR 96
           P    + RC+L  ++P+R+ R
Sbjct: 99  PTGPPIVRCALRKHKPNRKPR 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,346
Number of Sequences: 336
Number of extensions: 1457
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)