Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_N10
         (460 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4PC49 Cluster: Predicted protein; n=1; Ustilago maydis...    34   1.7  
UniRef50_Q6ILM4 Cluster: HDC08933; n=1; Drosophila melanogaster|...    32   5.2  
UniRef50_Q5FQR0 Cluster: ABC transporter permease protein; n=1; ...    32   6.8  
UniRef50_UPI00006CC2C6 Cluster: cyclic nucleotide-binding domain...    31   9.0  
UniRef50_Q9N497 Cluster: Putative uncharacterized protein; n=1; ...    31   9.0  

>UniRef50_Q4PC49 Cluster: Predicted protein; n=1; Ustilago
           maydis|Rep: Predicted protein - Ustilago maydis (Smut
           fungus)
          Length = 358

 Score = 33.9 bits (74), Expect = 1.7
 Identities = 24/75 (32%), Positives = 37/75 (49%)
 Frame = +2

Query: 149 PDRPVLTRTYLTTHYIRLIRR*NGQSIRSNGAILITNDDRLRPD*DILKEKICAADDDES 328
           P +P+L R Y T H    I        R NG+  +  + R R D D+L +   ++DDD+S
Sbjct: 66  PIQPMLERKYSTRHLDLDI---GSVHARKNGSSTLL-ERRKRDDFDLLGDHSESSDDDDS 121

Query: 329 SQAVARRRHRPVGKE 373
             + A R  +  G+E
Sbjct: 122 GNSRAARNQKARGRE 136


>UniRef50_Q6ILM4 Cluster: HDC08933; n=1; Drosophila
           melanogaster|Rep: HDC08933 - Drosophila melanogaster
           (Fruit fly)
          Length = 157

 Score = 32.3 bits (70), Expect = 5.2
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +2

Query: 2   QRHARSHNCVLYNPIATRCYEQVICVCHEHRHLGPNRTL 118
           QRH R HN +   P+   C+    C CH   H  P  T+
Sbjct: 85  QRHFRPHNPLPNFPLLVACFAAGCCCCHFLLHFLPAETM 123


>UniRef50_Q5FQR0 Cluster: ABC transporter permease protein; n=1;
           Gluconobacter oxydans|Rep: ABC transporter permease
           protein - Gluconobacter oxydans (Gluconobacter
           suboxydans)
          Length = 279

 Score = 31.9 bits (69), Expect = 6.8
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = -2

Query: 249 NIAPLDLILCPFYLLIRRM*WVVKYVLVSTGRSGLMLNPFFFLNKVLLGP 100
           +IAP+   L   +  +  + W  K  L++TGR  L+L+PF+ L +++  P
Sbjct: 192 DIAPIVASLMQIFFFVTPVIW--KPELITTGRQYLLLDPFYSLLEIVRAP 239


>UniRef50_UPI00006CC2C6 Cluster: cyclic nucleotide-binding domain
           containing protein; n=1; Tetrahymena thermophila
           SB210|Rep: cyclic nucleotide-binding domain containing
           protein - Tetrahymena thermophila SB210
          Length = 1472

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +2

Query: 29  VLYNPIATRCYEQVICVCHEHRHLGPNRTLLRKKNGFNIRPDRPVLTRTYLTTHY 193
           V ++ + T     +ICVCH+   LG    L  KK  F+I+    + ++ Y  +HY
Sbjct: 526 VEHSKLVTMKENLLICVCHQFEILGEESVLGLKKRDFSIQAS-TLDSQVYRISHY 579


>UniRef50_Q9N497 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 483

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 301 NMCCGRRRIFTGCSPAETSSCR 366
           N CCG+R +F G S   T +CR
Sbjct: 215 NRCCGKRDVFDGSSSNRTQTCR 236


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,178,391
Number of Sequences: 1657284
Number of extensions: 9051421
Number of successful extensions: 15709
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15707
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)