Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_N10
         (460 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   3.9  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    22   9.0  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +2

Query: 26  CVLYNPIATRCYEQVICVCHEHRHLGPNRTLLRKKNGFNIRPDRPVL 166
           C + N    RC+ Q+   C E   + P+ T    +     +P R VL
Sbjct: 54  CTMPNFTHPRCHGQIEKYCPEEYTVDPSNTFQLVQGRELTKPSRRVL 100


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 83  HEHRHLGPNRTLLRKKN 133
           H H HL P+  L+++ N
Sbjct: 285 HHHHHLPPSTALVQQTN 301


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,822
Number of Sequences: 2352
Number of extensions: 9583
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)