Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_N10
         (460 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271845-1|CAB76376.1| 1238|Drosophila melanogaster SMC1 protein...    29   3.0  
AF225909-1|AAF43149.1| 1238|Drosophila melanogaster cohesin subu...    29   3.0  
X76209-1|CAA53802.1|  508|Drosophila melanogaster tyrosine hydro...    28   5.3  
U14395-2|AAA62877.1|  508|Drosophila melanogaster tyrosine hydro...    28   5.3  
U14395-1|AAA62876.1|  579|Drosophila melanogaster tyrosine hydro...    28   5.3  
AY122201-1|AAM52713.1|  544|Drosophila melanogaster LD47396p pro...    28   5.3  
AY071698-1|AAL49320.1|  579|Drosophila melanogaster RH16704p pro...    28   5.3  
AE014297-822|AAF54292.2|  544|Drosophila melanogaster CG8351-PA ...    28   5.3  
AE014296-1147|AAF50648.1|  579|Drosophila melanogaster CG10118-P...    28   5.3  
AE014296-1146|AAN12080.1|  508|Drosophila melanogaster CG10118-P...    28   5.3  

>AJ271845-1|CAB76376.1| 1238|Drosophila melanogaster SMC1 protein
           protein.
          Length = 1238

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +2

Query: 20  HNCVLYNPIATRCYEQVICVCHEHRHLGPNRTLLRKKNGFNIRPDRPVLTRTYL 181
           H   + NP++  CY     V +E RH+   R ++   + + I  +  V + TYL
Sbjct: 89  HGSSIGNPVSRSCYVTAKFVLNEERHMDFQRAVIGGSSEYRINGE-SVSSSTYL 141


>AF225909-1|AAF43149.1| 1238|Drosophila melanogaster cohesin subunit
           protein.
          Length = 1238

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +2

Query: 20  HNCVLYNPIATRCYEQVICVCHEHRHLGPNRTLLRKKNGFNIRPDRPVLTRTYL 181
           H   + NP++  CY     V +E RH+   R ++   + + I  +  V + TYL
Sbjct: 89  HGSSIGNPVSRSCYVTAKFVLNEERHMDFQRAVIGGSSEYRINGE-SVSSSTYL 141


>X76209-1|CAA53802.1|  508|Drosophila melanogaster tyrosine
           hydroxylase protein.
          Length = 508

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = +2

Query: 11  ARSHNCVLYNPIATRCYEQVICVCHEHRHLGPNRTLLRKKNGFNIRPDRPVLT-RTYLTT 187
           A  H C  Y     +  ++ I V      L      LRK  GF++RP   +LT R +L +
Sbjct: 251 APKHACAEYRAAFQKLQDEQIFVETRLPQLQEMSDFLRKNTGFSLRPAAGLLTARDFLAS 310

Query: 188 HYIRLIR 208
              R+ +
Sbjct: 311 LAFRIFQ 317


>U14395-2|AAA62877.1|  508|Drosophila melanogaster tyrosine
           hydroxylase type 1, neuronalform protein.
          Length = 508

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = +2

Query: 11  ARSHNCVLYNPIATRCYEQVICVCHEHRHLGPNRTLLRKKNGFNIRPDRPVLT-RTYLTT 187
           A  H C  Y     +  ++ I V      L      LRK  GF++RP   +LT R +L +
Sbjct: 251 APKHACAEYRAAFQKLQDEQIFVETRLPQLQEMSDFLRKNTGFSLRPAAGLLTARDFLAS 310

Query: 188 HYIRLIR 208
              R+ +
Sbjct: 311 LAFRIFQ 317


>U14395-1|AAA62876.1|  579|Drosophila melanogaster tyrosine
           hydroxylase type 2, hypodermalform protein.
          Length = 579

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = +2

Query: 11  ARSHNCVLYNPIATRCYEQVICVCHEHRHLGPNRTLLRKKNGFNIRPDRPVLT-RTYLTT 187
           A  H C  Y     +  ++ I V      L      LRK  GF++RP   +LT R +L +
Sbjct: 322 APKHACAEYRAAFQKLQDEQIFVETRLPQLQEMSDFLRKNTGFSLRPAAGLLTARDFLAS 381

Query: 188 HYIRLIR 208
              R+ +
Sbjct: 382 LAFRIFQ 388


>AY122201-1|AAM52713.1|  544|Drosophila melanogaster LD47396p
           protein.
          Length = 544

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +1

Query: 316 RRRIFTGCSPAETSSCRKRRFAEEFLIKTD*SL 414
           R  +F GC  A+TS+   R  AE+FL +T+ SL
Sbjct: 356 RFNLFQGCPNAKTSTLILRGGAEQFLEETERSL 388


>AY071698-1|AAL49320.1|  579|Drosophila melanogaster RH16704p
           protein.
          Length = 579

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = +2

Query: 11  ARSHNCVLYNPIATRCYEQVICVCHEHRHLGPNRTLLRKKNGFNIRPDRPVLT-RTYLTT 187
           A  H C  Y     +  ++ I V      L      LRK  GF++RP   +LT R +L +
Sbjct: 322 APKHACAEYRAAFQKLQDEQIFVETRLPQLQEMSDFLRKNTGFSLRPAAGLLTARDFLAS 381

Query: 188 HYIRLIR 208
              R+ +
Sbjct: 382 LAFRIFQ 388


>AE014297-822|AAF54292.2|  544|Drosophila melanogaster CG8351-PA
           protein.
          Length = 544

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +1

Query: 316 RRRIFTGCSPAETSSCRKRRFAEEFLIKTD*SL 414
           R  +F GC  A+TS+   R  AE+FL +T+ SL
Sbjct: 356 RFNLFQGCPNAKTSTLILRGGAEQFLEETERSL 388


>AE014296-1147|AAF50648.1|  579|Drosophila melanogaster CG10118-PB,
           isoform B protein.
          Length = 579

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = +2

Query: 11  ARSHNCVLYNPIATRCYEQVICVCHEHRHLGPNRTLLRKKNGFNIRPDRPVLT-RTYLTT 187
           A  H C  Y     +  ++ I V      L      LRK  GF++RP   +LT R +L +
Sbjct: 322 APKHACAEYRAAFQKLQDEQIFVETRLPQLQEMSDFLRKNTGFSLRPAAGLLTARDFLAS 381

Query: 188 HYIRLIR 208
              R+ +
Sbjct: 382 LAFRIFQ 388


>AE014296-1146|AAN12080.1|  508|Drosophila melanogaster CG10118-PA,
           isoform A protein.
          Length = 508

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = +2

Query: 11  ARSHNCVLYNPIATRCYEQVICVCHEHRHLGPNRTLLRKKNGFNIRPDRPVLT-RTYLTT 187
           A  H C  Y     +  ++ I V      L      LRK  GF++RP   +LT R +L +
Sbjct: 251 APKHACAEYRAAFQKLQDEQIFVETRLPQLQEMSDFLRKNTGFSLRPAAGLLTARDFLAS 310

Query: 188 HYIRLIR 208
              R+ +
Sbjct: 311 LAFRIFQ 317


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,104,188
Number of Sequences: 53049
Number of extensions: 412904
Number of successful extensions: 666
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)