Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_N07
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    27   0.38 
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   1.5  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   3.6  
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    24   4.7  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    23   6.2  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.2  

>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 333 AME*GADATVGYPMDNESAATLATPA 256
           A+  GA ATV  PMD +  A  A PA
Sbjct: 246 ALAAGAPATVSTPMDKDDPAAAAAPA 271


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
 Frame = +3

Query: 177  CTDLRYHLRAGNSRHQAGATL---SRRSSLLEW-PTWPRSRC---PSGTRRSRLRLIP 329
            C D R H R G +   AGA L    R +++ EW  TW         SG  R   RLIP
Sbjct: 864  CEDTRVHSRRGTA---AGAQLRKEERETTIAEWQATWDSDAAGHQASGYVRWAHRLIP 918


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 196 WYRRSVHLFDNKTIRKG 146
           W+R+ + L DN  +R+G
Sbjct: 9   WFRKGLRLHDNPALREG 25


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 306 VGYPMDNESAATLATPARNFVAKGS 232
           +GYP D  +A T+AT A +FV   S
Sbjct: 646 MGYPFDRRTADTVATLA-DFVTPNS 669


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 250 VPCWSGQRGRALVVHRVPDGRVCA 321
           +P WS Q  + + V+R+ +  +CA
Sbjct: 348 IPIWSNQECQEVYVNRIYNTTLCA 371


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 243 RRSSLLEWPTWPRSRCPSGTRRSR 314
           RR S      WP  R P   RRSR
Sbjct: 258 RRRSPRSGGRWPSCRSPPARRRSR 281


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,757
Number of Sequences: 2352
Number of extensions: 10728
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)