Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_N06
         (541 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6IH04 Cluster: HDC03927; n=1; Drosophila melanogaster|...    33   5.6  
UniRef50_Q84J38 Cluster: MADS affecting flowering 2 variant II; ...    32   7.3  
UniRef50_A6XN02 Cluster: Expressed protein; n=1; Prunus persica|...    32   7.3  
UniRef50_Q8HIS7 Cluster: Orf318; n=1; Monosiga brevicollis|Rep: ...    32   7.3  
UniRef50_Q6K1J4 Cluster: Transcription factor CCR4-like protein;...    32   7.3  
UniRef50_A7F5R9 Cluster: Putative uncharacterized protein; n=2; ...    32   7.3  
UniRef50_Q2FA06 Cluster: Putative uncharacterized protein; n=4; ...    32   9.7  

>UniRef50_Q6IH04 Cluster: HDC03927; n=1; Drosophila
           melanogaster|Rep: HDC03927 - Drosophila melanogaster
           (Fruit fly)
          Length = 182

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -3

Query: 347 RNTA*QPVRAEPRTEKNVIRMHLSHRFFTSRITHSFLTINPPSR 216
           R T  + V    RT   ++R+HL+ R F    +HS   ++PP R
Sbjct: 78  RQTVTETVTTSARTPLALVRLHLAIRIFVPFHSHSLSPVSPPRR 121


>UniRef50_Q84J38 Cluster: MADS affecting flowering 2 variant II;
           n=2; Arabidopsis thaliana|Rep: MADS affecting flowering
           2 variant II - Arabidopsis thaliana (Mouse-ear cress)
          Length = 145

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
 Frame = -1

Query: 535 LKKN*NSDCKRPRIYNHKRGHIQSKFRFGTLIRSSIVRLGISNALNPYKSRYLSQTYSKF 356
           +K+  N   ++      + G I+   +   L  SSI  L +S +   YKS       SK 
Sbjct: 8   IKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSA-SGDNMSKI 66

Query: 355 L-RYEIPHSSPC-VRNLARKKMSFECISLIDSLRVASRIRS*QLTLPLVI 212
           + RYEI H+      +LA K  ++  + L + L +  R+      LPL++
Sbjct: 67  IDRYEIHHADELEALDLAEKTRNY--LPLKELLEIVQRLAQRHFYLPLLL 114


>UniRef50_A6XN02 Cluster: Expressed protein; n=1; Prunus
           persica|Rep: Expressed protein - Prunus persica (Peach)
          Length = 324

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -2

Query: 132 GKIAFIMFQFHILNENNICLVFTSIGAPNNSYV 34
           G ++F +F    + ENN  ++F ++G PNN+ V
Sbjct: 61  GNLSFPLFDVSAVYENNQIVIFATVGLPNNASV 93


>UniRef50_Q8HIS7 Cluster: Orf318; n=1; Monosiga brevicollis|Rep:
           Orf318 - Monosiga brevicollis
          Length = 318

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -3

Query: 311 RTEKNVIRMHLSHRFFTSRITHSFLTINPPSRDYISIGIILTTKKT 174
           +T  N+  +  +H  F  + TH+ L IN     Y S  IIL  K T
Sbjct: 15  KTTHNLFNIKTTHNLFNIKTTHNLLKINGTLNRYYSSNIILKKKFT 60


>UniRef50_Q6K1J4 Cluster: Transcription factor CCR4-like protein;
           n=1; Gibberella avenacea|Rep: Transcription factor
           CCR4-like protein - Gibberella avenacea
          Length = 160

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
 Frame = -1

Query: 517 SDCKRPRIYNHKRGHIQSKFRFGTLIRSSIVRLGISNALN--PYKSRYLSQTYSKF---- 356
           S+  +  +YN  R       R+ T I S++    +SN L   P++SR L Q    F    
Sbjct: 91  SNLSQDDMYNESRSESLQPSRYRTSICSNVTESTLSNCLTPHPFRSRVLRQRAMDFIPRR 150

Query: 355 LRYEIPHSS 329
           LR+ +PH +
Sbjct: 151 LRFWLPHQA 159


>UniRef50_A7F5R9 Cluster: Putative uncharacterized protein; n=2;
            Sclerotiniaceae|Rep: Putative uncharacterized protein -
            Sclerotinia sclerotiorum 1980
          Length = 2430

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
 Frame = -3

Query: 278  SHRFFTSRITHSFLTINPPSRDYISI---GIILTTKKTRQPLGLQKRKLETLEKL 123
            + R  + R+ H+FL   P + +Y+ +    I+   +K +QP  ++K  +ET+ K+
Sbjct: 959  TRRLPSERVLHAFLVFGPSAEEYMHLIVPVIVSVFEKPQQPSFIRKAAIETIGKI 1013


>UniRef50_Q2FA06 Cluster: Putative uncharacterized protein; n=4;
           Vibrio sp. DAT722|Rep: Putative uncharacterized protein
           - Vibrio sp. DAT722
          Length = 113

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
 Frame = -3

Query: 263 TSRITHSFLTINPPSR----DYISIGIILTTKKTRQPLG-LQKRKLETLE 129
           TS    +F+  N PSR    + +SI ++   ++T+QPLG LQ   LET+E
Sbjct: 61  TSASKSAFVPTNSPSRFATQNRLSIALLCQHQRTKQPLGQLQNLGLETVE 110


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,148,572
Number of Sequences: 1657284
Number of extensions: 10462620
Number of successful extensions: 22074
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22073
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)