Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_N05
         (465 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4UHK2 Cluster: Putative uncharacterized protein; n=2; ...    33   4.1  
UniRef50_A3YK84 Cluster: Type III restriction enzyme R protein, ...    31   9.4  
UniRef50_Q8I5G5 Cluster: Putative uncharacterized protein; n=2; ...    31   9.4  

>UniRef50_Q4UHK2 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 498

 Score = 32.7 bits (71), Expect = 4.1
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = -1

Query: 378 ICYPNIALNMHKKLSK*NLNNAICHISNYIILILENKNVNNDKIASL*Y 232
           IC  N  L+   K+   +++N IC++  Y +L  +NK++ N+ I    Y
Sbjct: 199 ICIINKILSNINKIGSIDISNLICYLHTYNLLNTDNKSIINNNIGKRLY 247


>UniRef50_A3YK84 Cluster: Type III restriction enzyme R protein,
           putative; n=2; Campylobacter jejuni|Rep: Type III
           restriction enzyme R protein, putative - Campylobacter
           jejuni subsp. jejuni CF93-6
          Length = 947

 Score = 31.5 bits (68), Expect = 9.4
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -1

Query: 366 NIALNMHKKLSK*NLNNAICHISNYIILILENKNVNNDKI 247
           NIAL ++KKL   NL+  I  +SN  +  +  KN NND++
Sbjct: 377 NIALELYKKLQNQNLHFGINTLSNDFLKYI--KNANNDEL 414


>UniRef50_Q8I5G5 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1187

 Score = 31.5 bits (68), Expect = 9.4
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -1

Query: 369 PNIALNMHKKLSK*NLNNAICHISNYIILILENKNVNNDK 250
           PNI +N +KK+   N N  + H++N +I    N +  N+K
Sbjct: 192 PNIGINNNKKVKNKNKNKLLKHMNNNVINETTNVSFENNK 231


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 314,659,284
Number of Sequences: 1657284
Number of extensions: 4462867
Number of successful extensions: 8073
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8067
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)