Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_N05
         (465 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   1.7  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   4.0  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   4.0  
AY062192-1|AAL58553.1|  151|Anopheles gambiae cytochrome P450 CY...    22   9.2  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 441 IVTPRV*KYYWLFLIYTGTLSICYPNIALNMH 346
           +V P + K+  LF +   T SIC   I LN+H
Sbjct: 297 LVVPLLGKFV-LFTMILDTFSICVTVIVLNIH 327


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 441 IVTPRV*KYYWLFLIYTGTLSICYPNIALNMH 346
           +V P + KY  +F +   ++SIC   + LN+H
Sbjct: 301 LVVPLLGKYL-IFAMILVSISICVTVVVLNVH 331


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 441 IVTPRV*KYYWLFLIYTGTLSICYPNIALNMH 346
           +V P + KY  +F +   ++SIC   + LN+H
Sbjct: 301 LVVPLLGKYL-IFAMILVSISICVTVVVLNVH 331


>AY062192-1|AAL58553.1|  151|Anopheles gambiae cytochrome P450
           CYP4H17 protein.
          Length = 151

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 433 PASVKILLVIFNLYRDP 383
           PA   I L IFN++R+P
Sbjct: 95  PAGATISLNIFNVHRNP 111


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 335,169
Number of Sequences: 2352
Number of extensions: 4075
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40395045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)