Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_N03
(505 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 37 0.007
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 37 0.007
AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated... 37 0.007
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 37 0.007
AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical ... 36 0.013
Z83235-2|CAB05773.2| 265|Caenorhabditis elegans Hypothetical pr... 30 0.83
AF456248-1|AAL59606.1| 265|Caenorhabditis elegans secreted 2-im... 30 0.83
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 1.1
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 30 1.1
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 30 1.1
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 30 1.1
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 30 1.1
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 30 1.1
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 1.4
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 1.4
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 29 1.4
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 29 1.4
U80438-4|AAB37634.2| 1415|Caenorhabditis elegans Uncoordinated p... 29 1.4
U70618-1|AAB17088.1| 1415|Caenorhabditis elegans unc-40 protein. 29 1.4
AF106579-6|ABS19465.1| 406|Caenorhabditis elegans Hypothetical ... 27 5.8
AF188751-1|AAF00548.1| 1083|Caenorhabditis elegans tyrosine kina... 27 7.7
AF078787-11|AAC26948.2| 1083|Caenorhabditis elegans Vegf (vascul... 27 7.7
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 37.1 bits (82), Expect = 0.007
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 241 KPFKSVPVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDSTLL 366
K F PV + E T+ LPC ++PK + WYKD ++
Sbjct: 111 KHFLKSPVAQRVQEGTTLQLPCQAPESDPKAELTWYKDGVVV 152
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 37.1 bits (82), Expect = 0.007
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 241 KPFKSVPVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDSTLL 366
K F PV + E T+ LPC ++PK + WYKD ++
Sbjct: 139 KHFLKSPVAQRVQEGTTLQLPCQAPESDPKAELTWYKDGVVV 180
>AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated
protein 5, isoform b protein.
Length = 567
Score = 37.1 bits (82), Expect = 0.007
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 241 KPFKSVPVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDSTLL 366
K F PV + E T+ LPC ++PK + WYKD ++
Sbjct: 111 KHFLKSPVAQRVQEGTTLQLPCQAPESDPKAELTWYKDGVVV 152
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 37.1 bits (82), Expect = 0.007
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 241 KPFKSVPVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDSTLL 366
K F PV + E T+ LPC ++PK + WYKD ++
Sbjct: 111 KHFLKSPVAQRVQEGTTLQLPCQAPESDPKAELTWYKDGVVV 152
>AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical
protein C26G2.1 protein.
Length = 1270
Score = 36.3 bits (80), Expect = 0.013
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +1
Query: 211 ILIKNIVKCEKPFKSVPVIVKAYENDTVLLPCYLEGAEPKLR-VRWYKDSTLLGDSEDAH 387
I IK V+ S+ V A DTVLL C +G K + WYK+ +L H
Sbjct: 772 ITIKLAVEYSARITSISTPVIAATGDTVLLECEADGEPSKANMIHWYKNGEILAAQHRGH 831
Query: 388 HHLPPRVRMHANYSLQSRYAC 450
+R++A Y C
Sbjct: 832 K--KAILRLNATEQQSGEYTC 850
>Z83235-2|CAB05773.2| 265|Caenorhabditis elegans Hypothetical
protein K10C3.3 protein.
Length = 265
Score = 30.3 bits (65), Expect = 0.83
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 280 ENDTVLLPCYLEGAEPKLRVRWYKDSTLLGDSEDAHHHLPPRVRMHANYSLQSRYAC 450
+ ++V L C + G PK V+W KDS L S+ + +ANY+ Y+C
Sbjct: 147 KGESVTLTCPVTGY-PKPVVKWTKDSAPLALSQSVSMEGSTVIVTNANYTDAGTYSC 202
>AF456248-1|AAL59606.1| 265|Caenorhabditis elegans secreted
2-immunoglobulin-domainprotein ZIG-1 protein.
Length = 265
Score = 30.3 bits (65), Expect = 0.83
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 280 ENDTVLLPCYLEGAEPKLRVRWYKDSTLLGDSEDAHHHLPPRVRMHANYSLQSRYAC 450
+ ++V L C + G PK V+W KDS L S+ + +ANY+ Y+C
Sbjct: 147 KGESVTLTCPVTGY-PKPVVKWTKDSAPLALSQSVSMEGSTVIVTNANYTDAGTYSC 202
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 247 FKSVPVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDSTLLGDSEDAH 387
FK + I + E +T C + G +P V+W+KD T L + + H
Sbjct: 4021 FKELSAI-QVKETETAKFECKVSGTKPD--VKWFKDGTPLKEDKRVH 4064
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 247 FKSVPVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDSTLLGDSEDAH 387
FK + I + E +T C + G +P V+W+KD T L + + H
Sbjct: 3381 FKELSAI-QVKETETAKFECKVSGTKPD--VKWFKDGTPLKEDKRVH 3424
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 247 FKSVPVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDSTLLGDSEDAH 387
FK + I + E +T C + G +P V+W+KD T L + + H
Sbjct: 4021 FKELSAI-QVKETETAKFECKVSGTKPD--VKWFKDGTPLKEDKRVH 4064
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 247 FKSVPVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDSTLLGDSEDAH 387
FK + I + E +T C + G +P V+W+KD T L + + H
Sbjct: 4021 FKELSAI-QVKETETAKFECKVSGTKPD--VKWFKDGTPLKEDKRVH 4064
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 247 FKSVPVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDSTLLGDSEDAH 387
FK + I + E +T C + G +P V+W+KD T L + + H
Sbjct: 3381 FKELSAI-QVKETETAKFECKVSGTKPD--VKWFKDGTPLKEDKRVH 3424
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 247 FKSVPVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDSTLLGDSEDAH 387
FK + I + E +T C + G +P V+W+KD T L + + H
Sbjct: 4021 FKELSAI-QVKETETAKFECKVSGTKPD--VKWFKDGTPLKEDKRVH 4064
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 256 VPVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDS 357
VP V EN+T +L C + G+ P RW+K S
Sbjct: 456 VPENVTVVENETAILTCKVSGS-PAPTFRWFKGS 488
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 256 VPVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDS 357
VP V EN+T +L C + G+ P RW+K S
Sbjct: 985 VPENVTVVENETAILTCKVSGS-PAPTFRWFKGS 1017
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 256 VPVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDS 357
VP V EN+T +L C + G+ P RW+K S
Sbjct: 666 VPENVTVVENETAILTCKVSGS-PAPTFRWFKGS 698
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 256 VPVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDS 357
VP V EN+T +L C + G+ P RW+K S
Sbjct: 456 VPENVTVVENETAILTCKVSGS-PAPTFRWFKGS 488
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 256 VPVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDS 357
VP V EN+T +L C + G+ P RW+K S
Sbjct: 985 VPENVTVVENETAILTCKVSGS-PAPTFRWFKGS 1017
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 256 VPVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDS 357
VP V EN+T +L C + G+ P RW+K S
Sbjct: 666 VPENVTVVENETAILTCKVSGS-PAPTFRWFKGS 698
>U80438-4|AAB37634.2| 1415|Caenorhabditis elegans Uncoordinated
protein 40 protein.
Length = 1415
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +1
Query: 259 PVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDSTLLGDSE 378
P A E V L C A P+ RV WYK+ + SE
Sbjct: 342 PTTKVAVETADVELECGTAAARPEARVNWYKNGEAIIGSE 381
>U70618-1|AAB17088.1| 1415|Caenorhabditis elegans unc-40 protein.
Length = 1415
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +1
Query: 259 PVIVKAYENDTVLLPCYLEGAEPKLRVRWYKDSTLLGDSE 378
P A E V L C A P+ RV WYK+ + SE
Sbjct: 342 PTTKVAVETADVELECGTAAARPEARVNWYKNGEAIIGSE 381
>AF106579-6|ABS19465.1| 406|Caenorhabditis elegans Hypothetical
protein F54E2.4 protein.
Length = 406
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 271 KAYENDTVLLPCYLEGAEPKLRVRWYKD 354
+A +T++L C LEG P ++W KD
Sbjct: 28 RAVVGETIILECQLEG-HPDPAIKWLKD 54
>AF188751-1|AAF00548.1| 1083|Caenorhabditis elegans tyrosine kinase
receptor T17A3.1 protein.
Length = 1083
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 277 YENDTVLLPCYLEGAEPKLRVRW-YKDSTLLGDSE-DAHHHLPPRVRMHANYSLQSRYAC 450
YE DTV L C + + + W +++ ++L +E H L +A S Y C
Sbjct: 577 YEGDTVKLTCVVPKLAGRCSITWVHRNLSILHSTEVTEHSQLSFLYIRNATTSASGNYTC 636
Query: 451 I 453
+
Sbjct: 637 V 637
>AF078787-11|AAC26948.2| 1083|Caenorhabditis elegans Vegf (vascular
endothelial growthfactor) receptor family protein 1
protein.
Length = 1083
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 277 YENDTVLLPCYLEGAEPKLRVRW-YKDSTLLGDSE-DAHHHLPPRVRMHANYSLQSRYAC 450
YE DTV L C + + + W +++ ++L +E H L +A S Y C
Sbjct: 577 YEGDTVKLTCVVPKLAGRCSITWVHRNLSILHSTEVTEHSQLSFLYIRNATTSASGNYTC 636
Query: 451 I 453
+
Sbjct: 637 V 637
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,067,272
Number of Sequences: 27780
Number of extensions: 222694
Number of successful extensions: 634
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -