Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_N02
(597 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 225 9e-59
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 225 9e-59
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 225 9e-59
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 225 9e-59
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 103 6e-22
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 96 1e-19
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 47 6e-05
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 47 6e-05
BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein ... 32 1.8
BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein ... 32 1.8
Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex late... 31 3.1
BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for IM... 31 3.1
BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex pr... 31 3.1
BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex pr... 31 3.1
BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein. 31 3.1
AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex pr... 31 3.1
AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex pr... 31 3.1
AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex p... 31 3.1
AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex pr... 31 3.1
AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein pr... 31 3.1
BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for IM... 30 7.2
AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein. 30 7.2
AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein. 30 7.2
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 225 bits (550), Expect = 9e-59
Identities = 101/121 (83%), Positives = 117/121 (96%)
Frame = +1
Query: 106 KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIR 285
KRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+GVDIRV VKGGGHVAQ+YAIR
Sbjct: 26 KRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIR 85
Query: 286 QAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSY 465
Q+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSY
Sbjct: 86 QSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSY 145
Query: 466 R 468
R
Sbjct: 146 R 146
Score = 38.7 bits (86), Expect = 0.015
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3
Query: 45 PIQAVQVFGRKKTATAVAYWK 107
P+Q+VQVFGRKKTATAVA+ K
Sbjct: 6 PLQSVQVFGRKKTATAVAHCK 26
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 225 bits (550), Expect = 9e-59
Identities = 101/121 (83%), Positives = 117/121 (96%)
Frame = +1
Query: 106 KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIR 285
KRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+GVDIRV VKGGGHVAQ+YAIR
Sbjct: 26 KRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIR 85
Query: 286 QAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSY 465
Q+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSY
Sbjct: 86 QSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSY 145
Query: 466 R 468
R
Sbjct: 146 R 146
Score = 38.7 bits (86), Expect = 0.015
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3
Query: 45 PIQAVQVFGRKKTATAVAYWK 107
P+Q+VQVFGRKKTATAVA+ K
Sbjct: 6 PLQSVQVFGRKKTATAVAHCK 26
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 225 bits (550), Expect = 9e-59
Identities = 101/121 (83%), Positives = 117/121 (96%)
Frame = +1
Query: 106 KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIR 285
KRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+GVDIRV VKGGGHVAQ+YAIR
Sbjct: 26 KRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIR 85
Query: 286 QAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSY 465
Q+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSY
Sbjct: 86 QSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSY 145
Query: 466 R 468
R
Sbjct: 146 R 146
Score = 38.7 bits (86), Expect = 0.015
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3
Query: 45 PIQAVQVFGRKKTATAVAYWK 107
P+Q+VQVFGRKKTATAVA+ K
Sbjct: 6 PLQSVQVFGRKKTATAVAHCK 26
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 225 bits (550), Expect = 9e-59
Identities = 101/121 (83%), Positives = 117/121 (96%)
Frame = +1
Query: 106 KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIR 285
KRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+GVDIRV VKGGGHVAQ+YAIR
Sbjct: 26 KRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIR 85
Query: 286 QAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSY 465
Q+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSY
Sbjct: 86 QSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSY 145
Query: 466 R 468
R
Sbjct: 146 R 146
Score = 38.7 bits (86), Expect = 0.015
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3
Query: 45 PIQAVQVFGRKKTATAVAYWK 107
P+Q+VQVFGRKKTATAVA+ K
Sbjct: 6 PLQSVQVFGRKKTATAVAHCK 26
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 103 bits (246), Expect = 6e-22
Identities = 44/63 (69%), Positives = 56/63 (88%)
Frame = +1
Query: 106 KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIR 285
KRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+GVDIRV VKGGGHVAQ+Y
Sbjct: 26 KRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYGES 85
Query: 286 QAI 294
Q +
Sbjct: 86 QEL 88
Score = 38.7 bits (86), Expect = 0.015
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3
Query: 45 PIQAVQVFGRKKTATAVAYWK 107
P+Q+VQVFGRKKTATAVA+ K
Sbjct: 6 PLQSVQVFGRKKTATAVAHCK 26
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 95.9 bits (228), Expect = 1e-19
Identities = 49/87 (56%), Positives = 62/87 (71%)
Frame = +1
Query: 112 GHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQA 291
G G +R+N PL+++ LQYKL E LLL KE+ +G+DI V VKG GHV Q+YA+ Q
Sbjct: 39 GSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGMDIHVRVKGSGHVVQIYAVLQY 98
Query: 292 ISKALIAFYQKYVDEASKKEIKDILVQ 372
ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 99 ISKALVPCYPKYVDEAS-EEIKDTLTR 124
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 46.8 bits (106), Expect = 6e-05
Identities = 40/116 (34%), Positives = 53/116 (45%)
Frame = +1
Query: 106 KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIR 285
K G G ++VNG L P + Q + Q ++ D+ TV GGG AQ AIR
Sbjct: 287 KHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTVSGGGRSAQAGAIR 345
Query: 286 QAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARY 453
A++KAL +F + DE LL DPR E KK G GAR ++
Sbjct: 346 LAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRVRERKKPGQEGARRKF 391
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 46.8 bits (106), Expect = 6e-05
Identities = 40/116 (34%), Positives = 53/116 (45%)
Frame = +1
Query: 106 KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIR 285
K G G ++VNG L P + Q + Q ++ D+ TV GGG AQ AIR
Sbjct: 193 KHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTVSGGGRSAQAGAIR 251
Query: 286 QAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARY 453
A++KAL +F + DE LL DPR E KK G GAR ++
Sbjct: 252 LAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRVRERKKPGQEGARRKF 297
>BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 31.9 bits (69), Expect = 1.8
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 157 EPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 333
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
>BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 31.9 bits (69), Expect = 1.8
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 157 EPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 333
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
>Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex lateral
element protein protein.
Length = 1530
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 268 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 399
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for
IMAGE:8860302) protein.
Length = 792
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 268 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 399
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 338 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 381
>BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 268 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 399
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 268 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 399
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein.
Length = 1024
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 268 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 399
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 268 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 399
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 268 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 399
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 268 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 399
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 268 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 399
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein
protein.
Length = 520
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 268 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 399
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 61 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 104
>BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for
IMAGE:6451327) protein.
Length = 204
Score = 29.9 bits (64), Expect = 7.2
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 337 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 420
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein.
Length = 689
Score = 29.9 bits (64), Expect = 7.2
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 337 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 420
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein.
Length = 198
Score = 29.9 bits (64), Expect = 7.2
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 337 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 420
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,024,512
Number of Sequences: 237096
Number of extensions: 2099695
Number of successful extensions: 8877
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 8558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8873
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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