Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_N02
         (597 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   230   1e-60
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   230   1e-60
AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...    48   7e-06
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...    48   7e-06

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  230 bits (562), Expect = 1e-60
 Identities = 105/121 (86%), Positives = 117/121 (96%)
 Frame = +1

Query: 106 KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIR 285
           KRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLLGKEKF+GVDIRV V GGGHVAQ+YAIR
Sbjct: 28  KRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKFAGVDIRVRVSGGGHVAQIYAIR 87

Query: 286 QAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSY 465
           QAISKAL+AFYQKYVDEASKKEIKDILVQYDR+LLV DPRRCEPKKFGGPGARARYQKSY
Sbjct: 88  QAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKSY 147

Query: 466 R 468
           R
Sbjct: 148 R 148



 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = +3

Query: 24  VHEARREPIQAVQVFGRKKTATAVAYWK 107
           + + RREP+QAVQVFGRKKTATAVAY K
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCK 28


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  230 bits (562), Expect = 1e-60
 Identities = 105/121 (86%), Positives = 117/121 (96%)
 Frame = +1

Query: 106 KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIR 285
           KRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLLGKEKF+GVDIRV V GGGHVAQ+YAIR
Sbjct: 28  KRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKFAGVDIRVRVSGGGHVAQIYAIR 87

Query: 286 QAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSY 465
           QAISKAL+AFYQKYVDEASKKEIKDILVQYDR+LLV DPRRCEPKKFGGPGARARYQKSY
Sbjct: 88  QAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKSY 147

Query: 466 R 468
           R
Sbjct: 148 R 148



 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = +3

Query: 24  VHEARREPIQAVQVFGRKKTATAVAYWK 107
           + + RREP+QAVQVFGRKKTATAVAY K
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCK 28


>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 36/114 (31%), Positives = 53/114 (46%)
 Frame = +1

Query: 112 GHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQA 291
           G G + +NG+ +   E    + +L  P+     E    VD+   V+GGG   Q  AIR  
Sbjct: 289 GTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEGGGPSGQAGAIRWG 346

Query: 292 ISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARY 453
           I+ +L +F  + + E+ +             LL  D RR E KKFG  GAR +Y
Sbjct: 347 IAMSLRSFVDQEMIESMRL----------AGLLTRDYRRRERKKFGQEGARRKY 390


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 36/114 (31%), Positives = 53/114 (46%)
 Frame = +1

Query: 112 GHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQA 291
           G G + +NG+ +   E    + +L  P+     E    VD+   V+GGG   Q  AIR  
Sbjct: 289 GTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEGGGPSGQAGAIRWG 346

Query: 292 ISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARY 453
           I+ +L +F  + + E+ +             LL  D RR E KKFG  GAR +Y
Sbjct: 347 IAMSLRSFVDQEMIESMRL----------AGLLTRDYRRRERKKFGQEGARRKY 390


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,401,038
Number of Sequences: 53049
Number of extensions: 625794
Number of successful extensions: 1518
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1516
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)