Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_N02
         (597 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    27   0.14 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    25   0.56 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.3  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   1.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   4.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   4.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   4.0  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   6.9  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 76  LRPKTCTAWIGSRLASCTAAILTL 5
           L P  C +W+   +  CTA+IL+L
Sbjct: 106 LGPMLCDSWVSLDILLCTASILSL 129


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 25.0 bits (52), Expect = 0.56
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 61  CTAWIGSRLASCTAAILTL 5
           C  W+   + SCTA+IL L
Sbjct: 114 CDLWVSFDVLSCTASILNL 132


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 271 PVQHVHHLLQSL*YPHQRTFPCLAK 197
           P  H HH  QSL + H R  P L++
Sbjct: 350 PHHHHHHQTQSLQHLHYRQPPTLSE 374


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 297 RDGLSDCINLCNMSTTFYSHSNIHTRE 217
           RD   +CI +CNM         IHT E
Sbjct: 49  RDAYDNCITVCNMENV--DPLGIHTGE 73


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 61  CTAWIGSRLASCTAAILTL 5
           C+ W+   +  CTA+IL L
Sbjct: 138 CSIWLAVDVWMCTASILNL 156


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 61  CTAWIGSRLASCTAAILTL 5
           C  W+   +  CTA+IL L
Sbjct: 109 CKLWLTCDVLCCTASILNL 127


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 61  CTAWIGSRLASCTAAILTL 5
           C  W+   +  CTA+IL L
Sbjct: 109 CKLWLTCDVLCCTASILNL 127


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 61  CTAWIGSRLASCTAAILTL 5
           C  W+   +  CTA+IL L
Sbjct: 109 CKLWLTCDVLCCTASILNL 127


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/24 (25%), Positives = 12/24 (50%)
 Frame = +3

Query: 54  AVQVFGRKKTATAVAYWKTRTWSV 125
           ++ ++  K       YWK+ TW +
Sbjct: 180 SLALYNNKNFVDLSDYWKSGTWDI 203


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,314
Number of Sequences: 438
Number of extensions: 3541
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)