Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_N01
(483 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4SID3 Cluster: Chromosome 5 SCAF14581, whole genome sh... 73 3e-12
UniRef50_A7S2T6 Cluster: Predicted protein; n=1; Nematostella ve... 73 5e-12
UniRef50_Q7KVR8 Cluster: CG9113-PD, isoform D; n=12; Eumetazoa|R... 66 4e-10
UniRef50_O43747 Cluster: AP-1 complex subunit gamma-1; n=39; Deu... 64 2e-09
UniRef50_Q86V28 Cluster: AP1G2 protein; n=5; Catarrhini|Rep: AP1... 59 6e-08
UniRef50_O75843 Cluster: AP-1 complex subunit gamma-2; n=25; Eut... 59 6e-08
UniRef50_Q17A99 Cluster: Adaptin, alpha/gamma/epsilon; n=2; Culi... 57 2e-07
UniRef50_Q08C04 Cluster: Zgc:153847; n=2; Danio rerio|Rep: Zgc:1... 50 4e-05
UniRef50_A7RUG6 Cluster: Predicted protein; n=1; Nematostella ve... 50 4e-05
UniRef50_UPI000155C25C Cluster: PREDICTED: similar to mKIAA1080 ... 46 6e-04
UniRef50_Q9LRA3 Cluster: T23E23.7; n=17; Eukaryota|Rep: T23E23.7... 46 6e-04
UniRef50_Q86YA9 Cluster: Golgi associated, gamma adaptin ear con... 43 0.003
UniRef50_Q9UJY5 Cluster: ADP-ribosylation factor-binding protein... 43 0.003
UniRef50_Q9UJY4 Cluster: ADP-ribosylation factor-binding protein... 42 0.006
UniRef50_UPI0000ECAA36 Cluster: ADP-ribosylation factor-binding ... 41 0.013
UniRef50_Q99128 Cluster: AP-1 complex subunit gamma-1 (Gamma(1)-... 41 0.013
UniRef50_UPI0000E46480 Cluster: PREDICTED: similar to MGC82581 p... 41 0.017
UniRef50_Q54T69 Cluster: Clathrin-adaptor gamma chain; n=3; Dict... 41 0.017
UniRef50_UPI00015B5E21 Cluster: PREDICTED: similar to golgi asso... 40 0.029
UniRef50_Q4T7C6 Cluster: Chromosome undetermined SCAF8147, whole... 40 0.029
UniRef50_Q4SVR8 Cluster: Chromosome undetermined SCAF13729, whol... 40 0.029
UniRef50_UPI0000DB70F9 Cluster: PREDICTED: similar to ADP-ribosy... 39 0.051
UniRef50_A2A9W7 Cluster: Golgi associated, gamma adaptin ear con... 38 0.16
UniRef50_Q9NZ52 Cluster: ADP-ribosylation factor-binding protein... 37 0.21
UniRef50_A4IGH8 Cluster: Si:ch211-108p22.4 protein; n=6; Danio r... 37 0.27
UniRef50_Q6ZQV8 Cluster: CDNA FLJ46861 fis, clone UTERU3011092; ... 36 0.36
UniRef50_Q4YBB2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.48
UniRef50_A2FD06 Cluster: Putative uncharacterized protein; n=1; ... 36 0.48
UniRef50_Q9UU81 Cluster: AP-1 complex subunit gamma-1 (Gamma(1)-... 36 0.48
UniRef50_UPI000065D824 Cluster: ADP-ribosylation factor-binding ... 36 0.63
UniRef50_UPI0000DC0A8F Cluster: UPI0000DC0A8F related cluster; n... 35 0.84
UniRef50_A7S1M5 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.1
UniRef50_A4H7Q0 Cluster: Hypothetical repeat protein; n=1; Leish... 34 1.9
UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;... 33 2.6
UniRef50_A4JQK5 Cluster: Putative uncharacterized protein precur... 33 2.6
UniRef50_Q6ZTU1 Cluster: CDNA FLJ44225 fis, clone THYMU3006168; ... 33 3.4
UniRef50_A7AUY9 Cluster: Putative uncharacterized protein; n=1; ... 32 5.9
UniRef50_Q8I738 Cluster: TcC31.4; n=1; Trypanosoma cruzi|Rep: Tc... 32 7.8
UniRef50_Q6E6C2 Cluster: Trehalose-6-phosphate phosphatase; n=1;... 32 7.8
UniRef50_Q9Y238 Cluster: Deleted in lung and esophageal cancer p... 32 7.8
>UniRef50_Q4SID3 Cluster: Chromosome 5 SCAF14581, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 5
SCAF14581, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 867
Score = 73.3 bits (172), Expect = 3e-12
Identities = 31/61 (50%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
Frame = +2
Query: 14 QLDMMSPSGTVLPA--QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFPP 187
QL ++SPS V+PA QG +TQV+R+ NP + LR+RI+++YN+ G+PV + EVN+FPP
Sbjct: 804 QLQLLSPSSNVVPALNQGTVTQVIRVLNPQKQQLRMRIKLTYNLKGSPVQDLAEVNNFPP 863
Query: 188 E 190
+
Sbjct: 864 Q 864
>UniRef50_A7S2T6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 192
Score = 72.5 bits (170), Expect = 5e-12
Identities = 33/61 (54%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPAQ--GEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP 184
LQL + SPSG VLP G +TQ++RI NP ++PLR+RI++ Y ++G V EQ E+NSFP
Sbjct: 130 LQLQLQSPSGNVLPPNNGGTVTQLIRIANPQQNPLRMRIKLLYTLNGAAVQEQGEINSFP 189
Query: 185 P 187
P
Sbjct: 190 P 190
>UniRef50_Q7KVR8 Cluster: CG9113-PD, isoform D; n=12; Eumetazoa|Rep:
CG9113-PD, isoform D - Drosophila melanogaster (Fruit
fly)
Length = 982
Score = 66.1 bits (154), Expect = 4e-10
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = +2
Query: 14 QLDMMSPSGTVLPAQGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFPPE 190
QL M++PSG+VLP G ITQ +R+ S + LR+R+R+ Y +DG +EQTEV+ FP +
Sbjct: 916 QLQMLTPSGSVLPPGGVITQEMRVVATSNATLRMRLRIQYVLDGQQQVEQTEVSGFPEQ 974
>UniRef50_O43747 Cluster: AP-1 complex subunit gamma-1; n=39;
Deuterostomia|Rep: AP-1 complex subunit gamma-1 - Homo
sapiens (Human)
Length = 822
Score = 64.1 bits (149), Expect = 2e-09
Identities = 27/61 (44%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Frame = +2
Query: 14 QLDMMSPSGTVLPA--QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFPP 187
QL ++SPS +++PA G ITQV+++ NP + LR+RI+++YN G+ + + EVN+FPP
Sbjct: 759 QLQLLSPSSSIVPAFNTGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPP 818
Query: 188 E 190
+
Sbjct: 819 Q 819
>UniRef50_Q86V28 Cluster: AP1G2 protein; n=5; Catarrhini|Rep: AP1G2
protein - Homo sapiens (Human)
Length = 640
Score = 58.8 bits (136), Expect = 6e-08
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPAQG--EITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP 184
LQL + +PSG +PA+G ITQ+ RI NP+++PLRL++R++Y+ V E EVN+ P
Sbjct: 576 LQLQLQAPSGNTVPARGGLPITQLFRILNPNKAPLRLKLRLTYDHFHQSVQEIFEVNNLP 635
Query: 185 PE 190
E
Sbjct: 636 VE 637
>UniRef50_O75843 Cluster: AP-1 complex subunit gamma-2; n=25;
Euteleostomi|Rep: AP-1 complex subunit gamma-2 - Homo
sapiens (Human)
Length = 785
Score = 58.8 bits (136), Expect = 6e-08
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPAQG--EITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP 184
LQL + +PSG +PA+G ITQ+ RI NP+++PLRL++R++Y+ V E EVN+ P
Sbjct: 721 LQLQLQAPSGNTVPARGGLPITQLFRILNPNKAPLRLKLRLTYDHFHQSVQEIFEVNNLP 780
Query: 185 PE 190
E
Sbjct: 781 VE 782
>UniRef50_Q17A99 Cluster: Adaptin, alpha/gamma/epsilon; n=2;
Culicidae|Rep: Adaptin, alpha/gamma/epsilon - Aedes
aegypti (Yellowfever mosquito)
Length = 872
Score = 56.8 bits (131), Expect = 2e-07
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = +2
Query: 17 LDMMSPSGTV-LPAQGEITQVLRI-TNPSRS-PLRLRIRVSYNVDGNPVLEQTEVNSFPP 187
+ MM PS TV LP + + + I TNP+ S PLR+++R SY++ V+EQ +VN FPP
Sbjct: 809 IQMMVPSSTVMLPGESVVQDINVIRTNPAASSPLRMKVRFSYDIGNYSVMEQADVNDFPP 868
Query: 188 ELF 196
+LF
Sbjct: 869 DLF 871
>UniRef50_Q08C04 Cluster: Zgc:153847; n=2; Danio rerio|Rep:
Zgc:153847 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 345
Score = 49.6 bits (113), Expect = 4e-05
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPAQG--EITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP 184
+QL M +PSG V+ A G ++TQ + + NP+R L +R+RVS + G + + +V SFP
Sbjct: 206 VQLQMKAPSGNVIAAHGLGQVTQTVLLNNPNRVGLEMRVRVSCSDRGTVLQDTVQVGSFP 265
>UniRef50_A7RUG6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 723
Score = 49.6 bits (113), Expect = 4e-05
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = +2
Query: 26 MSPSGTVLPAQGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP 184
+ P +LPA ITQV+ I NP++ +RL+ +V Y VDG +E EV++FP
Sbjct: 670 LPPYNPILPASA-ITQVMLIANPTKEKVRLKFKVMYEVDGATAVETGEVDNFP 721
>UniRef50_UPI000155C25C Cluster: PREDICTED: similar to mKIAA1080
protein; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to mKIAA1080 protein - Ornithorhynchus anatinus
Length = 516
Score = 45.6 bits (103), Expect = 6e-04
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +2
Query: 65 ITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP-PELF 196
I+QVL + NP + P+RLR ++++ G P E EVN+FP PEL+
Sbjct: 469 ISQVLLLANPHKEPVRLRYKLTFTQGGQPFSEVGEVNTFPEPELW 513
>UniRef50_Q9LRA3 Cluster: T23E23.7; n=17; Eukaryota|Rep: T23E23.7 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 910
Score = 45.6 bits (103), Expect = 6e-04
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Frame = +2
Query: 8 RLQLDMMSPSGTVLPAQGEITQVLRITNPS--RSPLRLRIRVSYNVDGNPVLEQTEVNSF 181
+L LD S + + G ITQ LR+TN + L +R+R+ Y ++G VLE+ +V++F
Sbjct: 847 QLHLDPASSNTLLASGSGAITQNLRVTNSQQGKKSLVMRMRIGYKLNGKDVLEEGQVSNF 906
Query: 182 P 184
P
Sbjct: 907 P 907
>UniRef50_Q86YA9 Cluster: Golgi associated, gamma adaptin ear
containing, ARF binding protein 1; n=17;
Euteleostomi|Rep: Golgi associated, gamma adaptin ear
containing, ARF binding protein 1 - Homo sapiens (Human)
Length = 552
Score = 43.2 bits (97), Expect = 0.003
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPA------QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT LPA ITQVL + NP + +RLR ++++ + E +V
Sbjct: 481 MKVKLQPPSGTELPAFNPIVHPSAITQVLLLANPQKEKVRLRYKLTFTMGDQTYNEMGDV 540
Query: 173 NSFPP 187
+ FPP
Sbjct: 541 DQFPP 545
>UniRef50_Q9UJY5 Cluster: ADP-ribosylation factor-binding protein
GGA1; n=18; Eutheria|Rep: ADP-ribosylation
factor-binding protein GGA1 - Homo sapiens (Human)
Length = 639
Score = 43.2 bits (97), Expect = 0.003
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPA------QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT LPA ITQVL + NP + +RLR ++++ + E +V
Sbjct: 568 MKVKLQPPSGTELPAFNPIVHPSAITQVLLLANPQKEKVRLRYKLTFTMGDQTYNEMGDV 627
Query: 173 NSFPP 187
+ FPP
Sbjct: 628 DQFPP 632
>UniRef50_Q9UJY4 Cluster: ADP-ribosylation factor-binding protein
GGA2; n=20; Eutheria|Rep: ADP-ribosylation
factor-binding protein GGA2 - Homo sapiens (Human)
Length = 613
Score = 42.3 bits (95), Expect = 0.006
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +2
Query: 32 PSGTVLPAQGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP 184
P+ + L I+Q+L + NP + P+RLR ++++N G P E EV FP
Sbjct: 555 PAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGEVKDFP 605
>UniRef50_UPI0000ECAA36 Cluster: ADP-ribosylation factor-binding
protein GGA2 (Golgi-localized, gamma ear-containing,
ARF-binding protein 2) (Gamma-adaptin-related protein 2)
(VHS domain and ear domain of gamma-adaptin) (Vear).;
n=3; Amniota|Rep: ADP-ribosylation factor-binding
protein GGA2 (Golgi-localized, gamma ear-containing,
ARF-binding protein 2) (Gamma-adaptin-related protein 2)
(VHS domain and ear domain of gamma-adaptin) (Vear). -
Gallus gallus
Length = 610
Score = 41.1 bits (92), Expect = 0.013
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPA------QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + SGT LPA ++QVL + NP + P+RL+ ++++ PV E EV
Sbjct: 540 MKIKLQPASGTELPAFSPLLPPAVVSQVLLLANPHKDPVRLKYKLAFRHGAQPVSEVGEV 599
Query: 173 NSFP 184
FP
Sbjct: 600 TGFP 603
>UniRef50_Q99128 Cluster: AP-1 complex subunit gamma-1
(Gamma(1)-adaptin); n=17; Dikarya|Rep: AP-1 complex
subunit gamma-1 (Gamma(1)-adaptin) - Ustilago maydis
(Smut fungus)
Length = 853
Score = 41.1 bits (92), Expect = 0.013
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +2
Query: 8 RLQLDMMSPSGTVLPAQGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTE 169
+LQ+ +S S TV P E TQ LR+ P + +RLR+R+++ VDG+ V +QT+
Sbjct: 796 KLQMQAISNS-TVHPDSTE-TQPLRVMVPPGAAVRLRLRIAFQVDGHSVQDQTD 847
>UniRef50_UPI0000E46480 Cluster: PREDICTED: similar to MGC82581
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC82581 protein -
Strongylocentrotus purpuratus
Length = 730
Score = 40.7 bits (91), Expect = 0.017
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPAQGEI------TQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PS T LPA I TQV+ + NP++ +RLR ++ Y ++ P E EV
Sbjct: 665 MRVKLQPPSATDLPAYNPILPPSAITQVMLLANPNKEKIRLRFKMQYTLNDLPFTELGEV 724
Query: 173 NSFP 184
+ P
Sbjct: 725 DKMP 728
>UniRef50_Q54T69 Cluster: Clathrin-adaptor gamma chain; n=3;
Dictyostelium discoideum|Rep: Clathrin-adaptor gamma
chain - Dictyostelium discoideum AX4
Length = 895
Score = 40.7 bits (91), Expect = 0.017
Identities = 17/51 (33%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPA--QGEITQVLRITN--PSRSPLRLRIRVSYNVDGNP 151
L++ +++PS TV+P GE+TQV ++ N + P+ LR+++ + ++G P
Sbjct: 832 LKIQLLAPSSTVIPPNNSGEVTQVSKVLNSQQGQKPILLRLKLDFQINGQP 882
>UniRef50_UPI00015B5E21 Cluster: PREDICTED: similar to golgi
associated, gamma adaptin ear containing, ARF binding
protein 1; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to golgi associated, gamma adaptin ear
containing, ARF binding protein 1 - Nasonia vitripennis
Length = 279
Score = 39.9 bits (89), Expect = 0.029
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +2
Query: 8 RLQLDMMSPSGTVLPAQGE------ITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTE 169
RLQL PS T LPA I+Q++ I NP + L L+ +SY++DG + E E
Sbjct: 217 RLQL----PSTTKLPAHNPFLPPLAISQIMLIANPYKEKLSLKFMLSYSMDGETITEMGE 272
Query: 170 VNSFP 184
V P
Sbjct: 273 VEQLP 277
>UniRef50_Q4T7C6 Cluster: Chromosome undetermined SCAF8147, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF8147,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 574
Score = 39.9 bits (89), Expect = 0.029
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 26 MSPSGTVLPAQGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP 184
++P + P ITQVL + NP + +RLR ++ + + P E EVN FP
Sbjct: 515 LAPFNPISPPAA-ITQVLLLANPLKGKVRLRYKLMFTLGSQPYTEVGEVNDFP 566
>UniRef50_Q4SVR8 Cluster: Chromosome undetermined SCAF13729, whole
genome shotgun sequence; n=5; Euteleostomi|Rep:
Chromosome undetermined SCAF13729, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 668
Score = 39.9 bits (89), Expect = 0.029
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPA------QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ ++ PS + LPA +TQ+L + NP + +RLR ++++N+ E +V
Sbjct: 597 MRVKLLPPSSSELPAFNPIRSPAAVTQILLLANPHKEKVRLRYKLTFNLGDKAHDESGDV 656
Query: 173 NSFPP 187
+ FPP
Sbjct: 657 DQFPP 661
>UniRef50_UPI0000DB70F9 Cluster: PREDICTED: similar to
ADP-ribosylation factor-binding protein GGA1
(Golgi-localized, gamma ear-containing, ARF-binding
protein 1) (Gamma-adaptin-related protein 1); n=1; Apis
mellifera|Rep: PREDICTED: similar to ADP-ribosylation
factor-binding protein GGA1 (Golgi-localized, gamma
ear-containing, ARF-binding protein 1)
(Gamma-adaptin-related protein 1) - Apis mellifera
Length = 594
Score = 39.1 bits (87), Expect = 0.051
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +2
Query: 8 RLQLDMMSPSGTVLPAQGE------ITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTE 169
R + + PSGT LP ITQ++ I NP++ + L+ +SY +D E E
Sbjct: 528 RCKCRLQPPSGTELPGHNPFLPPSAITQIMLIANPTKETVSLKFMLSYTMDDETFTEMGE 587
Query: 170 VNSFP 184
V P
Sbjct: 588 VEKLP 592
>UniRef50_A2A9W7 Cluster: Golgi associated, gamma adaptin ear
containing, ARF binding protein 3; n=5;
Euteleostomi|Rep: Golgi associated, gamma adaptin ear
containing, ARF binding protein 3 - Mus musculus (Mouse)
Length = 640
Score = 37.5 bits (83), Expect = 0.16
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVL----PAQ--GEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT L P Q ITQV+ + NP + +RLR ++++ + E EV
Sbjct: 569 MKVKLQPPSGTELSPFSPIQPPAAITQVMLLANPMKEKVRLRYKLTFALGEQLSTELGEV 628
Query: 173 NSFPP 187
+ FPP
Sbjct: 629 DQFPP 633
>UniRef50_Q9NZ52 Cluster: ADP-ribosylation factor-binding protein
GGA3; n=21; Amniota|Rep: ADP-ribosylation factor-binding
protein GGA3 - Homo sapiens (Human)
Length = 723
Score = 37.1 bits (82), Expect = 0.21
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVL----PAQ--GEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT L P Q ITQV+ + NP + +RLR ++++ + E EV
Sbjct: 652 MKVKLQPPSGTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEV 711
Query: 173 NSFPP 187
+ FPP
Sbjct: 712 DQFPP 716
>UniRef50_A4IGH8 Cluster: Si:ch211-108p22.4 protein; n=6; Danio
rerio|Rep: Si:ch211-108p22.4 protein - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 691
Score = 36.7 bits (81), Expect = 0.27
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 26 MSPSGTVLPAQGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP 184
M+P +P ITQ++ + NP + +R+R ++++ + PV E++ FP
Sbjct: 632 MAPFNPFMPPSS-ITQIMLLANPLKEKVRMRYKLTFILGDQPVTASGEIDQFP 683
>UniRef50_Q6ZQV8 Cluster: CDNA FLJ46861 fis, clone UTERU3011092;
n=3; Homo sapiens|Rep: CDNA FLJ46861 fis, clone
UTERU3011092 - Homo sapiens (Human)
Length = 291
Score = 36.3 bits (80), Expect = 0.36
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 296 IYTCFIICPYINDRNCVLYNCIRISVY*CFIICPYKHLHCTR--YNSLYIGVXLWDLSER 469
+YTC C +I +Y C+ I +Y C +C Y ++H Y +YIG+ + S
Sbjct: 190 MYTCIHRCIFIYT---YVYICVYIHIYICIHVCVYSYIHMYTYVYIHVYIGIHMCVYSYM 246
Query: 470 H 472
H
Sbjct: 247 H 247
>UniRef50_Q4YBB2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 107
Score = 35.9 bits (79), Expect = 0.48
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 296 IYTCFIICPYINDRNCVLYNCIRISVY*CFIICPYKHLHCTRYNSLYI 439
+Y C +C Y+ C +Y C+ + +Y C +C Y ++ Y +Y+
Sbjct: 1 MYVCMYVCMYVCMYVC-MYVCMYVCMYVCMYVCMYVCMYVCMYVCMYV 47
Score = 35.9 bits (79), Expect = 0.48
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 296 IYTCFIICPYINDRNCVLYNCIRISVY*CFIICPYKHLHCTRY 424
+Y C +C Y+ C +Y C+ + +Y C +C Y +H Y
Sbjct: 17 MYVCMYVCMYVCMYVC-MYVCMYVCMYVCMYVCMYACMHACMY 58
Score = 35.1 bits (77), Expect = 0.84
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 296 IYTCFIICPYINDRNCVLYNCIRISVY*CFIICPYKHLHCTRYNSLYI 439
+Y C +C Y+ C +Y C+ + +Y C +C Y ++ + +YI
Sbjct: 13 MYVCMYVCMYVCMYVC-MYVCMYVCMYVCMYVCMYVCMYACMHACMYI 59
Score = 33.1 bits (72), Expect = 3.4
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 296 IYTCFIICPYINDRNCVLYNCIRISVY*CFIICPYKHLHCTRY 424
+Y C +C Y+ C +Y C+ + +Y C C Y ++ C Y
Sbjct: 25 MYVCMYVCMYVCMYVC-MYVCMYVCMYACMHACMYIYIICFLY 66
>UniRef50_A2FD06 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1085
Score = 35.9 bits (79), Expect = 0.48
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +2
Query: 14 QLDMMSPSGTVLPAQGEITQVLRITNPSRSPLRLRIRVSYNVDGN--PVLEQTEVN 175
Q+D+ + TVL A G + + +TNP + L I V +NVD N PVL++ V+
Sbjct: 808 QVDVNIKNLTVLNAGGSVNGKISVTNPLNQEMELNI-VEFNVDANCKPVLKEAAVS 862
>UniRef50_Q9UU81 Cluster: AP-1 complex subunit gamma-1
(Gamma(1)-adaptin); n=1; Schizosaccharomyces pombe|Rep:
AP-1 complex subunit gamma-1 (Gamma(1)-adaptin) -
Schizosaccharomyces pombe (Fission yeast)
Length = 865
Score = 35.9 bits (79), Expect = 0.48
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 41 TVLPAQGEITQVLRITNPSRSPLRLRIRVS-YNVDGNPVLEQTEVNSFPPEL 193
T + GE +Q LR+ PS S ++LR+R+S G+ L+Q + P +L
Sbjct: 812 TSMEPGGETSQTLRVHGPSGSQVKLRLRISVVRQGGSNTLDQVDFGKLPSDL 863
>UniRef50_UPI000065D824 Cluster: ADP-ribosylation factor-binding
protein GGA3 (Golgi-localized, gamma ear-containing,
ARF-binding protein 3).; n=1; Takifugu rubripes|Rep:
ADP-ribosylation factor-binding protein GGA3
(Golgi-localized, gamma ear-containing, ARF-binding
protein 3). - Takifugu rubripes
Length = 612
Score = 35.5 bits (78), Expect = 0.63
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 26 MSPSGTVLPAQGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP 184
++P + P ITQV+ + NP + +RLR ++++ + E EVN FP
Sbjct: 553 LAPFNPIHPPAA-ITQVMLLANPLKVKVRLRYKLTFTLGAQSCTEVGEVNEFP 604
>UniRef50_UPI0000DC0A8F Cluster: UPI0000DC0A8F related cluster; n=4;
Tetrapoda|Rep: UPI0000DC0A8F UniRef100 entry - Rattus
norvegicus
Length = 131
Score = 35.1 bits (77), Expect = 0.84
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 293 SIYTCFIICPYINDRNCV---LYNCIRISVY*CFIICPYKHLHCTRYNSLYIGVXL 451
SIY C + Y++ + +Y C+ + +Y C +C Y ++ + Y S+Y+ + L
Sbjct: 70 SIYVCMYVSIYLSIYLSIYLSIYLCMYVCMYACMYVCMYVCIYLSIYLSIYLSIYL 125
Score = 32.7 bits (71), Expect = 4.5
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 293 SIYTCFIICPYINDRNCVLYNCIRISVY*CFIICPYKHLHCTRYNSLYIGVXL 451
SIY + Y++ +Y I +S+Y C +C Y ++ + Y S+Y+ + L
Sbjct: 6 SIYLSIYLSIYVS-MYLSIYLSIYLSIYLCMYVCMYVCMYVSMYVSIYLSIYL 57
Score = 32.3 bits (70), Expect = 5.9
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +2
Query: 293 SIYTCFIICPYINDRNCVLYNCIRISVY*CFIICPYKHLHCTRYNSLYIGV 445
SIY + Y++ C +Y C+ +Y C +C Y ++ + Y S+Y+ +
Sbjct: 78 SIYLSIYLSIYLSIYLC-MYVCMYACMYVCMYVCIYLSIYLSIYLSIYLSI 127
>UniRef50_A7S1M5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 152
Score = 34.7 bits (76), Expect = 1.1
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 293 SIYTCFIIC--PYINDRNCVLYNCIRISVY*CFIICPYKHLHCTRYNSLYI 439
SIY C I PYI N + C+ IS+Y C I Y+H+ C S+Y+
Sbjct: 77 SIYVCLTISIYPYIASYNKHIL-CLTISIYVCLTISIYRHILCLTI-SIYV 125
>UniRef50_A4H7Q0 Cluster: Hypothetical repeat protein; n=1;
Leishmania braziliensis|Rep: Hypothetical repeat protein
- Leishmania braziliensis
Length = 485
Score = 33.9 bits (74), Expect = 1.9
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +2
Query: 245 DAKRHLSDDK*TISNKSIYTCFIICPYINDRNCVLYNCIRISVY*CFIICPYKHLHCTRY 424
D++RH T +S+Y C C Y C LY C+ +Y C C Y+ L+ Y
Sbjct: 75 DSRRH------TGGKRSLYRCLYRCLYRCLYRC-LYRCLYRCLYRCLYRCLYRCLYRCLY 127
Query: 425 NSLY 436
LY
Sbjct: 128 RCLY 131
Score = 32.3 bits (70), Expect = 5.9
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 290 KSIYTCFIICPYINDRNCVLYNCIRISVY*CFIICPYKHLHCTRYNSLYIG 442
+ +Y C C Y C LY C+ +Y C C Y+ L+ Y LY G
Sbjct: 352 RCLYRCLYRCLYRCLYRC-LYRCLYRCLYRCLYRCLYRCLYRCLYRCLYRG 401
>UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 187
Score = 33.5 bits (73), Expect = 2.6
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 296 IYTCFIICPYINDRNCVLYNCIRISVY*CFIICPYKHLHCTRYNSLYIGVXLWDLSERHV 475
IY C I PYI +Y I +Y C I PY +++ Y +YI + ++ H+
Sbjct: 51 IYICIYIYPYIYIY-IYIYPYIYPYIYICIYIYPYIYIYIYIYPYIYIYIYIYTYIYTHI 109
Query: 476 VI 481
I
Sbjct: 110 YI 111
>UniRef50_A4JQK5 Cluster: Putative uncharacterized protein
precursor; n=1; Burkholderia vietnamiensis G4|Rep:
Putative uncharacterized protein precursor -
Burkholderia vietnamiensis (strain G4 / LMG 22486)
(Burkholderiacepacia (strain R1808))
Length = 771
Score = 33.5 bits (73), Expect = 2.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 238 SLEAVAGRIRHASVEQLRREAVHLRLLQHGVTVHVVR 128
+L A+ G + S R A H+RL QHGV +VVR
Sbjct: 14 ALAALCGSVASGSAHAQRAPASHVRLAQHGVARYVVR 50
>UniRef50_Q6ZTU1 Cluster: CDNA FLJ44225 fis, clone THYMU3006168;
n=2; Homo sapiens|Rep: CDNA FLJ44225 fis, clone
THYMU3006168 - Homo sapiens (Human)
Length = 262
Score = 33.1 bits (72), Expect = 3.4
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 299 YTCFIICPYINDRNCVLYNCIRISVY*CFIICPYKHLHCTRYNSLYIGVXL 451
Y C +C I+ +Y C+ I +Y IC Y ++H RY +YI + +
Sbjct: 170 YVCMCVCSCIH-----VYTCVYIHIYIGMHICVYSYMH--RYTYVYIHIYI 213
>UniRef50_A7AUY9 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 692
Score = 32.3 bits (70), Expect = 5.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 39 EQCCQHRVRSRRSSESLTHPEVHYDYGYACRTTWTVTP 152
+ C + ++SR S H +VH + Y+CR TWT+ P
Sbjct: 537 KNCTDNVIKSRDPEYSHVH-KVHTLWLYSCRATWTMVP 573
>UniRef50_Q8I738 Cluster: TcC31.4; n=1; Trypanosoma cruzi|Rep:
TcC31.4 - Trypanosoma cruzi
Length = 227
Score = 31.9 bits (69), Expect = 7.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 296 IYTCFIICPYINDRNCVLYNCIRISVY*CF 385
IY C+++ YI C +Y CI + +Y CF
Sbjct: 102 IYICYVMYIYIILYCCTIYICISLCIYICF 131
>UniRef50_Q6E6C2 Cluster: Trehalose-6-phosphate phosphatase; n=1;
Antonospora locustae|Rep: Trehalose-6-phosphate
phosphatase - Antonospora locustae (Nosema locustae)
Length = 754
Score = 31.9 bits (69), Expect = 7.8
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -3
Query: 403 FIGTDYKTLVN*YSDTVVQNTVPIVYIGTDNKTRVD*FIRYSSLVVR*MSFRVGESLEAV 224
F G D +N YS+ +V++ + YI +KT + F+R+ +V R + + V S
Sbjct: 211 FPGDDLFNCMN-YSERLVRSLLASSYIEFQSKTSMVNFLRFGKMVYRGLRYTVDSSTIKF 269
Query: 223 AGR-IRHASVEQLRREAVHLRL 161
G+ R+A + E+V R+
Sbjct: 270 EGQETRYAVNRYMTSESVPTRI 291
>UniRef50_Q9Y238 Cluster: Deleted in lung and esophageal cancer
protein 1; n=22; Eutheria|Rep: Deleted in lung and
esophageal cancer protein 1 - Homo sapiens (Human)
Length = 1755
Score = 31.9 bits (69), Expect = 7.8
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = +2
Query: 38 GTVLPAQGEITQVLRITNPSRSPLRLRIRVSYNVDGNP---VLEQTEVNSFPPEL 193
G+ +P + +T+ L +TN RSP+R R + + G+P + ++T + + PP L
Sbjct: 1103 GSAVPLRTRVTRQLILTN--RSPIRTRFSLKFEYFGSPQNSLSKKTSLPNMPPAL 1155
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,863,396
Number of Sequences: 1657284
Number of extensions: 9388525
Number of successful extensions: 22115
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 21416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22078
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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