Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_N01
(483 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y12226-1|CAA72902.1| 825|Homo sapiens gamma-adaptin protein. 64 2e-10
BC036283-1|AAH36283.1| 825|Homo sapiens adaptor-related protein... 64 2e-10
AB015317-1|BAA33389.1| 822|Homo sapiens gamma1-adaptin protein. 64 2e-10
BC051833-1|AAH51833.1| 640|Homo sapiens AP1G2 protein protein. 59 9e-09
AB015318-1|BAA33390.1| 785|Homo sapiens gamma2-adaptin protein. 59 9e-09
Z83844-2|CAB63037.1| 274|Homo sapiens golgi associated, gamma a... 43 5e-04
Z83844-1|CAI20369.1| 639|Homo sapiens golgi associated, gamma a... 43 5e-04
CR456493-1|CAG30379.1| 656|Homo sapiens GGA1 protein. 43 5e-04
BC044629-1|AAH44629.1| 552|Homo sapiens golgi associated, gamma... 43 5e-04
BC000538-1|AAH00538.2| 365|Homo sapiens GGA1 protein protein. 43 5e-04
AL035496-1|CAI20951.1| 639|Homo sapiens golgi associated, gamma... 43 5e-04
AK075256-1|BAC11501.1| 639|Homo sapiens protein ( Homo sapiens ... 43 5e-04
AF233521-1|AAF35393.1| 639|Homo sapiens gamma-adaptin related p... 43 5e-04
AF218584-1|AAF42847.1| 639|Homo sapiens GGA1 protein. 43 5e-04
AF190862-1|AAF05707.1| 639|Homo sapiens ADP-ribosylation factor... 43 5e-04
BC000284-1|AAH00284.1| 613|Homo sapiens golgi associated, gamma... 42 9e-04
AF233522-1|AAF35394.1| 613|Homo sapiens gamma-adaptin related p... 42 9e-04
AF190863-1|AAF05708.1| 613|Homo sapiens ADP-ribosylation factor... 42 9e-04
AF165531-1|AAF42806.1| 613|Homo sapiens VEAR protein protein. 42 9e-04
AC002400-4|AAC05813.1| 613|Homo sapiens Gene product with simil... 42 9e-04
AB029003-1|BAA83032.1| 517|Homo sapiens KIAA1080 protein protein. 42 9e-04
D63876-1|BAA09926.1| 692|Homo sapiens KIAA0154 protein. 37 0.032
BC070044-1|AAH70044.1| 690|Homo sapiens golgi associated, gamma... 37 0.032
AF219139-1|AAF42849.1| 690|Homo sapiens GGA3 short isoform prot... 37 0.032
AF219138-1|AAF42848.1| 723|Homo sapiens GGA3 long isoform protein. 37 0.032
AF190864-1|AAF05709.1| 690|Homo sapiens ADP-ribosylation factor... 37 0.032
AK128694-1|BAC87575.1| 291|Homo sapiens protein ( Homo sapiens ... 36 0.056
AK126213-1|BAC86488.1| 262|Homo sapiens protein ( Homo sapiens ... 33 0.53
AB026898-1|BAA77624.1| 1755|Homo sapiens DLEC1 protein. 32 1.2
AB020522-1|BAA77247.1| 1755|Homo sapiens DLEC1 protein. 32 1.2
>Y12226-1|CAA72902.1| 825|Homo sapiens gamma-adaptin protein.
Length = 825
Score = 64.1 bits (149), Expect = 2e-10
Identities = 27/61 (44%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Frame = +2
Query: 14 QLDMMSPSGTVLPA--QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFPP 187
QL ++SPS +++PA G ITQV+++ NP + LR+RI+++YN G+ + + EVN+FPP
Sbjct: 762 QLQLLSPSSSIVPAFNTGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPP 821
Query: 188 E 190
+
Sbjct: 822 Q 822
>BC036283-1|AAH36283.1| 825|Homo sapiens adaptor-related protein
complex 1, gamma 1 subunit protein.
Length = 825
Score = 64.1 bits (149), Expect = 2e-10
Identities = 27/61 (44%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Frame = +2
Query: 14 QLDMMSPSGTVLPA--QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFPP 187
QL ++SPS +++PA G ITQV+++ NP + LR+RI+++YN G+ + + EVN+FPP
Sbjct: 762 QLQLLSPSSSIVPAFNTGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPP 821
Query: 188 E 190
+
Sbjct: 822 Q 822
>AB015317-1|BAA33389.1| 822|Homo sapiens gamma1-adaptin protein.
Length = 822
Score = 64.1 bits (149), Expect = 2e-10
Identities = 27/61 (44%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Frame = +2
Query: 14 QLDMMSPSGTVLPA--QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFPP 187
QL ++SPS +++PA G ITQV+++ NP + LR+RI+++YN G+ + + EVN+FPP
Sbjct: 759 QLQLLSPSSSIVPAFNTGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPP 818
Query: 188 E 190
+
Sbjct: 819 Q 819
>BC051833-1|AAH51833.1| 640|Homo sapiens AP1G2 protein protein.
Length = 640
Score = 58.8 bits (136), Expect = 9e-09
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPAQG--EITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP 184
LQL + +PSG +PA+G ITQ+ RI NP+++PLRL++R++Y+ V E EVN+ P
Sbjct: 576 LQLQLQAPSGNTVPARGGLPITQLFRILNPNKAPLRLKLRLTYDHFHQSVQEIFEVNNLP 635
Query: 185 PE 190
E
Sbjct: 636 VE 637
>AB015318-1|BAA33390.1| 785|Homo sapiens gamma2-adaptin protein.
Length = 785
Score = 58.8 bits (136), Expect = 9e-09
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPAQG--EITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP 184
LQL + +PSG +PA+G ITQ+ RI NP+++PLRL++R++Y+ V E EVN+ P
Sbjct: 721 LQLQLQAPSGNTVPARGGLPITQLFRILNPNKAPLRLKLRLTYDHFHQSVQEIFEVNNLP 780
Query: 185 PE 190
E
Sbjct: 781 VE 782
>Z83844-2|CAB63037.1| 274|Homo sapiens golgi associated, gamma
adaptin ear containing, ARF binding protein 1 protein.
Length = 274
Score = 43.2 bits (97), Expect = 5e-04
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPA------QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT LPA ITQVL + NP + +RLR ++++ + E +V
Sbjct: 203 MKVKLQPPSGTELPAFNPIVHPSAITQVLLLANPQKEKVRLRYKLTFTMGDQTYNEMGDV 262
Query: 173 NSFPP 187
+ FPP
Sbjct: 263 DQFPP 267
>Z83844-1|CAI20369.1| 639|Homo sapiens golgi associated, gamma
adaptin ear containing, ARF binding protein 1 protein.
Length = 639
Score = 43.2 bits (97), Expect = 5e-04
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPA------QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT LPA ITQVL + NP + +RLR ++++ + E +V
Sbjct: 568 MKVKLQPPSGTELPAFNPIVHPSAITQVLLLANPQKEKVRLRYKLTFTMGDQTYNEMGDV 627
Query: 173 NSFPP 187
+ FPP
Sbjct: 628 DQFPP 632
>CR456493-1|CAG30379.1| 656|Homo sapiens GGA1 protein.
Length = 656
Score = 43.2 bits (97), Expect = 5e-04
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPA------QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT LPA ITQVL + NP + +RLR ++++ + E +V
Sbjct: 585 MKVKLQPPSGTELPAFNPIVHPSAITQVLLLANPQKEKVRLRYKLTFTMGDQTYNEMGDV 644
Query: 173 NSFPP 187
+ FPP
Sbjct: 645 DQFPP 649
>BC044629-1|AAH44629.1| 552|Homo sapiens golgi associated, gamma
adaptin ear containing, ARF binding protein 1 protein.
Length = 552
Score = 43.2 bits (97), Expect = 5e-04
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPA------QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT LPA ITQVL + NP + +RLR ++++ + E +V
Sbjct: 481 MKVKLQPPSGTELPAFNPIVHPSAITQVLLLANPQKEKVRLRYKLTFTMGDQTYNEMGDV 540
Query: 173 NSFPP 187
+ FPP
Sbjct: 541 DQFPP 545
>BC000538-1|AAH00538.2| 365|Homo sapiens GGA1 protein protein.
Length = 365
Score = 43.2 bits (97), Expect = 5e-04
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPA------QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT LPA ITQVL + NP + +RLR ++++ + E +V
Sbjct: 294 MKVKLQPPSGTELPAFNPIVHPSAITQVLLLANPQKEKVRLRYKLTFTMGDQTYNEMGDV 353
Query: 173 NSFPP 187
+ FPP
Sbjct: 354 DQFPP 358
>AL035496-1|CAI20951.1| 639|Homo sapiens golgi associated, gamma
adaptin ear containing, ARF binding protein 1 protein.
Length = 639
Score = 43.2 bits (97), Expect = 5e-04
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPA------QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT LPA ITQVL + NP + +RLR ++++ + E +V
Sbjct: 568 MKVKLQPPSGTELPAFNPIVHPSAITQVLLLANPQKEKVRLRYKLTFTMGDQTYNEMGDV 627
Query: 173 NSFPP 187
+ FPP
Sbjct: 628 DQFPP 632
>AK075256-1|BAC11501.1| 639|Homo sapiens protein ( Homo sapiens
cDNA FLJ90775 fis, clone THYRO1001071, highly similar to
ADP-ribosylation factor binding protein GGA1. ).
Length = 639
Score = 43.2 bits (97), Expect = 5e-04
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPA------QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT LPA ITQVL + NP + +RLR ++++ + E +V
Sbjct: 568 MKVKLQPPSGTELPAFNPIVHPSAITQVLLLANPQKEKVRLRYKLTFTMGDQTYNEMGDV 627
Query: 173 NSFPP 187
+ FPP
Sbjct: 628 DQFPP 632
>AF233521-1|AAF35393.1| 639|Homo sapiens gamma-adaptin related
protein, GGA1 protein.
Length = 639
Score = 43.2 bits (97), Expect = 5e-04
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPA------QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT LPA ITQVL + NP + +RLR ++++ + E +V
Sbjct: 568 MKVKLQPPSGTELPAFNPIVHPSAITQVLLLANPQKEKVRLRYKLTFTMGDQTYNEMGDV 627
Query: 173 NSFPP 187
+ FPP
Sbjct: 628 DQFPP 632
>AF218584-1|AAF42847.1| 639|Homo sapiens GGA1 protein.
Length = 639
Score = 43.2 bits (97), Expect = 5e-04
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPA------QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT LPA ITQVL + NP + +RLR ++++ + E +V
Sbjct: 568 MKVKLQPPSGTELPAFNPIVHPSAITQVLLLANPQKEKVRLRYKLTFTMGDQTYNEMGDV 627
Query: 173 NSFPP 187
+ FPP
Sbjct: 628 DQFPP 632
>AF190862-1|AAF05707.1| 639|Homo sapiens ADP-ribosylation factor
binding protein GGA1 protein.
Length = 639
Score = 43.2 bits (97), Expect = 5e-04
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVLPA------QGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT LPA ITQVL + NP + +RLR ++++ + E +V
Sbjct: 568 MKVKLQPPSGTELPAFNPIVHPSAITQVLLLANPQKEKVRLRYKLTFTMGDQTYNEMGDV 627
Query: 173 NSFPP 187
+ FPP
Sbjct: 628 DQFPP 632
>BC000284-1|AAH00284.1| 613|Homo sapiens golgi associated, gamma
adaptin ear containing, ARF binding protein 2 protein.
Length = 613
Score = 42.3 bits (95), Expect = 9e-04
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +2
Query: 32 PSGTVLPAQGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP 184
P+ + L I+Q+L + NP + P+RLR ++++N G P E EV FP
Sbjct: 555 PAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGEVKDFP 605
>AF233522-1|AAF35394.1| 613|Homo sapiens gamma-adaptin related
protein, GGA2 protein.
Length = 613
Score = 42.3 bits (95), Expect = 9e-04
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +2
Query: 32 PSGTVLPAQGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP 184
P+ + L I+Q+L + NP + P+RLR ++++N G P E EV FP
Sbjct: 555 PAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGEVKDFP 605
>AF190863-1|AAF05708.1| 613|Homo sapiens ADP-ribosylation factor
binding protein GGA2 protein.
Length = 613
Score = 42.3 bits (95), Expect = 9e-04
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +2
Query: 32 PSGTVLPAQGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP 184
P+ + L I+Q+L + NP + P+RLR ++++N G P E EV FP
Sbjct: 555 PAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGEVKDFP 605
>AF165531-1|AAF42806.1| 613|Homo sapiens VEAR protein protein.
Length = 613
Score = 42.3 bits (95), Expect = 9e-04
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +2
Query: 32 PSGTVLPAQGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP 184
P+ + L I+Q+L + NP + P+RLR ++++N G P E EV FP
Sbjct: 555 PAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGEVKDFP 605
>AC002400-4|AAC05813.1| 613|Homo sapiens Gene product with
similarity to KIAA0154 protein.
Length = 613
Score = 42.3 bits (95), Expect = 9e-04
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +2
Query: 32 PSGTVLPAQGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP 184
P+ + L I+Q+L + NP + P+RLR ++++N G P E EV FP
Sbjct: 555 PAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGEVKDFP 605
>AB029003-1|BAA83032.1| 517|Homo sapiens KIAA1080 protein protein.
Length = 517
Score = 42.3 bits (95), Expect = 9e-04
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +2
Query: 32 PSGTVLPAQGEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEVNSFP 184
P+ + L I+Q+L + NP + P+RLR ++++N G P E EV FP
Sbjct: 459 PAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGEVKDFP 509
>D63876-1|BAA09926.1| 692|Homo sapiens KIAA0154 protein.
Length = 692
Score = 37.1 bits (82), Expect = 0.032
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVL----PAQ--GEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT L P Q ITQV+ + NP + +RLR ++++ + E EV
Sbjct: 621 MKVKLQPPSGTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEV 680
Query: 173 NSFPP 187
+ FPP
Sbjct: 681 DQFPP 685
>BC070044-1|AAH70044.1| 690|Homo sapiens golgi associated, gamma
adaptin ear containing, ARF binding protein 3 protein.
Length = 690
Score = 37.1 bits (82), Expect = 0.032
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVL----PAQ--GEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT L P Q ITQV+ + NP + +RLR ++++ + E EV
Sbjct: 619 MKVKLQPPSGTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEV 678
Query: 173 NSFPP 187
+ FPP
Sbjct: 679 DQFPP 683
>AF219139-1|AAF42849.1| 690|Homo sapiens GGA3 short isoform
protein.
Length = 690
Score = 37.1 bits (82), Expect = 0.032
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVL----PAQ--GEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT L P Q ITQV+ + NP + +RLR ++++ + E EV
Sbjct: 619 MKVKLQPPSGTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEV 678
Query: 173 NSFPP 187
+ FPP
Sbjct: 679 DQFPP 683
>AF219138-1|AAF42848.1| 723|Homo sapiens GGA3 long isoform protein.
Length = 723
Score = 37.1 bits (82), Expect = 0.032
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVL----PAQ--GEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT L P Q ITQV+ + NP + +RLR ++++ + E EV
Sbjct: 652 MKVKLQPPSGTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEV 711
Query: 173 NSFPP 187
+ FPP
Sbjct: 712 DQFPP 716
>AF190864-1|AAF05709.1| 690|Homo sapiens ADP-ribosylation factor
binding protein GGA3 protein.
Length = 690
Score = 37.1 bits (82), Expect = 0.032
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 11 LQLDMMSPSGTVL----PAQ--GEITQVLRITNPSRSPLRLRIRVSYNVDGNPVLEQTEV 172
+++ + PSGT L P Q ITQV+ + NP + +RLR ++++ + E EV
Sbjct: 619 MKVKLQPPSGTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEV 678
Query: 173 NSFPP 187
+ FPP
Sbjct: 679 DQFPP 683
>AK128694-1|BAC87575.1| 291|Homo sapiens protein ( Homo sapiens
cDNA FLJ46861 fis, clone UTERU3011092. ).
Length = 291
Score = 36.3 bits (80), Expect = 0.056
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 296 IYTCFIICPYINDRNCVLYNCIRISVY*CFIICPYKHLHCTR--YNSLYIGVXLWDLSER 469
+YTC C +I +Y C+ I +Y C +C Y ++H Y +YIG+ + S
Sbjct: 190 MYTCIHRCIFIYT---YVYICVYIHIYICIHVCVYSYIHMYTYVYIHVYIGIHMCVYSYM 246
Query: 470 H 472
H
Sbjct: 247 H 247
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/62 (19%), Positives = 30/62 (48%)
Frame = +2
Query: 296 IYTCFIICPYINDRNCVLYNCIRISVY*CFIICPYKHLHCTRYNSLYIGVXLWDLSERHV 475
+YTC IC ++ + +Y+ + + Y C + H+ +Y +++ + ++ R +
Sbjct: 139 MYTCIHICVFMCTMHAYVYSYVHMHAYVCVHMYTCVHMCIHKYTCMHMCIHMYTCIHRCI 198
Query: 476 VI 481
I
Sbjct: 199 FI 200
>AK126213-1|BAC86488.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ44225 fis, clone THYMU3006168. ).
Length = 262
Score = 33.1 bits (72), Expect = 0.53
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 299 YTCFIICPYINDRNCVLYNCIRISVY*CFIICPYKHLHCTRYNSLYIGVXL 451
Y C +C I+ +Y C+ I +Y IC Y ++H RY +YI + +
Sbjct: 170 YVCMCVCSCIH-----VYTCVYIHIYIGMHICVYSYMH--RYTYVYIHIYI 213
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 323 YINDRNCVLYNCIRISVY*CFIICPYKHLHCTRYNSLYIGVXLWDLSERH 472
Y R C+ + CI I Y C +C H++ Y +YIG+ + S H
Sbjct: 154 YSYTRICI-HICIFIYTYVCMCVCSCIHVYTCVYIHIYIGMHICVYSYMH 202
>AB026898-1|BAA77624.1| 1755|Homo sapiens DLEC1 protein.
Length = 1755
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = +2
Query: 38 GTVLPAQGEITQVLRITNPSRSPLRLRIRVSYNVDGNP---VLEQTEVNSFPPEL 193
G+ +P + +T+ L +TN RSP+R R + + G+P + ++T + + PP L
Sbjct: 1103 GSAVPLRTRVTRQLILTN--RSPIRTRFSLKFEYFGSPQNSLSKKTSLPNMPPAL 1155
>AB020522-1|BAA77247.1| 1755|Homo sapiens DLEC1 protein.
Length = 1755
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = +2
Query: 38 GTVLPAQGEITQVLRITNPSRSPLRLRIRVSYNVDGNP---VLEQTEVNSFPPEL 193
G+ +P + +T+ L +TN RSP+R R + + G+P + ++T + + PP L
Sbjct: 1103 GSAVPLRTRVTRQLILTN--RSPIRTRFSLKFEYFGSPQNSLSKKTSLPNMPPAL 1155
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,403,175
Number of Sequences: 237096
Number of extensions: 1424194
Number of successful extensions: 2571
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2556
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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