Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_M24
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    26   0.73 
DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.        24   3.9  
AY973195-1|AAY41589.1|   80|Anopheles gambiae defensin 2 protein.      24   3.9  

>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 26.2 bits (55), Expect = 0.73
 Identities = 20/82 (24%), Positives = 38/82 (46%)
 Frame = +1

Query: 313 LFLNITIQKKKKNTSNEIILINILYKLSFETHLI**HITDLNMITGLEVYLTKYSIYFST 492
           +F N T+Q    +  N  I    L K+     ++  ++TD   + G ++ +  +SI+ S 
Sbjct: 102 MFQNTTLQAVLSHLRNNPITDEHLAKVKRGVEIVEMYLTDSPYVAGQKLTIADFSIFVS- 160

Query: 493 KIFFELLHSRFTLLLGQPNIRR 558
             F  L   ++  L   PN++R
Sbjct: 161 --FCSLDMMKYD-LTAYPNVQR 179


>DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.
          Length = 93

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 167 KMYNMISGLTS*YCLKKSIC 108
           KMY +I G T  YC  + +C
Sbjct: 56  KMYCVIKGKTGGYCNSEGLC 75


>AY973195-1|AAY41589.1|   80|Anopheles gambiae defensin 2 protein.
          Length = 80

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 167 KMYNMISGLTS*YCLKKSIC 108
           KMY +I G T  YC  + +C
Sbjct: 43  KMYCVIKGKTGGYCNSEGLC 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,484
Number of Sequences: 2352
Number of extensions: 7325
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)