Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_M23
         (461 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   2.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   2.8  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   4.9  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   6.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   8.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   8.5  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   8.5  

>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 130 ILGEFLEGSYSCVM*QFYSLIHLLFATIL 44
           +LG  +EGS   +  +FY +  +L   IL
Sbjct: 363 MLGNVIEGSSDSINTKFYGMYDILARDIL 391


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -2

Query: 394 NVASNQIYTRLQKNGKGINYRSVRSLH 314
           +++ N+I TRLQ+N   ++ R ++ LH
Sbjct: 218 DLSRNEI-TRLQENSPLLDLRQLQELH 243


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 359 KKWKRDQLPISPIVTYRRRSETMYLYPTC 273
           ++W+  +  +SPI T  +  E  YL   C
Sbjct: 126 ERWRPLRSRLSPIFTSGKLKEMFYLIIEC 154


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 130 ILGEFLEGSYSCVM*QFYSLIHLLFATIL 44
           +LG  +EG+   +  +FY +  +L   IL
Sbjct: 363 MLGNVIEGNSDSINTKFYGMYDILARDIL 391


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 130 ILGEFLEGSYSCVM*QFYSLIHLLFATIL 44
           ILG  +EG+      +FY  I  L   IL
Sbjct: 361 ILGNIIEGNADSYNTEFYGSIDTLARKIL 389


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 130 ILGEFLEGSYSCVM*QFYSLIHLLFATIL 44
           ILG  +EG+      +FY  I  L   IL
Sbjct: 361 ILGNIIEGNADSYNTEFYGSIDTLARKIL 389


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 66  ICYLPLFYANL 34
           IC+LP F  NL
Sbjct: 346 ICWLPFFVVNL 356


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,804
Number of Sequences: 438
Number of extensions: 2807
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)