Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_M17
         (546 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.3  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 362 WSCCVGLEDSDVPFSCDLTVEY 297
           +S CV  E S   F C  TVEY
Sbjct: 133 YSICVQTEKSVFDFLCRHTVEY 154


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/25 (28%), Positives = 11/25 (44%)
 Frame = +1

Query: 10  PEDKNQNSSGNSSTNADKSSSKDGN 84
           P D   N+S  +     ++S   GN
Sbjct: 393 PNDNRNNTSSRAQGETSRNSKNSGN 417


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 10/53 (18%), Positives = 21/53 (39%)
 Frame = +2

Query: 290  NHNILRLNHKKTAHQNLPVPHNNSNRIHNRLKREXXXXXXXXRIVIAARRKIT 448
            N+N++  NH+ +   ++P      N   N+   E         + +  R  +T
Sbjct: 1498 NNNVVARNHRNSVASSIPAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNNVT 1550


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 10/53 (18%), Positives = 21/53 (39%)
 Frame = +2

Query: 290  NHNILRLNHKKTAHQNLPVPHNNSNRIHNRLKREXXXXXXXXRIVIAARRKIT 448
            N+N++  NH+ +   ++P      N   N+   E         + +  R  +T
Sbjct: 1498 NNNVVARNHRNSVASSIPAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNNVT 1550


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 10/53 (18%), Positives = 21/53 (39%)
 Frame = +2

Query: 290  NHNILRLNHKKTAHQNLPVPHNNSNRIHNRLKREXXXXXXXXRIVIAARRKIT 448
            N+N++  NH+ +   ++P      N   N+   E         + +  R  +T
Sbjct: 1498 NNNVVARNHRNSVASSIPAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNNVT 1550


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 10/53 (18%), Positives = 21/53 (39%)
 Frame = +2

Query: 290  NHNILRLNHKKTAHQNLPVPHNNSNRIHNRLKREXXXXXXXXRIVIAARRKIT 448
            N+N++  NH+ +   ++P      N   N+   E         + +  R  +T
Sbjct: 1498 NNNVVARNHRNSVASSIPAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNNVT 1550


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.126    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,911
Number of Sequences: 336
Number of extensions: 1444
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)