Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_M14
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.3  
AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical prote...    23   9.2  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    23   9.2  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 361 ETKPKPDDKVKADEKTPEPKSAEPKPTDVP 450
           E++ +   K +A+ KTPE  S +P   +VP
Sbjct: 616 ESRSRSTSKQRANAKTPETPSDQPLIKEVP 645


>AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical protein
           protein.
          Length = 92

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 394 ADEKTPEPKSAEPKPTDVP 450
           ADE +PE K  + +PT+ P
Sbjct: 56  ADEPSPERKVQKLEPTEAP 74


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 389 TLSSGFGFVSSGCL 348
           T+ +GFG + SGC+
Sbjct: 56  TMQTGFGMLESGCV 69


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.127    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,667
Number of Sequences: 2352
Number of extensions: 10050
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)