Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_M14
         (696 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   2.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.4  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   6.4  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   8.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.5  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 389 TLSSGFGFVSSGCL 348
           T+ +GFG + SGC+
Sbjct: 43  TMQTGFGMLESGCV 56


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 240 FSGFCVSYRSRLSNQFLFFISD 175
           +SG+ +++   L N+ ++FI D
Sbjct: 205 YSGWYLNHDYNLENKLIYFIED 226


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 669  YGFGGNMFRRSVMSYRSIGFCGA 601
            YG  G++ RRSV S R+I   G+
Sbjct: 1834 YGSRGSVGRRSVGSARNIPVSGS 1856


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 151 AAVTIAKPVADEKQELVAQPTSVADTKT 234
           AA+ IAK + +EK+ ++  P  + +  T
Sbjct: 314 AALKIAKDIPEEKRMVIILPDGIRNYLT 341


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 638 PS*VTGASGFVALPTSMGLSGEADFSETSVGTSF 537
           P+ V+  SGF  +P     S ++ FS+ ++  SF
Sbjct: 111 PAAVSYTSGFYHIPVIGISSRDSAFSDKNIHVSF 144


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 338 KLRPNTLKRQNQNQMIKSKQMKRHLNLNLQNQSLPTFL 451
           ++ PN LK  +++Q+IK        +   Q  + P FL
Sbjct: 474 QISPNELKPNDKSQVIKQNTWTVFRDAITQTGTGPAFL 511


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.127    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,609
Number of Sequences: 438
Number of extensions: 2659
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)