Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_M13
         (495 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   6.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.1  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -2

Query: 227 ESANRLTNNLRLYKCNL*CNAAPVAVCLCVY 135
           +S NR+   + +  C +  N    A C C Y
Sbjct: 528 DSVNRIFGFIIIIGCLIQFNTIVFAFCYCYY 558


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 275 VIIRLGCVRAWPAPNEESANRLTNNLRLY 189
           VII +GC+  W   N+ +  R  +N  ++
Sbjct: 48  VIITIGCLCIWSIFNKWNQFRSYSNFSVF 76


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 230 RSAPATHARNLNELSHII 283
           RSAP+TH   L  L  ++
Sbjct: 106 RSAPSTHEELLEVLKKVV 123


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 339 VGRGGVAETCGSAGRP 386
           +G  GV+  CG++G P
Sbjct: 219 LGSMGVSVPCGTSGNP 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,079
Number of Sequences: 336
Number of extensions: 1668
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)