Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_M12
         (575 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   279   1e-75
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   279   1e-75
AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...    52   7e-07
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...    52   7e-07

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  279 bits (685), Expect = 1e-75
 Identities = 128/148 (86%), Positives = 143/148 (96%)
 Frame = +3

Query: 9   VQEARREPIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLL 188
           +Q+ RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLL
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 189 GKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRS 368
           GKEKF+GVDIRV V GGGHVAQ+YAIRQAISKAL+AFYQKYVDEASKKEIKDILVQYDR+
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRT 120

Query: 369 LLVADPRRCEPKKFGGPGARARYQKSYR 452
           LLV DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 121 LLVGDPRRCEPKKFGGPGARARYQKSYR 148


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  279 bits (685), Expect = 1e-75
 Identities = 128/148 (86%), Positives = 143/148 (96%)
 Frame = +3

Query: 9   VQEARREPIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLL 188
           +Q+ RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLL
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 189 GKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRS 368
           GKEKF+GVDIRV V GGGHVAQ+YAIRQAISKAL+AFYQKYVDEASKKEIKDILVQYDR+
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRT 120

Query: 369 LLVADPRRCEPKKFGGPGARARYQKSYR 452
           LLV DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 121 LLVGDPRRCEPKKFGGPGARARYQKSYR 148


>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score = 51.6 bits (118), Expect = 7e-07
 Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
 Frame = +3

Query: 6   RVQEARREPIQAVQVFGRKKTATA-VAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPIL 182
           R+ E  R+ I   +    +KTA A V     G G + +NG+ +   E    + +L  P+ 
Sbjct: 260 RIDEEGRQYITTYECL--RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQ 317

Query: 183 LLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYD 362
               E    VD+   V+GGG   Q  AIR  I+ +L +F  + + E+ +           
Sbjct: 318 F--SELLGKVDVEANVEGGGPSGQAGAIRWGIAMSLRSFVDQEMIESMRL---------- 365

Query: 363 RSLLVADPRRCEPKKFGGPGARARY 437
             LL  D RR E KKFG  GAR +Y
Sbjct: 366 AGLLTRDYRRRERKKFGQEGARRKY 390


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score = 51.6 bits (118), Expect = 7e-07
 Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
 Frame = +3

Query: 6   RVQEARREPIQAVQVFGRKKTATA-VAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPIL 182
           R+ E  R+ I   +    +KTA A V     G G + +NG+ +   E    + +L  P+ 
Sbjct: 260 RIDEEGRQYITTYECL--RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQ 317

Query: 183 LLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYD 362
               E    VD+   V+GGG   Q  AIR  I+ +L +F  + + E+ +           
Sbjct: 318 F--SELLGKVDVEANVEGGGPSGQAGAIRWGIAMSLRSFVDQEMIESMRL---------- 365

Query: 363 RSLLVADPRRCEPKKFGGPGARARY 437
             LL  D RR E KKFG  GAR +Y
Sbjct: 366 AGLLTRDYRRRERKKFGQEGARRKY 390


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,503,576
Number of Sequences: 53049
Number of extensions: 604102
Number of successful extensions: 1462
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1460
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)