Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_M10
         (435 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1YJ58 Cluster: Putative uncharacterized protein; n=1; ...    34   1.5  
UniRef50_UPI00006CBA97 Cluster: TPR Domain containing protein; n...    32   6.0  
UniRef50_Q8IKF7 Cluster: Putative uncharacterized protein; n=8; ...    31   8.0  

>UniRef50_A1YJ58 Cluster: Putative uncharacterized protein; n=1;
           Spodoptera frugiperda MNPV|Rep: Putative uncharacterized
           protein - Spodoptera frugiperda nuclear polyhedrosis
           virus (SfNPV)
          Length = 151

 Score = 33.9 bits (74), Expect = 1.5
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = -1

Query: 357 IQNRPK*LHPARNITSYTYINIFM--EIANDYNPPFSKILI*FQKYTVARTSIEHSNMLP 184
           +QN    ++ AR + +Y Y +IF   E    YN P S  +  F+K    R +++  N+ P
Sbjct: 23  LQNLKNEINEARYLPNYNYNDIFYDRETGKTYNCPRSCPVFSFKKQKCVRGNLQAYNVCP 82

Query: 183 KNVFIYLR 160
            N F  +R
Sbjct: 83  SNKFGNIR 90


>UniRef50_UPI00006CBA97 Cluster: TPR Domain containing protein; n=1;
           Tetrahymena thermophila SB210|Rep: TPR Domain containing
           protein - Tetrahymena thermophila SB210
          Length = 460

 Score = 31.9 bits (69), Expect = 6.0
 Identities = 12/43 (27%), Positives = 28/43 (65%)
 Frame = -1

Query: 297 NIFMEIANDYNPPFSKILI*FQKYTVARTSIEHSNMLPKNVFI 169
           NI+ +I   Y P +SK++I   KY +++ +++ + +L +N+ +
Sbjct: 271 NIYSDIEEQYQPDYSKLII-QSKYLISQNNLKEAEILLENLIL 312


>UniRef50_Q8IKF7 Cluster: Putative uncharacterized protein; n=8;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1966

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
 Frame = -1

Query: 306 TYINIFMEIANDYNPPFSKILI*FQKYTVARTSIEHSNM---LPKNVFIYLRTLNTSLL* 136
           TY N   E  ND    + K +  F KY   R   EH+N+   L K++F+Y   LN  +  
Sbjct: 67  TYYNKAHE-ENDKVKVYEKEIQNFYKYDKLRYVDEHNNICCNLIKDIFLYGVNLNVDIFI 125

Query: 135 IIDYSFSFFLQ 103
           + + +  FFLQ
Sbjct: 126 LKNSNIIFFLQ 136


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,426,603
Number of Sequences: 1657284
Number of extensions: 7587532
Number of successful extensions: 14284
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14283
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)