Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_M10
         (435 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   1.1  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   1.1  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   1.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   6.0  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -1

Query: 273 DYNPPFSKILI*FQKYTVARTSIEHSNMLP-KNVFIYLRTLNTSL 142
           DY+P F+K+ I  + YT A+  I    + P  N   Y    +TSL
Sbjct: 232 DYDPKFTKMTIDGESYT-AQDGISGMALSPMTNNLYYSPVASTSL 275


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -1

Query: 273 DYNPPFSKILI*FQKYTVARTSIEHSNMLP-KNVFIYLRTLNTSL 142
           DY+P F+K+ I  + YT A+  I    + P  N   Y    +TSL
Sbjct: 232 DYDPKFTKMTIDGESYT-AQDGISGMALSPMTNNLYYSPVASTSL 275


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -1

Query: 273 DYNPPFSKILI*FQKYTVARTSIEHSNMLP-KNVFIYLRTLNTSL 142
           DY+P F+K+ I  + YT A+  I    + P  N   Y    +TSL
Sbjct: 232 DYDPKFTKMTIDGESYT-AQDGISGMALSPMTNNLYYSPVASTSL 275


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 435 HHTHI*QLLSRVAC 394
           HH+H+   L R AC
Sbjct: 286 HHSHLSSALGRSAC 299


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,613
Number of Sequences: 438
Number of extensions: 2636
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)