Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_M08
(413 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70207-2|CAA94130.2| 635|Caenorhabditis elegans Hypothetical pr... 29 1.8
AJ512338-1|CAD54511.1| 635|Caenorhabditis elegans trehalase pro... 29 1.8
Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z82055-7|CAB04849.1| 387|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z81119-3|CAB03334.1| 550|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z73905-5|CAD44103.1| 175|Caenorhabditis elegans Hypothetical pr... 27 7.1
AF535153-1|AAN17799.1| 175|Caenorhabditis elegans putative tran... 27 7.1
Z83116-11|CAM84819.1| 278|Caenorhabditis elegans Hypothetical p... 26 9.4
Z81524-7|CAD54142.2| 597|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z81050-15|CAN86587.1| 597|Caenorhabditis elegans Hypothetical p... 26 9.4
>Z70207-2|CAA94130.2| 635|Caenorhabditis elegans Hypothetical
protein F15A2.2 protein.
Length = 635
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -3
Query: 207 WSQTSQHITKPIMHGHNTYEQILLSYFFIIPKHSYDVFF 91
W + ++ T + H + Y I + FI+P +DV+F
Sbjct: 151 WERLARQFTSDVQHHPDLYPLIPVQNPFIVPGGRFDVYF 189
>AJ512338-1|CAD54511.1| 635|Caenorhabditis elegans trehalase
protein.
Length = 635
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -3
Query: 207 WSQTSQHITKPIMHGHNTYEQILLSYFFIIPKHSYDVFF 91
W + ++ T + H + Y I + FI+P +DV+F
Sbjct: 151 WERLARQFTSDVQHHPDLYPLIPVQNPFIVPGGRFDVYF 189
>Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical
protein F14F3.2 protein.
Length = 670
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 14 HGILSYH*NYSFFFIYFVN*SYYFCMKKTSYE 109
HG LS H Y FFF F S++ C +K ++
Sbjct: 212 HGQLS-HRIYEFFFYVFDRFSFFMCNRKADHK 242
>Z82055-7|CAB04849.1| 387|Caenorhabditis elegans Hypothetical
protein T26H2.8 protein.
Length = 387
Score = 27.1 bits (57), Expect = 5.4
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +2
Query: 167 CMMGLVIC*LVCDQSLHYVTIVIKPVCVNTCVI 265
CM+GL+IC ++ +L Y +++ ++T +
Sbjct: 281 CMIGLMICCIIISSNLMYPPALVQEAMLHTSTV 313
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 26.6 bits (56), Expect = 7.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 100 IIRMFWDDKKIRKKYLFICIV 162
I R+FW K R++ +F CI+
Sbjct: 2170 ITRLFWSPKSHRERMMFECII 2190
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 26.6 bits (56), Expect = 7.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 100 IIRMFWDDKKIRKKYLFICIV 162
I R+FW K R++ +F CI+
Sbjct: 2170 ITRLFWSPKSHRERMMFECII 2190
>Z81119-3|CAB03334.1| 550|Caenorhabditis elegans Hypothetical
protein T10H4.4 protein.
Length = 550
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 146 CSYVLCPCMMGLVIC*LVCDQSLHYVTIVIKPVCVN 253
C +L P C++ +HYVTIVI CVN
Sbjct: 419 CLEILNPEKHNFYFADFYCNREMHYVTIVI---CVN 451
>Z73905-5|CAD44103.1| 175|Caenorhabditis elegans Hypothetical
protein C32C4.5a protein.
Length = 175
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +2
Query: 80 YFCMKKTSYECFGMIKK*ERSICSYVLCPCMM 175
Y C ++ F KK + C Y CPC +
Sbjct: 6 YMCQLCANHGIFNQPKKGHKQKCPYRTCPCSL 37
>AF535153-1|AAN17799.1| 175|Caenorhabditis elegans putative
transcription factor MAB-23 protein.
Length = 175
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +2
Query: 80 YFCMKKTSYECFGMIKK*ERSICSYVLCPCMM 175
Y C ++ F KK + C Y CPC +
Sbjct: 6 YMCQLCANHGIFNQPKKGHKQKCPYRTCPCSL 37
>Z83116-11|CAM84819.1| 278|Caenorhabditis elegans Hypothetical
protein M01B2.12 protein.
Length = 278
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 146 CSYVLCPCMMGLVIC*LVCDQSLHYVTIVI 235
C VL P L C++ +HYVT+V+
Sbjct: 159 CISVLHPERHNLYFADFYCNKEIHYVTVVV 188
>Z81524-7|CAD54142.2| 597|Caenorhabditis elegans Hypothetical
protein F32H5.7 protein.
Length = 597
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 310 NGFER*TTTNSYVYCNNTCIYTYGFNN 230
+GFE+ TTT++ ++C T I T G+ N
Sbjct: 159 DGFEQWTTTDAILFC-FTVITTIGYGN 184
>Z81050-15|CAN86587.1| 597|Caenorhabditis elegans Hypothetical
protein F32H5.7 protein.
Length = 597
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 310 NGFER*TTTNSYVYCNNTCIYTYGFNN 230
+GFE+ TTT++ ++C T I T G+ N
Sbjct: 159 DGFEQWTTTDAILFC-FTVITTIGYGN 184
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,042,905
Number of Sequences: 27780
Number of extensions: 191417
Number of successful extensions: 412
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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