Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_M07
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    26   0.73 
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          25   2.2  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   3.9  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           23   9.0  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           23   9.0  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    23   9.0  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 26.2 bits (55), Expect = 0.73
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -3

Query: 336 PGNHGKLHRLSVAYRTHSLARVVSD--YRSLMYKHIFFGVIPIDETISTLDVEP 181
           PG+HG  H +  A  T     +  +  YR+   +H+  G   IDE +  + V P
Sbjct: 392 PGSHGSFHEIGRAMATLMSDEIFHEVAYRAKRREHLLAG---IDEFLDAVTVLP 442


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = -3

Query: 537 PLCTPLIGWRSTAPDTTS--AWG 475
           P+   L+GWR  +PD ++   WG
Sbjct: 7   PIVKRLLGWRKVSPDDSAEGKWG 29


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 525 PLIGWRSTAPDTTSAWGSFTTTSPT 451
           P I W +  P ++ A+ S T   PT
Sbjct: 230 PSISWSTADPSSSPAYSSITHYEPT 254


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 507 STAPDTTSAWGSFTTTSPTLTW 442
           ++AP T S W   T T+ T  W
Sbjct: 137 TSAPTTPSQWTDPTITTTTPVW 158


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 507 STAPDTTSAWGSFTTTSPTLTW 442
           ++AP T S W   T T+ T  W
Sbjct: 137 TSAPTTPSQWTDPTITTTTPVW 158


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 507 STAPDTTSAWGSFTTTSPTLTW 442
           ++AP T S W   T T+ T  W
Sbjct: 138 TSAPTTPSQWTDPTITTTTPVW 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,607
Number of Sequences: 2352
Number of extensions: 8652
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)