Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_M07
(560 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061440-1|AAL28988.1| 352|Drosophila melanogaster LD37574p pro... 162 3e-40
AE014296-2093|AAF49961.3| 352|Drosophila melanogaster CG5654-PA... 162 3e-40
U49120-1|AAB94634.1| 359|Drosophila melanogaster Y-box protein ... 155 3e-38
AY118360-1|AAM48389.1| 195|Drosophila melanogaster RE05342p pro... 66 4e-11
AF521096-1|AAM77748.1| 195|Drosophila melanogaster RNA-binding ... 66 4e-11
AE014296-983|AAF50758.2| 195|Drosophila melanogaster CG17334-PA... 66 4e-11
AY060441-1|AAL25480.1| 143|Drosophila melanogaster LD47312p pro... 32 0.46
AE014296-2798|AAN11740.1| 143|Drosophila melanogaster CG9705-PB... 32 0.46
AE014296-2797|AAF49414.1| 143|Drosophila melanogaster CG9705-PA... 32 0.46
AE013599-3457|AAF46894.2| 1227|Drosophila melanogaster CG30268-P... 30 1.9
AY113377-1|AAM29382.1| 431|Drosophila melanogaster RE01730p pro... 30 2.5
AE013599-3358|AAM68213.1| 431|Drosophila melanogaster CG3074-PB... 30 2.5
AE013599-3357|AAF46818.2| 431|Drosophila melanogaster CG3074-PA... 30 2.5
AE014297-4066|AAF56664.3| 979|Drosophila melanogaster CG6124-PA... 29 4.3
AY060922-1|AAL28470.1| 430|Drosophila melanogaster GM06507p pro... 29 5.7
AE013599-2963|AAF57510.1| 407|Drosophila melanogaster CG16898-P... 28 7.5
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P... 28 9.9
>AY061440-1|AAL28988.1| 352|Drosophila melanogaster LD37574p
protein.
Length = 352
Score = 162 bits (393), Expect = 3e-40
Identities = 75/93 (80%), Positives = 83/93 (89%)
Frame = +1
Query: 148 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 327
VIA KV+GTVKWFNVKSGYGFINRNDT+EDVFVHQ+AI RNNP+KAVRSVGDGE VEF V
Sbjct: 57 VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDV 116
Query: 328 VAGEKGYEAARVTGPGGESVKGSPYAADKRRSY 426
V GEKG EAA VTGP GE V+GS +AADKRR++
Sbjct: 117 VIGEKGNEAANVTGPSGEPVRGSQFAADKRRNF 149
>AE014296-2093|AAF49961.3| 352|Drosophila melanogaster CG5654-PA
protein.
Length = 352
Score = 162 bits (393), Expect = 3e-40
Identities = 75/93 (80%), Positives = 83/93 (89%)
Frame = +1
Query: 148 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 327
VIA KV+GTVKWFNVKSGYGFINRNDT+EDVFVHQ+AI RNNP+KAVRSVGDGE VEF V
Sbjct: 57 VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDV 116
Query: 328 VAGEKGYEAARVTGPGGESVKGSPYAADKRRSY 426
V GEKG EAA VTGP GE V+GS +AADKRR++
Sbjct: 117 VIGEKGNEAANVTGPSGEPVRGSQFAADKRRNF 149
>U49120-1|AAB94634.1| 359|Drosophila melanogaster Y-box protein
protein.
Length = 359
Score = 155 bits (377), Expect = 3e-38
Identities = 74/93 (79%), Positives = 82/93 (88%)
Frame = +1
Query: 148 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 327
VIA KV+GTVKWFNVKSGYGFINRNDT+EDVFVHQ+AI NNP+KAVRSVGDGE VEF V
Sbjct: 58 VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIA-NNPKKAVRSVGDGEVVEFDV 116
Query: 328 VAGEKGYEAARVTGPGGESVKGSPYAADKRRSY 426
V GEKG EAA VTGP GE V+GS +AADKRR++
Sbjct: 117 VIGEKGNEAANVTGPSGEPVRGSQFAADKRRNF 149
>AY118360-1|AAM48389.1| 195|Drosophila melanogaster RE05342p
protein.
Length = 195
Score = 65.7 bits (153), Expect = 4e-11
Identities = 34/78 (43%), Positives = 44/78 (56%)
Frame = +1
Query: 169 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAVVAGEKGY 348
G KWFNV G+GF+ ND ++VFVHQ+ I RS+G+ E VEF +G
Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVI----QMSGFRSLGEQEEVEFECQRTSRGL 96
Query: 349 EAARVTGPGGESVKGSPY 402
EA RV+ G S +GS Y
Sbjct: 97 EATRVSSRHGGSCQGSTY 114
>AF521096-1|AAM77748.1| 195|Drosophila melanogaster RNA-binding
protein LIN-28 protein.
Length = 195
Score = 65.7 bits (153), Expect = 4e-11
Identities = 34/78 (43%), Positives = 44/78 (56%)
Frame = +1
Query: 169 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAVVAGEKGY 348
G KWFNV G+GF+ ND ++VFVHQ+ I RS+G+ E VEF +G
Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVI----QMSGFRSLGEQEEVEFECQRTSRGL 96
Query: 349 EAARVTGPGGESVKGSPY 402
EA RV+ G S +GS Y
Sbjct: 97 EATRVSSRHGGSCQGSTY 114
>AE014296-983|AAF50758.2| 195|Drosophila melanogaster CG17334-PA
protein.
Length = 195
Score = 65.7 bits (153), Expect = 4e-11
Identities = 34/78 (43%), Positives = 44/78 (56%)
Frame = +1
Query: 169 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAVVAGEKGY 348
G KWFNV G+GF+ ND ++VFVHQ+ I RS+G+ E VEF +G
Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVI----QMSGFRSLGEQEEVEFECQRTSRGL 96
Query: 349 EAARVTGPGGESVKGSPY 402
EA RV+ G S +GS Y
Sbjct: 97 EATRVSSRHGGSCQGSTY 114
>AY060441-1|AAL25480.1| 143|Drosophila melanogaster LD47312p
protein.
Length = 143
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 163 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 261
V+G VK F+ G+GFI N EDVF H + I
Sbjct: 55 VTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDI 87
>AE014296-2798|AAN11740.1| 143|Drosophila melanogaster CG9705-PB,
isoform B protein.
Length = 143
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 163 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 261
V+G VK F+ G+GFI N EDVF H + I
Sbjct: 55 VTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDI 87
>AE014296-2797|AAF49414.1| 143|Drosophila melanogaster CG9705-PA,
isoform A protein.
Length = 143
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 163 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 261
V+G VK F+ G+GFI N EDVF H + I
Sbjct: 55 VTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDI 87
>AE013599-3457|AAF46894.2| 1227|Drosophila melanogaster CG30268-PA
protein.
Length = 1227
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3
Query: 264 DYRSLMYKHIFFGV-IPIDETISTLDVEPFDSTRNLFS 154
+YR L Y H F G+ +P D + + +EP +NLF+
Sbjct: 599 NYRELYYIHFFSGISLPNDLMYNMMPIEPRRMKKNLFN 636
>AY113377-1|AAM29382.1| 431|Drosophila melanogaster RE01730p
protein.
Length = 431
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 414 TPQLPSSILPTSRWGTWW*RSPTQRWCRAPW 506
T LPSS +W ++ P Q WC A W
Sbjct: 184 TDGLPSSFNALDKWSSYISEVPDQGWCGASW 214
>AE013599-3358|AAM68213.1| 431|Drosophila melanogaster CG3074-PB,
isoform B protein.
Length = 431
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 414 TPQLPSSILPTSRWGTWW*RSPTQRWCRAPW 506
T LPSS +W ++ P Q WC A W
Sbjct: 184 TDGLPSSFNALDKWSSYISEVPDQGWCGASW 214
>AE013599-3357|AAF46818.2| 431|Drosophila melanogaster CG3074-PA,
isoform A protein.
Length = 431
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 414 TPQLPSSILPTSRWGTWW*RSPTQRWCRAPW 506
T LPSS +W ++ P Q WC A W
Sbjct: 184 TDGLPSSFNALDKWSSYISEVPDQGWCGASW 214
>AE014297-4066|AAF56664.3| 979|Drosophila melanogaster CG6124-PA
protein.
Length = 979
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -3
Query: 549 LTLIPLCTP-LIGWRSTAPDTTSAWGSFTTTSPTLTWVVLTMVAAAFVSCI 400
L +P+C P + P + W + L WV +T+V+ AF+ I
Sbjct: 891 LICLPICEPECLNGLCEFPGSCVCWDGHEKSERHLKWVFITIVSMAFILAI 941
>AY060922-1|AAL28470.1| 430|Drosophila melanogaster GM06507p
protein.
Length = 430
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 414 TPQLPSSILPTSRWGTWW*RSPTQRWCRAPW 506
T LP+S +W ++ P Q WC A W
Sbjct: 184 TDGLPNSFNALDKWSSYISEVPDQGWCGASW 214
>AE013599-2963|AAF57510.1| 407|Drosophila melanogaster CG16898-PA
protein.
Length = 407
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +2
Query: 377 VNPSRVHLMQLTNAAATIVNTTHVKVGDVVVKEPHAEVVSGAVDLHPIKGVHKG 538
VN RV + L + T+ +VVK+ H E+++ ++ +H +KG
Sbjct: 138 VNADRVKQLDLAHTKLTLEVLAKFHAASIVVKQRHPELLTKSLFIHCFSRDNKG 191
>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
protein.
Length = 4129
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/18 (61%), Positives = 12/18 (66%), Gaps = 3/18 (16%)
Frame = +3
Query: 459 TWW*---RSPTQRWCRAP 503
TWW R+ T RWCRAP
Sbjct: 24 TWWRSTSRASTSRWCRAP 41
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,397,983
Number of Sequences: 53049
Number of extensions: 366320
Number of successful extensions: 1250
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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