Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_M06
         (189 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    19   4.1  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            19   4.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    18   9.5  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 6/31 (19%)
 Frame = +1

Query: 10  NSARVERTSSRVFLL------LIFSKYMRKK 84
           N   ++R+++ +++L      L+FSKY  KK
Sbjct: 349 NDLSIDRSTNTMYVLSDNFQQLLFSKYDAKK 379


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -1

Query: 75 HVLRKNQQQKNSRASSLHSCRIHCS 1
          H L+K +++KN   + +    + CS
Sbjct: 4  HQLKKKRRKKNLNQNQMMIWALDCS 28


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 90  INFFSHVLRKNQQQKNS 40
           I F    LRK  Q+K+S
Sbjct: 611 IPFLERELRKAHQEKDS 627


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,197
Number of Sequences: 438
Number of extensions: 391
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 42
effective length of database: 127,947
effective search space used:  2558940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)